mRNA_S-firma_F_contig1004.106.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-firma_F_contig1004.106.1
Unique Name	mRNA_S-firma_F_contig1004.106.1
Type	mRNA
Organism	Sphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)

Homology

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BLAST of mRNA_S-firma_F_contig1004.106.1 vs. uniprot
Match: D7FVD9_ECTSI (Similar to Serine/threonine-protein kinase Sgk3 (Serum/glucocorticoid-regulated kinase 3) (Serum/glucocorticoid-regulated kinase-like) isoform 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVD9_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 3.750e-117
Identity = 208/292 (71.23%), Postives = 222/292 (76.03%), Query Frame = 1

Query:  178 RSERTTLAAGPPRHRHRGRATPLPPAFPPPARGIATVGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDAPAHPELELSVPSHQEHLTADGQRYTTYEVMVRMGGRQWSVRKRYSQFDQFRMSLRRQHKEVGSFRFPNKSKFNTFSEHTKERRRTGFDEFLRLVANLHPRPEEVDVFLAMDEHGAGVHGRSGSRPLAWTSAKIPPLHAPDGPALGRVWPENGRAGGGRRLVNAS-VVRTPKGGAVHRIPRFPPLADQGRSEKAAEAVXXXXXXXXXXXSRSVLSGVVRQAD 1050
            R+   +  AGPP +R R  ATPLP AFPP   G   +  D                           GLD   H ELELSVPSHQEHLTADGQRYTTYEVMVRMGGRQWSVRKRYSQFDQFRMSLR+QHKEVGSFRFP+KSKFNTF+EHTKERRRTGFDEFLRLVANLHPRPEEVDVFLAMDEHGAGV GR GSRPLAWTS K  PL+ P GPALGRVW  +GR  GGRRL + S VVR PKGG  HRIPRFPPLADQGR+EKAAEA XXXXXXXXXXX R+ LSGVV+Q +
Sbjct:   47 RTSSVSKTAGPPPYRSRSVATPLPAAFPPXXXGRVAIANDGDGDEEPSNGTSPEIDQSRVSAQ----GLDV-GH-ELELSVPSHQEHLTADGQRYTTYEVMVRMGGRQWSVRKRYSQFDQFRMSLRKQHKEVGSFRFPHKSKFNTFAEHTKERRRTGFDEFLRLVANLHPRPEEVDVFLAMDEHGAGVRGRPGSRPLAWTSTKTSPLNPPPGPALGRVWSGSGRTNGGRRLASGSGVVRNPKGGTAHRIPRFPPLADQGRNEKAAEAXXXXXXXXXXXXXRNGLSGVVQQNE 332

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BLAST of mRNA_S-firma_F_contig1004.106.1 vs. uniprot
Match: A0A7S0XGX7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XGX7_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.500e-16
Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 1

Query:  406 LELSVPSHQEHLTADGQRYTTYEVMVRM--GGRQWSVRKRYSQFDQFRMSLRRQHKEVGSFRFPNKSKFNTFSEHTKERRRTGFDEFLRLVANLHPRPEEVDVFLAMDEH 729
            L +SVPS +E + + GQ  T Y V +       ++S+ KRYS+F Q +  L+ ++ E+ SF+FPNKS FNT +  TKERRR GFD+FL+++    P P E + FL ++EH
Sbjct:    1 LLVSVPSFEEQIDSHGQPVTYYVVHIESTTSNLRYSLMKRYSKFAQLKNLLKEKYPEMESFKFPNKSVFNTQAYFTKERRRQGFDDFLKMLCKTIPMPIEFEEFLELNEH 110

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BLAST of mRNA_S-firma_F_contig1004.106.1 vs. uniprot
Match: A0A836CA34_9STRA (PX domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA34_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 9.880e-13
Identity = 36/67 (53.73%), Postives = 48/67 (71.64%), Query Frame = 1

Query:  514 KRYSQFDQFRMSLRRQHKEVGSFRFPNKSKFNTFSEHTKERRRTGFDEFLRLVANLHPRPEEVDVFL 714
            +RYS F+  R ++R  H+ V  F FP+KSKFNTF++ TKERRRTGF++F+ L+     RP EVD FL
Sbjct:    1 RRYSDFEALRDAVRSVHRCVSDFDFPHKSKFNTFADWTKERRRTGFEDFMMLLLGFTTRPAEVDAFL 67

