mRNA_S-firma_F_contig10764.1028.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10764.1028.1 vs. uniprot
Match: A0A0G4EV68_VITBC (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EV68_VITBC) HSP 1 Score: 105 bits (263), Expect = 1.200e-26 Identity = 49/106 (46.23%), Postives = 63/106 (59.43%), Query Frame = 1
Query: 1 PTPAPTPRDFTCAELAKFDGKQGRPMYTACHGTVFDMGSHPDGLGYYGKGMPYNCFIGIDASLLFARVILDVEKARENP--TLTAMERDTMLDWHAKFEMKYHIVG 312
P P P P+DF+ EL+++DG+ GRP+Y A G VFDM SHP G +YG G YNCF G DAS AR+ + + L A E+ + DW KFE KY +VG
Sbjct: 58 PKPDPCPKDFSLEELSQYDGRDGRPIYIAVRGKVFDMTSHPSGRDFYGPGAGYNCFAGKDASRALARMSFEASEMNRTDWDDLAASEKQVLADWETKFESKYDVVG 163
BLAST of mRNA_S-firma_F_contig10764.1028.1 vs. uniprot
Match: A0A0G4FB31_9ALVE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FB31_9ALVE) HSP 1 Score: 99.8 bits (247), Expect = 2.090e-24 Identity = 48/106 (45.28%), Postives = 62/106 (58.49%), Query Frame = 1
Query: 1 PTPAPTPRDFTCAELAKFDGKQGRPMYTACHGTVFDMGSHPDGLGYYGKGMPYNCFIGIDASLLFARVILDVEKARENP--TLTAMERDTMLDWHAKFEMKYHIVG 312
P P P P+DFT AELA+FDG G+P+Y C G V+DM SHPDG YG G YN F G DA+ FA+ D ++ + L E + + W KF+ KY +VG
Sbjct: 50 PKPNPCPKDFTPAELAEFDGSDGKPVYIGCKGVVYDMTSHPDGRTMYGPGGSYNVFAGKDATRAFAKFNFDQQEMNKGDWSDLNVFENEMLQSWVDKFDSKYDVVG 155
BLAST of mRNA_S-firma_F_contig10764.1028.1 vs. uniprot
Match: A0A0G4FF53_9ALVE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FF53_9ALVE) HSP 1 Score: 88.2 bits (217), Expect = 3.050e-20 Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = 1
Query: 22 RDFTCAELAKFDGKQGRPMYTACHGTVFDMGSHPDGLGYYGKGMPYNCFIGIDASLLFARVILDV-EKAREN-PTLTAMERDTMLDWHAKFEMKYHIVG 312
+DFT AEL+KF G+ G P+Y A GTV+DM SHP G +YG G Y+ F G DAS ++ + E RE+ +++ E+ T+ +W AK++ KY +VG
Sbjct: 15 KDFTLAELSKFTGEDGGPVYIAVRGTVYDMTSHPTGRNFYGPGAGYHVFAGKDASRALGKMSFEASEMNREDWDDMSSEEKQTLDEWEAKYKQKYTVVG 113
BLAST of mRNA_S-firma_F_contig10764.1028.1 vs. uniprot
Match: A0A7S4GHQ8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GHQ8_9EUGL) HSP 1 Score: 79.7 bits (195), Expect = 1.180e-16 Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 1
Query: 7 PAPTPRDFTCAELAKFDGKQGRPMYTACHGTVFDMGSHPDGLGYYGKGMPYNCFIGIDASLLFARVILDVEKAREN-PTLTAMERDTMLDWHAKFEMKYHIVG 312
P P PRDFT EL+KF G+ G P+Y + V+++ +YG GM YN F G+D ++ R + A E+ LT E +T W AKF+ KY +VG
Sbjct: 48 PKPEPRDFTAEELSKFKGENGSPVYLSLKNIVYEVSP-----SFYGPGMGYNVFAGVDCTIPLGRSDISTNGANEDWSILTPSELETASSWEAKFQSKYDVVG 145
BLAST of mRNA_S-firma_F_contig10764.1028.1 vs. uniprot
Match: A0A2R5G7H8_9STRA (NADH-cytochrome b5 reductase 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G7H8_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 4.200e-16 Identity = 49/105 (46.67%), Postives = 64/105 (60.95%), Query Frame = 1
Query: 19 PRDFTCAELAKFDGKQGRPMYTACHGTVFDMGSHPDGLGYYGKGMPYNCFIGIDASLLFARVILDVEKARENPTL---TAMERDTMLDWHAKFEMKYHIVGYLTD 324
PR+FT ELA+F+ K GRP+Y A G ++D+ P+ +YG+G PY G DAS A V LD EN +L T M+ +T+ +W AKFEMKY VGYL D
Sbjct: 116 PRNFTKEELAQFNSKNGRPVYIAAKGVIYDV--DPE---FYGEGGPYEMMAGKDASRALALVSLDPADV-ENTSLEGLTWMDLNTLDEWIAKFEMKYTRVGYLID 214
BLAST of mRNA_S-firma_F_contig10764.1028.1 vs. uniprot
Match: A0A7S2WTU8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WTU8_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 6.160e-14 Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 1
Query: 19 PRDFTCAELAKFDGKQGRPMYTACHGTVFDMGSHPDGLGYYGKGMPYNCFIGIDASLLFARVILDVEKARENPTLTAM---ERDTMLDWHAKFEMKYHIVGYLTD 324
PR+FT A+LA FDG+ GRP+Y G V+D+ PD +YG Y G DA+ A V LD E EN + + ++ T+ +W +KFE KY +VGYL D
Sbjct: 108 PRNFTKAQLAAFDGRDGRPVYVCAKGVVYDV--DPD---FYGPEGAYGIMAGKDATRALALVSLDPEDF-ENTRIDDLSWGDKQTLEEWVSKFEFKYPVVGYLVD 206
