mRNA_S-firma_F_contig1006.125.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1006.125.1
Unique NamemRNA_S-firma_F_contig1006.125.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig1006.125.1 vs. uniprot
Match: D8LC77_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC77_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 2.870e-114
Identity = 226/355 (63.66%), Postives = 255/355 (71.83%), Query Frame = -1
Query:  608 MLNLGKQENKGGIPAAGGARGASSSGRSGWEEVQEERKDEGPSLMEQMXXXXXXXXXXXXXXXXXXXLRDTKRSFGGGLKKGFLSQRAVPTPSSTARKGKKGEXXXXXXXXXXXXEGASSVVLESMPVITG-KAAPSGLEFDVSAEANS--SADLVLPEVQEAMKPSAADRLGGTSGAGG-QGWLTPELLKEIAEKPRLAAMLTDPRFTKAMQLMSTSPQDALAMFSSSPEARESFTELMSLLSKHFTTMGEAADKKAAAEEADRKRVAEGPLAQEALRRAEAGVGVAATPATTEEAATVEKVLQQPELREXXXXXXXXXXXQECGDPRALARYMQHPDFGPKLQLMANAGLISF 1660
            ML LGKQ +K G        G +S  R  W  + EERK +GPSLMEQM                    RD K++FGGGLKKGFLS+    T  S+A       XXXXXX       GA   V  S+PVITG KA+  GLEFDVSAEA+S  S  L+LPEVQEAMK SA++ LGG SG GG Q WLTPELL++I+EKPRLAAMLTDPRF+KAM+LMSTSP+DAL MF SS EARESFTELMSLLSKHFT MG+AAD+KAAAEEADR+RVA+GPLAQEALRRA  GVGVAATPAT EE ATV+KVLQQPELRE           QECG+P+ LARYM+HP+FGPKLQLMA AGLISF
Sbjct:    1 MLKLGKQGSKDGA-------GVASRERLDWGALDEERKQKGPSLMEQMMAEAMAAKEVKSQEQRLEQSRDAKQTFGGGLKKGFLSRPTRTTAVSSAXXXXX-XXXXXXXRGKESTSGAPPEVEGSIPVITGRKASSGGLEFDVSAEASSTTSDSLLLPEVQEAMKHSASNPLGGASGGGGGQEWLTPELLQKISEKPRLAAMLTDPRFSKAMELMSTSPKDALGMFESSAEARESFTELMSLLSKHFTAMGDAADEKAAAEEADRRRVADGPLAQEALRRAAEGVGVAATPATAEETATVDKVLQQPELRELLMDPGMQRVLQECGEPQELARYMRHPEFGPKLQLMAKAGLISF 347          
BLAST of mRNA_S-firma_F_contig1006.125.1 vs. uniprot
Match: A0A024UTJ1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTJ1_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.870e-16
Identity = 90/319 (28.21%), Postives = 141/319 (44.20%), Query Frame = -1
Query:  614 EEVQEERKDEGPSLMEQMXXXXXXXXXXXXXXXXXXXLRDTKRSFGGGLKKGFLSQRAVPTPSSTARKGKKGEXXXXXXXXXXXXEGASSVVLESMPVITGKAAPSGLEFDVSAEANSSADLVLPEVQEAMKPSAADRLGGTSGAGGQGWLTPELLKEIAEKPRLAAMLTDPRFTKAMQLMSTSPQDALAMFSSSPEARESFTELMSLLSKHFTTMGEAADKKAAAEEADRKRVAEGPLAQEALRRAEAGVGVAATPATTEEAATVEKVLQQPELREXXXXXXXXXXXQECGDPRALARYMQHPDFGPKLQLMANAGLI 1570
            EEV  +R DE  S+M++M                    R   ++FGGGLKKGF  Q   P                            ++V    +P I    A   L               +PEV  AM      +           W+TP   +++A+ P+L   + +PRFT A+Q MS++P  A+  + S P     F + +  + +HF  +G+  ++K+             P  ++ ++RA     + + P T +E   V++VL  PEL+EXXXXXXXXXXX+ C  P  L+ +M+ P +GPK+Q +  AGL+
