mRNA_S-firma_F_contig10904.1206.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10904.1206.1 vs. uniprot
Match: A0A485KTR9_9STRA (Aste57867_11298 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTR9_9STRA) HSP 1 Score: 119 bits (297), Expect = 7.570e-28 Identity = 68/177 (38.42%), Postives = 104/177 (58.76%), Query Frame = 1
Query: 4 FGGKLSAAQTVPVQGY-GPVPTMLLVLHSWLVESGGLNKEGVFRLAPSRSKNDAIKAGLANGEVTQVEDASVASNLIKVWLRELEPNVLNSCTEAEIGIAAEAGVVGPLIMGLEPVARAT---ILWLLDVGLFVAS-QPSTRMSSHGLAVVFAPNMYSITAVNPMAAMSLSQMVSKF 519
FG + A V GY G VP +L ++ +LV GGL+ EG+FRLAP ++ + +K + NG D + SNLIKVW REL ++ N+ E + A E ++ L+ V ++T ILWLLD+ V + T+MSS +A+V +PN++SI + NPM A+++SQ V++F
Sbjct: 402 FGLPMDAVPKRKVDGYDGKVPAVLQMMKEYLVHHGGLDTEGIFRLAPDKALCNQVKDAINNGTFVGCSDVHIVSNLIKVWFRELPISLFNAIPEKSMYKACELKDAHDVMAVLKDVPQSTHTVILWLLDLMADVVKHEAKTKMSSKNMAIVLSPNLFSIASDNPMVALTMSQKVAEF 578
BLAST of mRNA_S-firma_F_contig10904.1206.1 vs. uniprot
Match: A0A067CWN0_SAPPC (Rho-GAP domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CWN0_SAPPC) HSP 1 Score: 117 bits (294), Expect = 1.230e-27 Identity = 65/178 (36.52%), Postives = 103/178 (57.87%), Query Frame = 1
Query: 4 FGGKLSAAQTVPVQGY-GPVPTMLLVLHSWLVESGGLNKEGVFRLAPSRSKNDAIKAGLANGEVTQVEDASVASNLIKVWLRELEPNVLNSCTEAEI----GIAAEAGVVGPLIMGLEPVARATILWLLDV-GLFVASQPSTRMSSHGLAVVFAPNMYSITAVNPMAAMSLSQMVSKF 519
FG + A V GY +P +L ++ +LV++GGL EG+FRLAP + A+K + NG D + +NLIKVW REL ++LN E I G+ + +V ++ + R+ ILWLLD+ V + T+MS+ +A+V +PN++SI + NPM A+++SQ V++F
Sbjct: 314 FGLPIDAVPKRKVDGYDAKIPAVLQMMREYLVQNGGLETEGIFRLAPDKEACSAVKEAMNNGVFAGCNDVHIIANLIKVWFRELPESLLNVIPEKRIYQVCGVT-DPSLVLDVLRDVPTSQRSVILWLLDLMAAVVLREKQTKMSAKNMAIVLSPNLFSIASDNPMVALTMSQKVAEF 490
BLAST of mRNA_S-firma_F_contig10904.1206.1 vs. uniprot
Match: A0A813BMN2_9DINO (GacA protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BMN2_9DINO) HSP 1 Score: 116 bits (290), Expect = 2.170e-27 Identity = 74/190 (38.95%), Postives = 104/190 (54.74%), Query Frame = 1
Query: 4 FGGKLSAAQTVPVQGYGPVPTMLLVLHSWLVESGGLNKEGVFRLAPSRSKNDAIKAGLANGEVTQV---EDASVASNLIKVWLRELEPNVLNSCT-EAEIGIAAE--AGVVGPLIM---GLEPVARATILWLLDVGLFVA-SQPSTRMSSHGLAVVFAPNMYSITAVNPMAAMSLSQMVSKFLEHAFTWR 543
F L+ + GYG +P +LL L + + GGL EG+FR++ SK A +A + G+V Q D +VA+NLIK++ REL+P +L +C EA++ A++ A V L+ + P R LWL+DV L VA +QP RM LAVV APN++ + N M M LSQ FL A WR