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BLAST of mRNA_S-firma_F_contig1004.106.1 vs. uniprot
Match: A0A7S2CPX7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CPX7_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.350e-7
Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 1

Query:  385 DAPAHPELELSVPSHQEHLTADGQRYTTYEVMVRMG-GRQWSVRKRYSQFDQFRMSLRRQHKEVGSFRFPNKSKFNTFSEHTKERRRTGFDEFLRLVANLHPRPEEV 702
            + P+H    ++VP   E    DG R+T Y    +   G  W++ KRY+      + L   + ++  +RFP KS FNTF+E T+ERRR+GF++++ L+  ++ R  EV
Sbjct:    6 ELPSHSISSITVPKWIEIEKEDGTRHTIYIFKAQAADGTTWTLEKRYTDVFDMHIRLFDTNPQISGYRFPKKSVFNTFAEFTRERRRSGFEDYMGLLLTMN-RVREV 111

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_F_contig1004.106.1 vs. uniprot

BLAST of mRNA_S-firma_F_contig1004.106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D7FVD9_ECTSI	3.750e-117	71.23	Similar to Serine/threonine-protein kinase Sgk3 (S...	[more]
A0A7S0XGX7_9STRA	1.500e-16	43.64	Hypothetical protein (Fragment) n=2 Tax=Chromulina...	[more]
A0A836CA34_9STRA	9.880e-13	53.73	PX domain-containing protein (Fragment) n=1 Tax=Tr...	[more]
A0A7S2CPX7_9STRA	1.350e-7	34.58	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_F_contig1004	contig	S-firma_F_contig1004:11979..18056 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90	2022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female	2021-02-24

Properties


Property Name	Value
Seed ortholog	112098.XP_008609944.1
PFAMs	PX,Pkinase,Pkinase_C
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K13303
KEGG Pathway	ko04068,ko04151,map04068,map04151
Evalue	8.56e-09
EggNOG OGs	KOG0598@1\|root,KOG0598@2759\|Eukaryota
EC	2.7.11.1
Description	protein serine/threonine kinase activity
COG category	H
BRITE	ko00000,ko00001,ko01000,ko01001
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Phox homologous domain
Ec32 ortholog	Ec-14_000750.1
Exons	11
Model size	1763
Cds size	1320
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815528.3780205-UTR-S-firma_F_contig1004:11978..12334	1622815528.3780205-UTR-S-firma_F_contig1004:11978..12334	Sphaerotrichia firma ET2_F female	UTR	S-firma_F_contig1004 11979..12334 -
1696949390.9069142-UTR-S-firma_F_contig1004:11978..12334	1696949390.9069142-UTR-S-firma_F_contig1004:11978..12334	Sphaerotrichia firma ET2_F female	UTR	S-firma_F_contig1004 11979..12334 -
1622815528.5437653-UTR-S-firma_F_contig1004:17969..18056	1622815528.5437653-UTR-S-firma_F_contig1004:17969..18056	Sphaerotrichia firma ET2_F female	UTR	S-firma_F_contig1004 17970..18056 -
1696949391.1003137-UTR-S-firma_F_contig1004:17969..18056	1696949391.1003137-UTR-S-firma_F_contig1004:17969..18056	Sphaerotrichia firma ET2_F female	UTR	S-firma_F_contig1004 17970..18056 -

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_F_contig1004.106.1	prot_S-firma_F_contig1004.106.1	Sphaerotrichia firma ET2_F female	polypeptide	S-firma_F_contig1004 12335..17969 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-firma_F_contig1004:11979..18056-
coding sequence from alignment at S-firma_F_contig1004:11979..18056-

protein sequence of mRNA_S-firma_F_contig1004.106.1

>prot_S-firma_F_contig1004.106.1 ID=prot_S-firma_F_contig1004.106.1|Name=mRNA_S-firma_F_contig1004.106.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=440bp
MEHEEEAMHSGNSTEEEGSASSTRRRSARPRSERTTLAAGPPRHRHRGRA
TPLPPAFPPPARGIATVGGDGDGASISSTSSRSPELDRSRVAVAAAAGLD
APAHPELELSVPSHQEHLTADGQRYTTYEVMVRMGGRQWSVRKRYSQFDQ
FRMSLRRQHKEVGSFRFPNKSKFNTFSEHTKERRRTGFDEFLRLVANLHP
RPEEVDVFLAMDEHGAGVHGRSGSRPLAWTSAKIPPLHAPDGPALGRVWP
ENGRAGGGRRLVNASVVRTPKGGAVHRIPRFPPLADQGRSEKAAEAVAAA
AAAAATSSSRSVLSGVVRQADLLLRRLLGPDLLSMLCVVAVSAVSIVGVW
KIGGKPGLATLVMAVCVGLFVQNWDRALDLLNQGLELVGVRLDGVQSTSN
GRQRSASYASSRSDRPRAESAAASLGSSRQPPTIREGRQ*