Sbjct:   14 EEVDNQRNDE-TSVMDEMLAVATRAKAIKDAAKRADE-RKRNQTFGGGLKKGFFRQAKPPKKE------------------------VATVAPPDIPTIRRNPAKESLH--------------IPEVHAAMNQMQNLKP--------DDWMTPAFFEKLAQNPKLCQAMQNPRFTAAIQEMSSNPTSAMLKYQSDPHFGAIFKDFLEFMGQHFEELGKIEEEKSK------------PPTKQDIQRA----ALTSMPTTPDEEVVVQRVLADPELQEXXXXXXXXXXXRACQQPGVLSTFMKDPVYGPKIQKLVRAGLV 268          
BLAST of mRNA_S-firma_F_contig1006.125.1 vs. uniprot
Match: A0A835Z085_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z085_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 6.690e-16
Identity = 67/209 (32.06%), Postives = 89/209 (42.58%), Query Frame = -1
Query:  614 LVLPEVQEAMKPSAADRLGGTSGAGGQGWLTPELLKEIAEKPRLAAMLTDPRFTKAMQLMSTSPQDALAMFSSSPEARESFTELMSLLSKHFTTMGEAADKKAAAEEADRKRVAEGPLAQEALRRAEAGVGVAATPATTEEA-----------ATVEKVLQQPELREXXXXXXXXXXXQECGDPRALARYMQHPDFGPKLQLMANAGLI 1207
            +VLPEVQ+AM       L  T       WLTP LL +IA +P LAA L  PRFT+A++LM   P+ A+A+F    +AR  FTEL+ LL  HF  +G    + A                                                  A V ++L    LRE           QEC  P  L  Y  HP++GPK++ +A AGL+
Sbjct:    1 VVLPEVQDAMAEQGRALLSSTDA-----WLTPALLSKIAARPALAAALQSPRFTRALELMRDDPRAAMALFGGDADARALFTELLGLLGTHFEELGAQTSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADADVARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQAGLV 204          
BLAST of mRNA_S-firma_F_contig1006.125.1 vs. uniprot
Match: A0A067CSB9_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CSB9_SAPPC)

HSP 1 Score: 87.8 bits (216), Expect = 1.050e-15
Identity = 71/198 (35.86%), Postives = 103/198 (52.02%), Query Frame = -1
Query:  614 LVLPEVQEAMKPSAADRLGGTSGAGGQGWLTPELLKEIAEKPRLAAMLTDPRFTKAMQLMSTSPQDALAMFSSSPEARESFTELMSLLSKHFTTMGEAADKKAAAEEADRKRVAEGPLAQEALRRAEAGVGVAATPATTEEAATVEKVLQQPELREXXXXXXXXXXXQECGDPRALARYMQHPDFGPKLQLMANAGLI 1207
            L LPEVQ AM+           G     W+TP+ + ++A+ P+L   L +PRFT A+Q +ST+P+ A+A +    +      + M  +  HF  +G+ AD  AA                    +A+    + A   T +E A VE++L  PEL+ XXXXXXXXXXXQ C  P  L RY+Q P  GPK++ +  AGL+
Sbjct:   90 LELPEVQAAMQ-----------GLTTNDWMTPDFMDKLAKNPKLCIALQNPRFTAAIQELSTNPEKAMAKYQHDADVSAMLRDFMQFMGAHFEALGKVADADAA--------------------KAKQRHALEAAAHTPQEQAQVERILGDPELQXXXXXXXXXXXXQRCTAPGVLLRYLQDPIVGPKIRKLEAAGLV 256          
BLAST of mRNA_S-firma_F_contig1006.125.1 vs. uniprot
Match: A0A6G0XYI5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYI5_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 7.940e-15
Identity = 59/198 (29.80%), Postives = 102/198 (51.52%), Query Frame = -1
Query:  614 LVLPEVQEAMKPSAADRLGGTSGAGGQGWLTPELLKEIAEKPRLAAMLTDPRFTKAMQLMSTSPQDALAMFSSSPEARESFTELMSLLSKHFTTMGEAADKKAAAEEADRKRVAEGPLAQEALRRAEAGVGVAATPATTEEAATVEKVLQQPELREXXXXXXXXXXXQECGDPRALARYMQHPDFGPKLQLMANAGLI 1207