Sbjct: 231 FAVPLADLPCTHLAGYGSIPNVLLFLAGQVRQHGGLTSEGIFRISGEGSKVSAARAAIDTGDVAQALAQMDCNVAANLIKLFFRELQPELLLNCLPEAKLVPASKGSADAVQGLLEDADAIPPTQRGLFLWLVDVLLAVAENQPLNRMGEQALAVVLAPNLHFVQTANAMRIMELSQAAVAFLRKALAWR 420
BLAST of mRNA_S-firma_F_contig10904.1206.1 vs. uniprot
Match: A0A1V9ZRL1_9STRA (Rho-GAP domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZRL1_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.750e-25 Identity = 66/177 (37.29%), Postives = 98/177 (55.37%), Query Frame = 1
Query: 4 FGGKLSAAQTVPVQGY-GPVPTMLLVLHSWLVESGGLNKEGVFRLAPSRSKNDAIKAGLANGEVTQVEDASVASNLIKVWLRELEPNVLNSCTEAEIGIAAEAGVVGPLIMGLEPVARA---TILWLLDV-GLFVASQPSTRMSSHGLAVVFAPNMYSITAVNPMAAMSLSQMVSKF 519
FG + A V GY +P +L ++ +LV+ GGL EG+FRLAP R A K + NG D + +NLIKVW REL ++ N E I A G ++ L V + ILWLLD+ V + +T+MS+ +A+V +PN++SI + NPM A+++SQ V++F
Sbjct: 307 FGLPIDAVPKRKVDGYEAKIPAVLQMMKEYLVQHGGLETEGIFRLAPDRDACAAAKEAMNNGVFAGCNDVHIIANLIKVWFRELPDSLFNVIPEKLIYKACGLGDPVQVLRVLTDVPASQKDVILWLLDLMAAVVLHEKATKMSAKNMAIVLSPNLFSIESDNPMVALTMSQKVAEF 483
BLAST of mRNA_S-firma_F_contig10904.1206.1 vs. uniprot
Match: A0A1W0A6K8_9STRA (Rho-GAP domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6K8_9STRA) HSP 1 Score: 110 bits (275), Expect = 4.760e-25 Identity = 62/177 (35.03%), Postives = 102/177 (57.63%), Query Frame = 1
Query: 4 FGGKLSAAQTVPVQGY-GPVPTMLLVLHSWLVESGGLNKEGVFRLAPSRSKNDAIKAGLANGEVTQVEDASVASNLIKVWLRELEPNVLNSCTEAEIGIAAEAGVVGPLIMGLEPVARA---TILWLLDVG-LFVASQPSTRMSSHGLAVVFAPNMYSITAVNPMAAMSLSQMVSKF 519
FG + A V GY G +P +L ++ +L+ GGL+ EG+FRLAP + + +K + NG T D + +NLIKVW REL ++ N E I ++ L+ ++ + ILWLLD+ L V ++ T+MS+ +A+V +PN++SI + NPM A+++S+ V++F
Sbjct: 299 FGLPIDAVPKRKVVGYEGKIPAVLQMMKDYLILHGGLDTEGIFRLAPDKEACNRVKDAMNNGNFTGCNDVHIVANLIKVWFRELPESLFNVFPEKLIYKVCSMNDPIQVLSILDDISSSQKNVILWLLDLMCLVVKNEKQTKMSAKNMAIVLSPNLFSIESDNPMVALTMSRQVAEF 475
BLAST of mRNA_S-firma_F_contig10904.1206.1 vs. uniprot
Match: A0A024UT44_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UT44_9STRA) HSP 1 Score: 108 bits (269), Expect = 4.700e-24 Identity = 61/177 (34.46%), Postives = 100/177 (56.50%), Query Frame = 1
Query: 4 FGGKLSAAQTVPVQGY-GPVPTMLLVLHSWLVESGGLNKEGVFRLAPSRSKNDAIKAGLANGEVTQVEDASVASNLIKVWLRELEPNVLNSCTEAEIGIAAEAGVVGPLIMGLEPV---ARATILWLLDVGL-FVASQPSTRMSSHGLAVVFAPNMYSITAVNPMAAMSLSQMVSKF 519