mRNA from alignment at S-firma_F_contig1004:11979..18056-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-firma_F_contig1004.106.1 ID=mRNA_S-firma_F_contig1004.106.1|Name=mRNA_S-firma_F_contig1004.106.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=6078bp|location=Sequence derived from alignment at S-firma_F_contig1004:11979..18056- (Sphaerotrichia firma ET2_F female)
CTTGGCTGCGCTTGCCGTTTCTGGTTTCTGTCCCCGCTGCACAGCGGCTC
AGCTCTGGTGCGTGGTCACCTTCCTCTTGCTTCATCCATGGAACACGAGG
AGGAAGCGATGCATTCAGGAAACAGCACCGAGGAAGAAGGTGTGCGAAGT
GCGAAGCATATGCAATGCGGCCGAACCTCGACGAATTTATTTTTCCGTTG
CTCGTGCCGCAAGCTCTCGTCTCTGAGGTCCTGCCAGCCTGCTGCGTATA
CATAGAAGTATAGAAGCACACATTAGCTCTCTCCCTTATGTTCGTTACGC
TCCCTCATGATGCGATCGCCAGGCAATCGAATAGTGCAACTTCCTCTCGG
AAACACTCGCGATTCCTACCCTAATTTATTGTGACAGGCTCTGCCTCTTC
GACCCGCCGGAGAAGCGCTCGGCCGCGTTCCGAGAGAACAACACTTGCAG
CGGGGCCACCGCGCCACCGGCACCGGGGCCGTGCGACCCCGCTCCCACCG
GCCTTTCCTCCCCCTGCTAGGGGAATAGCCACTGTTGGGGGCGATGGTGA
CGGAGCGTCGATTTCGAGTACATCAAGTCGGTCCCCGGAGCTCGACCGTT
CGAGGGTTGCTGTTGCCGCCGCCGCGGGACTTGATGCACCGGCCCATCCA
GAGCTCGAGCTGTCGGTTCCATCCCATCAGGAGCACTTGACCGCTGATGG
ACAGAGGTGACGCATCGTTTTTTTAATGTTTCCGCGATGTACACATGCAG
ACAGCAGTATTGTCATGGGGTATGGTGTGTACGAAGGTGTTCTGTGCGCC
GTTCGAAGAAGCTGGTAAGGTTGTTTCTCTTGGTCCCATGAGACGAAGAC
GAGACGAGACACCGCGTGTAAGGTGCCTGTTTTGCCTGTCTCTAGCCGCG
TAGAGAGGTCGCCCCAGTGGTCTGAAGGTGTCCTCGGAAATCGTTGGATG
TTAATTTATTGTCGAAACAAGCAACATCTGTTGTACAGAAGAGTGATACG
TGGAGTAGGAAGGCGATGTTTGGTGGGTTGTGCCGTCCGTGCATATCGTC
GACGAAGCAAGACGAAGACTTCTCGTCCAATTCTCTTGGATTTGTGTTGT
AGTGCTGTACATCGCAGAGGGAAGTTGAGAGTGCGATGCCTCCTTCGTGA
CCCTGGCTCCACCTTACGCCGCTTGCCAAACGAGGAAAAATAGGCTTCCA
TACAAGTAGTACTCGTAGCGCAGGACAGATCGGCGCGCCGCAACTCGTAC
GATCCACAAACTCCACAGCAGTGGGAGCAAGCGACTGAGTTACAATAGAA
CGCGGCGCTCGGGAGTGTTCGTTGTCTCTGATTGTGGAACATCACTCCGT
TGGTGCTTCAAACGGATTGAAGGCTTGATAACTTTCAAACATCATGTTGA
GCCAGCAAACTAGCACCCAGTCGAAAACATCACATATTTTTCTCTTGTTG
GAAGCAAATCGCCGACCTAACTACATGGTACACCGTATGGTATTTAGGAA
CATGTCCTCCTGATCGCATGGTGTCCGGTGCTGCGTGAGTGTTTTGTGTT
GATGCGAAAGTCTCCCCTTTTGACGCAAATTGAAGTTCGTTTTGATGCTG
ACGCTTTCTTTTGTCAGGTATACAACGTACGAGGTGATGGTGCGCATGGG
AGGACGGCAGTGGAGCGTGCGAAAGCGTTACTCACAGTTCGACCAATTTC
GCATGGTACGTGCTACGGGTTGCCTACAAAGGAACGCCTCTCGCTACGTA
ACCATTTTTCAGTAAGCTCTCCACTCGTAAAAGGTACAGTTCGGTTCTAG