            L LPEVQ AM      +         + W+TP+L +++A+ P+L+  L +PRFT A+Q MST+P  A+  + + P+    F + M+ +  HF  +G+         E +++R +   + ++AL+       ++ +P   EE A V+++L  PEL +             C  P AL  YM    +GPK++ +A+AGL+
Sbjct:   96 LKLPEVQAAMSEMQNLKP--------EDWMTPDLFEKLAKDPKLSQALQNPRFTAAIQEMSTNPTAAMLKYQNDPDVGVMFKDFMNFMGHHFEHLGKI--------EEEKERKSREEIQRDALK------SMSTSP---EEDAQVQRILADPELMDILGDPAMQQVLHACQKPCALRSYMNDAIYGPKIRKLADAGLV 268          
BLAST of mRNA_S-firma_F_contig1006.125.1 vs. uniprot
Match: A0A1V9ZG46_9STRA (Plectin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZG46_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.160e-14
Identity = 88/286 (30.77%), Postives = 129/286 (45.10%), Query Frame = -1
Query:  614 DTKR--SFGGGLKKGFLSQ----RAVPTPSSTARKGKKGEXXXXXXXXXXXXEGASSVVLESMPVITGKAAPSGLEFDVSAEANSSADLVLPEVQEAMKPSAADRLGGTSGAGGQGWLTPELLKEIAEKPRLAAMLTDPRFTKAMQLMSTSPQDALAMFSSSPEARESFTELMSLLSKHFTTMGEAADKKAAAEEADRKRVAEGPLAQEALRRAEAGVGVAATPATTEEAATVEKVLQQPELREXXXXXXXXXXXQECGDPRALARYMQHPDFGPKLQLMANAGLI 1453
            D KR  SFG GLKKGF S     +A  TP + A                           + +P I  K+  S LE              +PEVQ AM+           G   + W+TPE L ++++ P+L   L +PRFT A+Q MS++P+ A+A + + P       + M  +  HF  +G+  + K                 +   R+ +A    A TP   EE A V+++L  PEL  XXXXXXXXXX + C +P  L R++  P  G K++ +  AGL+
Sbjct:   42 DQKRAVSFGQGLKKGFFSAAPRTKATKTPKAKA---------------------------DDIPTIRAKSTRSSLE--------------IPEVQSAMQ-----------GLQSKDWMTPEFLDKLSKDPKLCTALQNPRFTAAIQEMSSNPEKAVAKYQNDPGVAAMLKDFMQFMGAHFEQLGKDMEAK-----------------ELQARQRQALESAAQTP---EEQAQVQRILSDPELXXXXXXXXXXXXLRACQEPGVLLRHLADPVVGAKIRKLQAAGLV 255          
BLAST of mRNA_S-firma_F_contig1006.125.1 vs. uniprot
Match: W4GNU8_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNU8_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 3.940e-14
Identity = 85/281 (30.25%), Postives = 132/281 (46.98%), Query Frame = -1
Query:  614 RDTKRSFGGGLKKGFLSQRAVPTPSSTARKGKKGEXXXXXXXXXXXXEGASSVVLESMPVITGKAAPSGLEFDVSAEANSSADLVLPEVQEAMKPSAADRLGGTSGAGGQGWLTPELLKEIAEKPRLAAMLTDPRFTKAMQLMSTSPQDALAMFSSSPEARESFTELMSLLSKHFTTMGEAADKKAAAEEADRKRVAEGPLAQEALRRAEAGVGVAATPATTEEAATVEKVLQQPELREXXXXXXXXXXXQECGDPRALARYMQHPDFGPKLQLMANAGLI 1456
            R   ++FGGGLKKGF S    P P+      KK                +++V + S P I        L  + + E++    L LPEV +AM      +         + W+TP   +++   P+L   + +PRFT A+Q MST+P  A+  + + P+    F + +  +  HF  +G+  +K A             P   +  R+A     + +   + EE A V+++L  PEL  XXXXXXXXX  + C  P  L++YM    FGPK+Q +A AGL+
Sbjct:   51 RKRSQTFGGGLKKGFFSN---PKPAK-----KKSV--------------STAVAISSSPDIP------TLRRNPAKESS----LHLPEVHDAMNQMQNLKP--------EDWMTPAFFEKLGRNPKLCQAMKNPRFTAAIQEMSTNPTAAILKYQNDPDFGVMFKDFLQFMGHHFEELGKIEEKTAI------------PTRDDIQRQA-----LTSMSRSPEEDAVVQRILADPELXXXXXXXXXXXVLRACQVPGVLSKYMNDKVFGPKIQKLARAGLV 274          