FG + A V+GY G +P +L ++ +LV GGL EG+FRLAP + + +K + +G D + +NLIKVW R+L ++ N E + A ++ L V ++ +LWLLD+ V ++ T+MSS +A+V +PN++SI + NPM A+++SQ V++F
Sbjct: 377 FGLPMEALPKRVVEGYDGKIPAVLQMMKEYLVLHGGLETEGIFRLAPDKEQCSRVKGAINSGSFAGCNDVHIVANLIKVWFRDLPTSLFNVIPEKVMYKACTLKTPESVMAMLNDVPETSKTVMLWLLDLMAGVVKNEKVTKMSSKNMAIVLSPNLFSIESDNPMVALTMSQKVAEF 553
BLAST of mRNA_S-firma_F_contig10904.1206.1 vs. uniprot
Match: UPI0006447C1D (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006447C1D) HSP 1 Score: 105 bits (262), Expect = 8.280e-24 Identity = 62/182 (34.07%), Postives = 98/182 (53.85%), Query Frame = 1
Query: 1 LFGGKLSAAQTVPVQGYGPVPTMLLVLHSWLVESGGLNKEGVFRLAPSRSKNDAIKAGLANGEVTQVEDASVASNLIKVWLRELEPNVLNSCTEAEIGIAAEAGVVGPLIMGLEPVARATILWLLDVGLFVASQPST-RMSSHGLAVVFAPNMYSITAVNPMAAMSLSQMVSKFLEHAFTWR 543
+FG S + V +GY VP +L+ + L+E GGL +EG+FRLA +++ IK + E T D + ++LIK+W REL +LNS I + + L + + + WLL + L VAS S +M+ LA+V APN+Y +++ NPM + LSQ +F+ + T+R
Sbjct: 159 VFGVDPSTLEQVEDEGYR-VPAILVQMKRSLIEFGGLEQEGIFRLAGEQTEIKRIKGSMNKNEFTSSNDINTVASLIKIWYRELPTPILNSIPTENIFHCNDVETCVEAVNRLPSIQKNLLDWLLALLLQVASHASVNKMTLQNLAIVVAPNLYDVSSSNPMEGLVLSQKCVQFIHNVLTYR 339
BLAST of mRNA_S-firma_F_contig10904.1206.1 vs. uniprot
Match: A0A6G0XQ20_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQ20_9STRA) HSP 1 Score: 107 bits (267), Expect = 8.750e-24 Identity = 60/178 (33.71%), Postives = 96/178 (53.93%), Query Frame = 1
Query: 4 FGGKLSAAQTVPVQGYGP-VPTMLLVLHSWLVESGGLNKEGVFRLAPSRSKNDAIKAGLANGEVTQVEDASVASNLIKVWLRELEPNVLNSCTEAEIGIAAEAG----VVGPLIMGLEPVARATILWLLDV-GLFVASQPSTRMSSHGLAVVFAPNMYSITAVNPMAAMSLSQMVSKF 519
FG + A V GY +P +L ++ +L GGL EGVFRLAP + + +K + NG D + +NLIKVW R+L ++ N+ + I E + L G+ + +LWLLD+ V + T+MS+ +A+V +PN++SI + NPM A+++SQ V++F
Sbjct: 372 FGLPIDAVPKRKVDGYETKIPAVLQMMKEYLALHGGLETEGVFRLAPDKEECSLVKEAINNGSFAGCNDVHIIANLIKVWFRDLPTSLFNAIPDKSIYKVCELRDLHQALSVLDEGVPESTKGVVLWLLDLMAEVVKHEKRTKMSAKNMAIVLSPNLFSIASDNPMVALTMSQKVAEF 549
BLAST of mRNA_S-firma_F_contig10904.1206.1 vs. uniprot
Match: A0A397ERF4_9STRA (Rho-GAP domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ERF4_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.240e-23 Identity = 59/177 (33.33%), Postives = 97/177 (54.80%), Query Frame = 1