AACTAATTGCATATTTCAGCTAACCTAGACACCGAGCGTTACCTTGATTT
GGTAGCTATTATCTCTGGACACAAGATGGCATTGTTGAGGTGCAGCCCGG
CCATGCGCACAAATGTATTCGTAACTTTTTACCAAGTCGCAAATTCACAT
TCACTATTTGTGGTGCTTCTGCCGTGGATCAAGCGCTGCGTGCGCGTGTT
TTGAAAGGAGGAGTATGGTGGCGCAACTCTTACTAGACACACAGAGCGTT
TCGTTACCATTCCATTCCCACACGATCGCTGGCTTTTGTTGCGCCTACTA
CGTGCTCGTTTTTTGTGCTCTTCAGTCGCTTCGGAGACAGCATAAAGAGG
TGGGCTCTTTCCGATTCCCGAATAAGTCCAAGTTCAACACGTTCTCCGAA
CACACCAAGGTGAGAGCATCTCAAGAAACGGTGAAATGCGCACCTCAGAT
GCAGGGGGGGGATAAGCACGGCTAGGAAACACGGCAACAGTTTAGGTTTT
CCCCCGCACGCTCAACCCCTCAGGCTCTCAGGCTGGCCGTTTTGTTTGCC
GCTTACCACCCCTTTTTTTCACGGGTGATCCACGCACATTTTCGGTGTTG
GTTGCACTGCGCCCATCCTTCCCCCAGTAATCATGCGACGTATATACTGC
TGCGCGTGTCGACGTTCGTGCTGCCTGGTGTCTTGCGTCGTTTCAGGAGC
GGCGAAGGACAGGGTTCGATGAGTTTCTTCGCCTCGTGGTGAGCAGGTTG
CAATTGTTCTTCTGTTCCACGCGTGGGTGAACCTAGAGCACCCTAGGAAA
CAACAACGGAAGTCAAAAATAAAAAAAGCAACCCGCGTGTCACACCGCGC
CACAAGCTGCTCATGGTGGCAAGGGTTGGGATAATGCCAGTACGAATTGA
GACAAGAGTTATAACAAATGCACATTCTTCAGACCATCCCGTAAACGCAC
GGTCACTTTGATACCAAGCGGTGCTTTAAATAACAACCCCCCCCCCCCCT
CCGGCGACCGCATGTGACGGGTTGGTTGAGTAGGCTAACCTGCACCCGCG
GCCGGAAGAAGTGGACGTTTTCTTGGCGATGGACGAGCATGGGGCGGGTG
TGCACGGACGGTCCGGTAGTCGACCACTGGCGTGGACTAGCGCGAAGATC
CCCCCACTACATGCCCCAGACGGCCCTGGTGAGAAATTGGGAAGTTTGCG
GCCACGTGCACGCTTAGCCCTCGCCGGTAGGAAACAAAGTTAACCCACGA
TTCCGTGGGGGGGTGCTCTCGACCACCCCAGCGTGTTTGTTTTTACGGCA
GGCGTTTTAAGTGCGTGTTGGCCGCCTCTGGTAGCAAGTACAGGAGGGGC
GTGCCATCCCAAGAGAGTGTCTCTGCGAAAACTCGTGTGTTTCTTCGGCC
GATGCTTGTCGCTCAAGTTGTGTTGAAGCTTCTCTTCCCTTTCCTTGCCT
TCTCTTGTCGTTCGGAGTGCAGCTCTCGGACGAGTTTGGCCGGAAAATGG
GCGTGCGGGAGGCGGGAGGCGATTGGTGAATGCTTCGGTTGTTCGAACCC
CTAAGGGTGGAGCCGTGCACCGCATTCCACGATTCCCTCCACTTGCCGAT
CAGGTACATACTTGTTTTGACGAAGGGAACTCTGTCTGTGCCCGCAAGTA
CACCCCCATGATGCCTTTGAAAGGGTCATTATCTGTTTGGCTTGGCCAAC
GAGTCTCATGCTCTCCTCAGATCACACAGCCAGGACCTTCCCTAGTATTT
GGTGCACTTACCTGAGCCCGCCGCGGGGGCTGATACAACATTCGAGCGTC
CAATTGTTTCGTATGTTTCGCACTTTGTATTTCTTTGTCCATTACAACAG
TGTATTCTGCCCAGGTTAGGACTTGGATCTTTTTTTCGCTGTGGTGGCAT
CGTCGTCTTGCGTTTAAATAGCCAACGACATATGGTTCGCGACAACCAAC
AGGGCGAGCGCGGGGTGAAGCAGACACGATGATCCCCTCTGCAGACTTTC
CCCACACACCGCATATCGTGCTGCCCTTGTCTCGGGTACACTTCCTATGC
GTCTAACTGAATTTTCTTAGGGACGGAGTGAGAAGGCCGCAGAAGCGGTG
GCAGCGGCAGCAGCGGCGGCAGCAACTTCATCGTCGCGAAGTGTCCTATC