BLAST of mRNA_S-firma_F_contig1006.125.1 vs. uniprot
Match: A0A7S2EKF9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EKF9_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 6.770e-14
Identity = 64/237 (27.00%), Postives = 109/237 (45.99%), Query Frame = -1
Query:  605 LVLPEVQEAMKPSAADRLGGTSGAGGQGWLTPELLKEIAEKPRLAAMLTDPRFTKAMQLMSTSPQDALAMFSSSPEARESFTELMSLLSKHFTTMGEAADKKAAAEE-----------------ADRKRVAEGPLAQEALRRAEAGVGVAATPATT-------------------EEAATVEKVLQQPELREXXXXXXXXXXXQECGDPRALARYMQHPDFGPKLQLMANAGLISFS 1207
            L+  E+Q+AMK + +  +   SG+    W TP+L+++I++ PRL A L++P+F  A++ +  +P+ A+  F + PE  +   E   +L +HFT +GE  +K                       + R +   GP+A++ L++        AT  TT                   ++   V+ +L   EL +           QEC  P  +  YMQHP+ GPKL+ +  AGL+  S
Sbjct:   90 LIFEEIQDAMKNTPSFDINNASGS----WATPDLMEKISKNPRLLAGLSNPKFAAALEALQKNPRMAMKKFQNHPEIMDYLHEFCGVLGEHFTKLGEEQEKXXXXXXXXXXXXXXXXXXXXXSISSRSKKNIGPIAEKVLKKH-------ATNQTTXXXXXXXXXXXXXXXXTARKDKEKVDSILANRELVDLLMDAEFQNIMQECSIPGRMQMYMQHPEHGPKLRKLLQAGLLQVS 315          
BLAST of mRNA_S-firma_F_contig1006.125.1 vs. uniprot
Match: T0Q0K0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q0K0_SAPDV)

HSP 1 Score: 82.0 bits (201), Expect = 9.640e-14
Identity = 67/198 (33.84%), Postives = 99/198 (50.00%), Query Frame = -1
Query:  614 LVLPEVQEAMKPSAADRLGGTSGAGGQGWLTPELLKEIAEKPRLAAMLTDPRFTKAMQLMSTSPQDALAMFSSSPEARESFTELMSLLSKHFTTMGEAADKKAAAEEADRKRVAEGPLAQEALRRAEAGVGVAATPATTEEAATVEKVLQQPELREXXXXXXXXXXXQECGDPRALARYMQHPDFGPKLQLMANAGLI 1207
            L  PEVQ AM+  A +            W+TP+ + ++A+ P+L   L +PRFT A+Q +ST+P+ A+A +    +      + M  +  HF  +G+AAD  AA                    +A     + A   T +E A V+++L  P    XXXXXXXXXXXQ C  P  L RY+  P  GPK++ +  AGL+
Sbjct:   89 LEFPEVQAAMQGLATND-----------WMTPDFMDKLAKNPKLCVALQNPRFTTAIQELSTNPEKAMAKYQHDADVSTMLRDFMQFMGAHFEALGKAADADAA--------------------KASQRHALEAAAQTPQEQAQVQRILSDPXXXXXXXXXXXXXXXQRCTAPGVLLRYLHDPIVGPKIRKLQAAGLV 255          
BLAST of mRNA_S-firma_F_contig1006.125.1 vs. uniprot
Match: F0Y4B4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4B4_AURAN)

HSP 1 Score: 78.6 bits (192), Expect = 2.610e-11
Identity = 59/174 (33.91%), Postives = 84/174 (48.28%), Query Frame = -1
Query:  614 GQGWLTPELLKEIAEKPRLAAMLTDPRFTKAMQLMSTSPQDALAMFSSSPEARESFTELMSLLSKHFTTMGEAADKKAAAEEADRKRVAEGPLAQEALRRAEAGVGVAATPATT-EEAATVEKVLQQPELREXXXXXXXXXXXQECGDPRALARYMQHPDFGPKLQLMANAGLI 1132
            G  W+TPEL+K +AE+P LA  + DPR   A++ +   P+     F   PE ++  T+   ++  HF  +G A         AD K    GPLA + +  A  G G A  PA T EE   V+ VL    LR+           Q C DPR   R M +PD    ++ +A+AGL+