Query: 4 FGGKLSAAQTVPVQGY-GPVPTMLLVLHSWLVESGGLNKEGVFRLAPSRSKNDAIKAGLANGEVTQVEDASVASNLIKVWLRELEPNVLNSCTEAEIGIAAEAGV---VGPLIMGLEPVARATILWLLDV-GLFVASQPSTRMSSHGLAVVFAPNMYSITAVNPMAAMSLSQMVSKF 519
FG + A V GY +P +L ++ +LV GGL EG+FRLAP + + +K + NG D + +NLIKVW R+L ++ N + + V ++ + ++ ILWLLD+ V + +T+MSS +A+V +PN++SI + NPM A+++SQ V++F
Sbjct: 121 FGLPMEAMPKRVVDGYDSKIPAVLQMMKEYLVLHGGLETEGIFRLAPDKEQCSRVKDAINNGSFGGCNDVHIVANLIKVWFRDLPTSLFNVIPDKIMYKTCTLKTPESVMDMLADVPEASKIVILWLLDLMAEVVKHEKATKMSSKNMAIVLSPNLFSIESDNPMVALTMSQKVAEF 297
BLAST of mRNA_S-firma_F_contig10904.1206.1 vs. uniprot
Match: A0A3R6XGJ6_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XGJ6_9STRA) HSP 1 Score: 104 bits (259), Expect = 4.080e-23 Identity = 59/177 (33.33%), Postives = 97/177 (54.80%), Query Frame = 1
Query: 4 FGGKLSAAQTVPVQGY-GPVPTMLLVLHSWLVESGGLNKEGVFRLAPSRSKNDAIKAGLANGEVTQVEDASVASNLIKVWLRELEPNVLNSCTEAEIGIAAEAGV---VGPLIMGLEPVARATILWLLDV-GLFVASQPSTRMSSHGLAVVFAPNMYSITAVNPMAAMSLSQMVSKF 519
FG + A V GY +P +L ++ +LV GGL EG+FRLAP + + +K + NG D + +NLIKVW R+L ++ N + + V ++ + ++ ILWLLD+ V + +T+MSS +A+V +PN++SI + NPM A+++SQ V++F
Sbjct: 210 FGLPMEAMPKRVVDGYDSKIPAVLQMMKEYLVLHGGLETEGIFRLAPDKEQCSRVKDAINNGSFGGCNDVHIVANLIKVWFRDLPTSLFNVIPDKIMYKTCTLKTPESVMDMLADVPEASKIVILWLLDLMAEVVKHEKATKMSSKNMAIVLSPNLFSIESDNPMVALTMSQKVAEF 386 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10904.1206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10904.1206.1 >prot_S-firma_F_contig10904.1206.1 ID=prot_S-firma_F_contig10904.1206.1|Name=mRNA_S-firma_F_contig10904.1206.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=184bp LFGGKLSAAQTVPVQGYGPVPTMLLVLHSWLVESGGLNKEGVFRLAPSRSback to top mRNA from alignment at S-firma_F_contig10904:1371..2039- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10904.1206.1 ID=mRNA_S-firma_F_contig10904.1206.1|Name=mRNA_S-firma_F_contig10904.1206.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=669bp|location=Sequence derived from alignment at S-firma_F_contig10904:1371..2039- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10904:1371..2039- >mRNA_S-firma_F_contig10904.1206.1 ID=mRNA_S-firma_F_contig10904.1206.1|Name=mRNA_S-firma_F_contig10904.1206.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1104bp|location=Sequence derived from alignment at S-firma_F_contig10904:1371..2039- (Sphaerotrichia firma ET2_F female)back to top |