AGGGGTCGTGCGTCAGGTGCGTGAGGTGAAGCAAGTTTGGGGCACGTCCG
AATCGTTCTCCGAGAGATGTACACCTGTTTCACAGCCAACAGGCTGGCGG
TGATGGTTCATGGGCACGATTTCCCAGTATATATGTCGTGGCTTCTTTGT
CCAACGCTCGAACAAGAGTTGCAGTGAAGCTACTCCGGTGACTTGTGTAC
TTGTATGGGTGTATCACCGCAATGAGTAGAACCCTAACCCAGTGAGAGAA
AATCGCCATGTAACTGCCGTGACATGGGATAGTTGTGTAGTTTTTGCTCT
GTTTTCCGTGACATCCATGTTTGGCTAAGCTTCAAGCTTGTCTGCCCCAT
TGAAGCCATTCTCACGTCGTATCCCATGGCGTCCCGATGCTTGTATGGTG
TGTGGTCTTAGGCGGATCTGCTGTTACGACGGCTACTCGGACCGGACCTG
CTGAGTATGCTGTGTGTCGTGGCGGTATCAGCCGTGAGCATTGTGGGCGT
GTGGAAGGTGGGCTGGCAATCAGACCCGCAGTAGCTCTGCTGTGGTTTAT
TTGGAAACTTTGCACACGCAGGACATATCACGATCTAGGATCTAGCATCC
ACACAAGATGATGTGTCTGTTATAGATCAGCCATTGGCAAACATGTGTAG
ATGATGGATCGATTAAGATCAAATTGAGCTATGATCACAGATCGATCTAC
GTTCAAAGATCAAGAATCACGGAAGCGGGTGGATGATCTATCGTCCACAG
ATCACAGCACCCAACTTGCAAAATGATCTGTCTGTTATAGATCAGCCCTG
GCAAACATGTGTAGATGATCGATCGGTGATGGATCTATCGGTGATAGTCT
ATATCTTTCGGTGTCATATCAACCACTAAAATGATCTCGATCGATTTTGA
AGTGATCTGATCTGTCCCACGTGTGAAACTTTTGAAACGCATGTCGTTGT
TTGCCTCTCACCGGACACCTTCGTTATCCAGCTCGCATTCAGTAGTGCAC
CCCTCACAGCAGCAATTCGCAGGCTTTTGTCGCACATGTAAATTGCCACC
GAAGCCACCAGTACGGCAACCCGCAGCATGCGCAAAACTGCCATTCATGA
CGTTCTGTTGCTCGCATCGAATGACCCGGGGCGCGTTGCTGGCGCGATGT
TCTTTTCTCTTGTCTTGCAGATTGGAGGGAAGCCAGGTCTTGCCACATTG
GTGATGGCTGTCTGCGTCGGACTGTTTGTTCAAAATTGGGACAGAGCCTT
GGATCTGCTGAATCAGGGGCTGGAGCTCGTGGGCGTGAGGCTAGATGGTG
TGCAATCCACCTCCAATGGGAGACGTAAGTGCTGAGTGGACTGCTGCGGG
TCTGTTGTTGTTGTTGCTCTTGACTGCTTTTGGCCGTGCCGTCTTACCTT
CGCTGTGCATAAACTCGACCTTTTTGGTCTTGTTTCTCTAGTTTTGGTCT
TTTTGGCATACACAACAGGAATTATCTTTTTCTCGAGTCCCGCAGCTTCG
AAACGCGCTTCAGGGGTATGAACAGAAGGGTGTCTACGCTGTGTGCTGTG
GGTTGCGTGTGGTTTGGCCGTTTTGCCCTTCTTGCATTCAAGTCGCGTTG
ATCCCAACCACCTGCCTGCAACTGTCCGTCAATGCTGCCACCCTCTCCCC
TCACTACAGAACGATCGGCGTCTTATGCCTCCAGCCGAAGCGACAGGCCG
CGGGCTGAGTCGGCTGCAGCATCGCTAGGCTCTTCGCGTCAACCTCCGAC
CATTCGCGAAGGCCGGCAATGACCCTCGCCACTATCATATGTACAATGTC
AAGAGTTCGGGTATTTTGGCGGTGTGCTTCGACGAGGACACCCAACTAGT
CCTGTGGTAGTCCGCCAAGGAGCGACAGGCTGTTGGTGCACCAAAACCGG
ATGCGACAGTTTTCGCGGTCTTGTTTTGGGGCAGAGTGTGCTCCTGCGTC
CACCGATGGTTATTTTCTAGAGTCACCCACCACACCCGGAGAGCCGGAAA
TACACATGTGGACGTTCACGTTGATAAAATGAGTTTCGAATATTCACTAC
GGAGCAAAAAGTTTTAAGTGTAGATAAATGCAGGAAAGGAAACAGAGTGT
GTGCCAGACGTTGGCATCTAGGCGGAGA