Sbjct:  174 GGDWVTPELVKAMAERPALARGMGDPRCQAALEALRKDPKAGAKQFDDDPELKQFLTDFCEVMGGHFEKLGAAXXXXXXT--ADEKEQL-GPLAAKVVEDAAKGQGPA--PAKTPEEIKQVDDVLNNAALRDLLMDPKTQLLMQRCADPREFQRAMMNPDERAIIRKLADAGLV 342          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1006.125.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LC77_ECTSI2.870e-11463.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A024UTJ1_9STRA2.870e-1628.21Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A835Z085_9STRA6.690e-1632.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A067CSB9_SAPPC1.050e-1535.86Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A6G0XYI5_9STRA7.940e-1529.80Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9ZG46_9STRA1.160e-1430.77Plectin-like protein n=1 Tax=Achlya hypogyna TaxID... [more]
W4GNU8_9STRA3.940e-1430.25Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A7S2EKF9_9STRA6.770e-1427.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
T0Q0K0_SAPDV9.640e-1433.84Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
F0Y4B4_AURAN2.610e-1133.91Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1006contigS-firma_F_contig1006:12029..13769 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size1741
Cds size987
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1006.125.1prot_S-firma_F_contig1006.125.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1006 12604..13590 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815530.1375334-UTR-S-firma_F_contig1006:12028..126031622815530.1375334-UTR-S-firma_F_contig1006:12028..12603Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1006 12029..12603 +
1696949392.4886355-UTR-S-firma_F_contig1006:12028..126031696949392.4886355-UTR-S-firma_F_contig1006:12028..12603Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1006 12029..12603 +
1622815530.1635826-UTR-S-firma_F_contig1006:13590..137691622815530.1635826-UTR-S-firma_F_contig1006:13590..13769Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1006 13591..13769 +
1696949392.5255854-UTR-S-firma_F_contig1006:13590..137691696949392.5255854-UTR-S-firma_F_contig1006:13590..13769Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1006 13591..13769 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815530.1524055-CDS-S-firma_F_contig1006:12603..135901622815530.1524055-CDS-S-firma_F_contig1006:12603..13590Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 12604..13590 +
1696949392.5131776-CDS-S-firma_F_contig1006:12603..135901696949392.5131776-CDS-S-firma_F_contig1006:12603..13590Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 12604..13590 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1006.125.1