BLAST of mRNA_S-firma_F_contig10764.1028.1 vs. uniprot
Match: PGRC1_HUMAN (Membrane-associated progesterone receptor component 1 n=96 Tax=Eutheria TaxID=9347 RepID=PGRC1_HUMAN) HSP 1 Score: 73.6 bits (179), Expect = 6.960e-14 Identity = 45/110 (40.91%), Postives = 58/110 (52.73%), Query Frame = 1
Query: 1 PTPAPTPRDFTCAELAKFDGKQGRPMYTACHGTVFDMGSHPDGLGYYGKGMPYNCFIGIDASLLFARVILDVEKAREN----PTLTAMERDTMLDWHAKFEMKYHIVGYL 318
P P RDFT AEL +FDG Q + A +G VFD+ G +YG PY F G DAS A LD E ++ LTA +++T+ DW ++F KYH VG L
Sbjct: 64 PLPRLKRRDFTPAELRRFDGVQDPRILMAINGKVFDV---TKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKL 170
BLAST of mRNA_S-firma_F_contig10764.1028.1 vs. uniprot
Match: A0A0L0HVM5_SPIPD (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HVM5_SPIPD) HSP 1 Score: 72.8 bits (177), Expect = 1.180e-13 Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 1
Query: 1 PTPAPTPRDFTCAELAKFDGKQGR-PMYTACHGTVFDMGSHPDGLGYYGKGMPYNCFIGIDASLLFARVILDVEKA-RENPTLTAMERDTMLDWHAKFEMKYHIVGYLTD 324
PT P ++FT AELA++DG P+Y A GTVFD+ + D Y G Y+ F G DAS + L E+ + +LTA E +T+ W A ++ KY+IVG + D
Sbjct: 81 PTQPPGDKEFTAAELARYDGTNAELPVYLAVKGTVFDVTKNRD---MYSPGKGYHVFAGKDASQALGKSSLKPEECVPDYSSLTAEEMETLNKWEAHYKKKYNIVGKVVD 187
BLAST of mRNA_S-firma_F_contig10764.1028.1 vs. uniprot
Match: A0A2R5GTM7_9STRA (Membrane-associated progesterone receptor component 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GTM7_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.950e-13 Identity = 41/101 (40.59%), Postives = 55/101 (54.46%), Query Frame = 1
Query: 22 RDFTCAELAKFDGKQGRPMYTACHGTVFDMGSHPDGLGYYGKGMPYNCFIGIDASLLFARVILDVEKARENPT--LTAMERDTMLDWHAKFEMKYHIVGYL 318
RDF+ AELAKF+G G P+Y A G VFD+ S G+YG Y G DAS A++ LD + + T L++ E + +W+ K KY IVG L
Sbjct: 5 RDFSRAELAKFNGHDGEPVYIALKGVVFDVSSS----GFYGPDGGYALLAGRDASRALAKMKLDPDLVHDPRTDDLSSAETALLTEWYDKLSAKYPIVGSL 101
BLAST of mRNA_S-firma_F_contig10764.1028.1 vs. uniprot
Match: A0A139AY04_GONPJ (Cytochrome b5 n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AY04_GONPJ) HSP 1 Score: 72.0 bits (175), Expect = 2.010e-13 Identity = 43/106 (40.57%), Postives = 60/106 (56.60%), Query Frame = 1
Query: 22 RDFTCAELAKFDGKQGRPMYTACHGTVFDMGSHPDGLGYYGKGMPYNCFIGIDASLLFARVILDVEKAR--ENPT-----LTAMERDTMLDWHAKFEMKYHIVGYL 318
R++T A+LA+FDG +G+ + A +G VFD+ G +YG G PY F G DAS A+ ++E R + P LT ERD ML+W + F KY VG+L
Sbjct: 60 REYTPADLAEFDGTEGKAIKFAVNGKVFDVSR---GRNFYGPGGPYGNFAGRDASRGMAKQSFELENIRAPDEPIDPLDDLTKEERDNMLEWESHFLHKYDHVGWL 162 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10764.1028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10764.1028.1 >prot_S-firma_F_contig10764.1028.1 ID=prot_S-firma_F_contig10764.1028.1|Name=mRNA_S-firma_F_contig10764.1028.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=109bp PTPAPTPRDFTCAELAKFDGKQGRPMYTACHGTVFDMGSHPDGLGYYGKGback to top mRNA from alignment at S-firma_F_contig10764:4365..4812- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10764.1028.1 ID=mRNA_S-firma_F_contig10764.1028.1|Name=mRNA_S-firma_F_contig10764.1028.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=448bp|location=Sequence derived from alignment at S-firma_F_contig10764:4365..4812- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10764:4365..4812- >mRNA_S-firma_F_contig10764.1028.1 ID=mRNA_S-firma_F_contig10764.1028.1|Name=mRNA_S-firma_F_contig10764.1028.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=654bp|location=Sequence derived from alignment at S-firma_F_contig10764:4365..4812- (Sphaerotrichia firma ET2_F female)back to top |