Coding sequence (CDS) from alignment at S-firma_F_contig1004:11979..18056-

>mRNA_S-firma_F_contig1004.106.1 ID=mRNA_S-firma_F_contig1004.106.1|Name=mRNA_S-firma_F_contig1004.106.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2640bp|location=Sequence derived from alignment at S-firma_F_contig1004:11979..18056- (Sphaerotrichia firma ET2_F female)
ATGGAACACGAGGAGGAAGCGATGCATTCAGGAAACAGCACCGAGGAAGA
AGATGGAACACGAGGAGGAAGCGATGCATTCAGGAAACAGCACCGAGGAA
GAAGGCTCTGCCTCTTCGACCCGCCGGAGAAGCGCTCGGCCGCGTTCCGA
GAGAACAACACTTGCAGCGGGGCCACCGCGCCACCGGCACCGGGGCCGTG
CGACCCCGCTCCCACCGGCCTTTCCTCCCCCTGCTAGGGGAATAGCCACT
GTTGGGGGCGATGGTGACGGAGCGTCGATTTCGAGTACATCAAGTCGGTC
CCCGGAGCTCGACCGTTCGAGGGTTGCTGTTGCCGCCGCCGCGGGACTTG
ATGCACCGGCCCATCCAGAGCTCGAGCTGTCGGTTCCATCCCATCAGGAG
CACTTGACCGCTGATGGACAGAGGCTCTGCCTCTTCGACCCGCCGGAGAA
GCGCTCGGCCGCGTTCCGAGAGAACAACACTTGCAGCGGGGCCACCGCGC
CACCGGCACCGGGGCCGTGCGACCCCGCTCCCACCGGCCTTTCCTCCCCC
TGCTAGGGGAATAGCCACTGTTGGGGGCGATGGTGACGGAGCGTCGATTT
CGAGTACATCAAGTCGGTCCCCGGAGCTCGACCGTTCGAGGGTTGCTGTT
GCCGCCGCCGCGGGACTTGATGCACCGGCCCATCCAGAGCTCGAGCTGTC
GGTTCCATCCCATCAGGAGCACTTGACCGCTGATGGACAGAGGTATACAA
CGTACGAGGTGATGGTGCGCATGGGAGGACGGCAGTGGAGCGTGCGAAAG
CGTTACTCACAGTTCGACCAATTTCGCATGGTATACAACGTACGAGGTGA
TGGTGCGCATGGGAGGACGGCAGTGGAGCGTGCGAAAGCGTTACTCACAG
TTCGACCAATTTCGCATGTCGCTTCGGAGACAGCATAAAGAGGTGGGCTC
TTTCCGATTCCCGAATAAGTCCAAGTTCAACACGTTCTCCGAACACACCA
AGTCGCTTCGGAGACAGCATAAAGAGGTGGGCTCTTTCCGATTCCCGAAT
AAGTCCAAGTTCAACACGTTCTCCGAACACACCAAGGAGCGGCGAAGGAC
AGGGTTCGATGAGTTTCTTCGCCTCGTGGAGCGGCGAAGGACAGGGTTCG