>prot_S-firma_F_contig1006.125.1 ID=prot_S-firma_F_contig1006.125.1|Name=mRNA_S-firma_F_contig1006.125.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=329bp
MCAYKISHHALNEIKPALAISCNLGPKSGCCMYRANARGSPHSCSTLCIP
GSIRSSLSSGCWRTFSTVAASSVVAGVAATPTPASARRSASCASGPSATR
FRSASSAAAFLSAASPIVVKCFDSRDISSVKLSRASGLEENMARASCGEV
DMSCMALVKRGSVSIAASRGFSAISLSSSGVNQPCPPAPLVPPRRSAAEG
FMASWTSGRTRSALLLASADTSNSSPDGAALPVMTGMLSSTTDDAPSLVV
ELFSSLLLLSPFFPFRAVEEGVGTARCDRNPFFNPPPKLRLVSLNCSCRC
SCAVSSLAAIASAIICSIKLGPSSFLSS*
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mRNA from alignment at S-firma_F_contig1006:12029..13769+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1006.125.1 ID=mRNA_S-firma_F_contig1006.125.1|Name=mRNA_S-firma_F_contig1006.125.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1741bp|location=Sequence derived from alignment at S-firma_F_contig1006:12029..13769+ (Sphaerotrichia firma ET2_F female)
CGGGTCGTTACAGTAGTCGCTGCAGTCTGAGCGAGGCGGAAAGCGGCGAG CAAAACCACCACCTCTGCAATGCCAAAGCCTCAGCACGTGTTCTCTCTGT CACCAAGCACGCAATTGAACACGAAACCGACGCCGGTATGGTCCGCGAAA CCCCACCGCCAAATGCACGCTCTGCTTTGCATACATGAACCCCCCGTCCA ACAGAGGATACGTCGATGAAAACAGGAAAGCGGTTCACCTGCCGCGTCAA TTCGTCGTACAAGTACATACACGTGCAACGAAGCCAAAGAGTCGACTGCA TGCTCTCTGAAGAAAAACTGCGCAAATATGAGATGCAGCCACAGGGAGCA GGAAATCGTTTCCGCGTAAGGAAGAGACAATACACACACAGAAAATGCAC GACACAACGAGCGCAACGTGCCCGAACGCCTAGGAGGAGAGAAGACTCCG GAGTATCCGGACAACGATCTTGCGAGAACACCACCTCTCTTGTGGAACAC GGTGATCATTCCACCGGTTCTTCCGAGTAAAATTGACCACATGCACATAA ATATATACGTAACACATACTTCGAAATGTGTGCATACAAAATATCCCATC ACGCGCTGAACGAAATCAAACCAGCATTGGCCATAAGCTGCAACTTGGGC CCAAAGTCCGGGTGCTGCATGTACCGCGCCAACGCCCGGGGATCCCCGCA CTCCTGCAGCACCCTCTGCATCCCGGGGTCCATCAGAAGTTCTCTCAGCT CCGGCTGCTGGAGGACCTTCTCGACGGTGGCTGCCTCTTCCGTAGTCGCT GGTGTTGCCGCCACTCCCACCCCCGCCTCCGCCCGTCGCAGCGCCTCTTG CGCCAGCGGCCCCTCCGCTACCCGCTTCCGATCCGCTTCCTCTGCAGCCG CCTTCTTGTCGGCCGCCTCCCCCATTGTCGTGAAGTGCTTCGACAGCAGG GACATCAGCTCAGTGAAACTCTCTCGTGCCTCGGGACTGGAGGAAAACAT GGCAAGGGCGTCCTGTGGGGAGGTGGACATGAGCTGCATGGCCTTGGTGA AGCGAGGGTCGGTCAGCATCGCCGCCAGCCGCGGCTTCTCGGCGATCTCT TTGAGTAGCTCGGGTGTTAACCAACCCTGCCCGCCGGCGCCACTGGTGCC ACCTAGACGGTCTGCCGCCGAGGGCTTCATGGCTTCTTGGACCTCGGGAA GAACGAGGTCAGCGCTGCTGTTGGCTTCTGCGGACACGTCGAACTCCAGT CCTGACGGCGCCGCTTTGCCGGTGATGACGGGCATGCTTTCTAGCACGAC TGACGACGCGCCTTCGCTGGTTGTTGAGCTTTTTTCTTCCCTCCTTCTTC TCTCTCCCTTTTTCCCCTTCCGCGCGGTCGAGGAAGGAGTGGGAACCGCT CGCTGTGATAGGAATCCCTTTTTCAATCCTCCCCCGAAGCTGCGCTTGGT GTCTCTCAACTGCTCCTGTCGTTGTTCCTGCGCCGTTTCCTCTTTGGCCG CCATCGCCTCTGCCATCATTTGCTCCATCAAACTCGGCCCCTCGTCTTTT CTTTCTTCCTGAACTTCTTCCCATCCCGACCGCCCACTTGACGATGCCCC TCTCGCACCGCCAGCAGCCGGAATTCCGCCCTTGTTCTCTTGTTTCCCTA GGTTCAGCATGGACAGCCGACCGGTCAGCCCAGATCTTCCCTCGGCAGGG ACATCAAGTGTCTCTCGCGCACTACTACCATGGCGAGGTGC