ATGAGTTTCTTCGCCTCGTGGCTAACCTGCACCCGCGGCCGGAAGAAGTG
GACGTTTTCTTGGCGATGGACGAGCATGGGGCGGGTGTGCACGGACGGTC
CGGTAGTCGACCACTGGCGTGGACTAGCGCGAAGATCCCCCCACTACATG
CCCCAGACGGCCCTGGCTAACCTGCACCCGCGGCCGGAAGAAGTGGACGT
TTTCTTGGCGATGGACGAGCATGGGGCGGGTGTGCACGGACGGTCCGGTA
GTCGACCACTGGCGTGGACTAGCGCGAAGATCCCCCCACTACATGCCCCA
GACGGCCCTGCTCTCGGACGAGTTTGGCCGGAAAATGGGCGTGCGGGAGG
CGGGAGGCGATTGGTGAATGCTTCGGTTGTTCGAACCCCTAAGGGTGGAG
CCGTGCACCGCATTCCACGATTCCCTCCACTTGCCGATCAGCTCTCGGAC
GAGTTTGGCCGGAAAATGGGCGTGCGGGAGGCGGGAGGCGATTGGTGAAT
GCTTCGGTTGTTCGAACCCCTAAGGGTGGAGCCGTGCACCGCATTCCACG
ATTCCCTCCACTTGCCGATCAGGGACGGAGTGAGAAGGCCGCAGAAGCGG
TGGCAGCGGCAGCAGCGGCGGCAGCAACTTCATCGTCGCGAAGTGTCCTA
TCAGGGGTCGTGCGTCAGGGACGGAGTGAGAAGGCCGCAGAAGCGGTGGC
AGCGGCAGCAGCGGCGGCAGCAACTTCATCGTCGCGAAGTGTCCTATCAG
GGGTCGTGCGTCAGGCGGATCTGCTGTTACGACGGCTACTCGGACCGGAC
CTGCTGAGTATGCTGTGTGTCGTGGCGGTATCAGCCGTGAGCATTGTGGG
CGTGTGGAAGGCGGATCTGCTGTTACGACGGCTACTCGGACCGGACCTGC
TGAGTATGCTGTGTGTCGTGGCGGTATCAGCCGTGAGCATTGTGGGCGTG
TGGAAGATTGGAGGGAAGCCAGGTCTTGCCACATTGGTGATGGCTGTCTG
CGTCGGACTGTTTGTTCAAAATTGGGACAGAGCCTTGGATCTGCTGAATC
AGGGGCTGGAGCTCGTGGGCGTGAGGCTAGATGGTGTGCAATCCACCTCC
AATGGGAGACATTGGAGGGAAGCCAGGTCTTGCCACATTGGTGATGGCTG
TCTGCGTCGGACTGTTTGTTCAAAATTGGGACAGAGCCTTGGATCTGCTG
AATCAGGGGCTGGAGCTCGTGGGCGTGAGGCTAGATGGTGTGCAATCCAC
CTCCAATGGGAGACAACGATCGGCGTCTTATGCCTCCAGCCGAAGCGACA
GGCCGCGGGCTGAGTCGGCTGCAGCATCGCTAGGCTCTTCGCGTCAACCT
CCGACCATTCGCGAAGGCCGGCAATGAAACGATCGGCGTCTTATGCCTCC
AGCCGAAGCGACAGGCCGCGGGCTGAGTCGGCTGCAGCATCGCTAGGCTC
TTCGCGTCAACCTCCGACCATTCGCGAAGGCCGGCAATGA