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Coding sequence (CDS) from alignment at S-firma_F_contig1006:12029..13769+

>mRNA_S-firma_F_contig1006.125.1 ID=mRNA_S-firma_F_contig1006.125.1|Name=mRNA_S-firma_F_contig1006.125.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1974bp|location=Sequence derived from alignment at S-firma_F_contig1006:12029..13769+ (Sphaerotrichia firma ET2_F female)
ATGTGTGCATACAAAATATCCCATCACGCGCTGAACGAAATCAAACCAGC
ATTGGCCATAAGCTGCAACTTGGGCCCAAAGTCCGGGTGCTGCATGTACC
GCGCCAACGCCCGGGGATCCCCGCACTCCTGCAGCACCCTCTGCATCCCG
GGGTCCATCAGAAGTTCTCTCAGCTCCGGCTGCTGGAGGACCTTCTCGAC
GGTGGCTGCCTCTTCCGTAGTCGCTGGTGTTGCCGCCACTCCCACCCCCG
CCTCCGCCCGTCGCAGCGCCTCTTGCGCCAGCGGCCCCTCCGCTACCCGC
TTCCGATCCGCTTCCTCTGCAGCCGCCTTCTTGTCGGCCGCCTCCCCCAT
TGTCGTGAAGTGCTTCGACAGCAGGGACATCAGCTCAGTGAAACTCTCTC
GTGCCTCGGGACTGGAGGAAAACATGGCAAGGGCGTCCTGTGGGGAGGTG
GACATGAGCTGCATGGCCTTGGTGAAGCGAGGGTCGGTCAGCATCGCCGC
CAGCCGCGGCTTCTCGGCGATCTCTTTGAGTAGCTCGGGTGTTAACCAAC
CCTGCCCGCCGGCGCCACTGGTGCCACCTAGACGGTCTGCCGCCGAGGGC
TTCATGGCTTCTTGGACCTCGGGAAGAACGAGGTCAGCGCTGCTGTTGGC
TTCTGCGGACACGTCGAACTCCAGTCCTGACGGCGCCGCTTTGCCGGTGA
TGACGGGCATGCTTTCTAGCACGACTGACGACGCGCCTTCGCTGGTTGTT
GAGCTTTTTTCTTCCCTCCTTCTTCTCTCTCCCTTTTTCCCCTTCCGCGC
GGTCGAGGAAGGAGTGGGAACCGCTCGCTGTGATAGGAATCCCTTTTTCA
ATCCTCCCCCGAAGCTGCGCTTGGTGTCTCTCAACTGCTCCTGTCGTTGT
TCCTGCGCCGTTTCCTCTTTGGCCGCCATCGCCTCTGCCATCATTTGCTC
CATCAAACTCGGCCCCTCGTCTTTTCTTTCTTCCTGAATGTGTGCATACA
AAATATCCCATCACGCGCTGAACGAAATCAAACCAGCATTGGCCATAAGC
TGCAACTTGGGCCCAAAGTCCGGGTGCTGCATGTACCGCGCCAACGCCCG
GGGATCCCCGCACTCCTGCAGCACCCTCTGCATCCCGGGGTCCATCAGAA
GTTCTCTCAGCTCCGGCTGCTGGAGGACCTTCTCGACGGTGGCTGCCTCT
TCCGTAGTCGCTGGTGTTGCCGCCACTCCCACCCCCGCCTCCGCCCGTCG
CAGCGCCTCTTGCGCCAGCGGCCCCTCCGCTACCCGCTTCCGATCCGCTT
CCTCTGCAGCCGCCTTCTTGTCGGCCGCCTCCCCCATTGTCGTGAAGTGC
TTCGACAGCAGGGACATCAGCTCAGTGAAACTCTCTCGTGCCTCGGGACT
GGAGGAAAACATGGCAAGGGCGTCCTGTGGGGAGGTGGACATGAGCTGCA
TGGCCTTGGTGAAGCGAGGGTCGGTCAGCATCGCCGCCAGCCGCGGCTTC
TCGGCGATCTCTTTGAGTAGCTCGGGTGTTAACCAACCCTGCCCGCCGGC
GCCACTGGTGCCACCTAGACGGTCTGCCGCCGAGGGCTTCATGGCTTCTT
GGACCTCGGGAAGAACGAGGTCAGCGCTGCTGTTGGCTTCTGCGGACACG
TCGAACTCCAGTCCTGACGGCGCCGCTTTGCCGGTGATGACGGGCATGCT
TTCTAGCACGACTGACGACGCGCCTTCGCTGGTTGTTGAGCTTTTTTCTT
CCCTCCTTCTTCTCTCTCCCTTTTTCCCCTTCCGCGCGGTCGAGGAAGGA
GTGGGAACCGCTCGCTGTGATAGGAATCCCTTTTTCAATCCTCCCCCGAA
GCTGCGCTTGGTGTCTCTCAACTGCTCCTGTCGTTGTTCCTGCGCCGTTT
CCTCTTTGGCCGCCATCGCCTCTGCCATCATTTGCTCCATCAAACTCGGC
CCCTCGTCTTTTCTTTCTTCCTGA
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