mRNA_S-firma_F_contig10750.1015.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10750.1015.1
Unique NamemRNA_S-firma_F_contig10750.1015.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10750.1015.1 vs. uniprot
Match: A0A6C0BL48_9ZZZZ (Nudix hydrolase domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BL48_9ZZZZ)

HSP 1 Score: 255 bits (651), Expect = 2.600e-82
Identity = 123/225 (54.67%), Postives = 160/225 (71.11%), Query Frame = 1
Query:   49 VAISGEPGVDVDAATSSPLFRDWLAGLDATMDVAAVHFQSLDMFGPRVGFIKFRATATCGGKPVPGVVFMRGGAVAVLVLLSCGDELYTVLCRQPRMPIGRVAFPEIPAGMLDGSGHFAGVAAKEMEEETGLKMAAEDLIDLTQLAYGDAYPGVYPSVGGCDEFLRMFLYRKEVSREEITALQGKLTGNPDEAEHIVLQVVPYADMWKLTSDAKTLAAMFLYEKL 723
            V +    G+D+     S LF+DW + L+A + V  +  QS+D FGPRVGF+K     T  GK +PG+ F+RGGAV++LV+L C DE + +  RQPR+P+GR    E+PAGMLDGSG FAGVAAKEM+EETGL + + DLIDLT LA GD   GVYPS GGCDEFLR  L+R+ V+R E+ A++GK TGN DE E IVL +V Y  MW++ +D K L++MFLYE+L
Sbjct:   11 VPVEAADGIDLQRCIDSKLFKDWASSLEAELKVENIRVQSVDYFGPRVGFLKIETITTFHGKRIPGICFLRGGAVSILVILQCEDEEWVLCTRQPRVPVGRADLLELPAGMLDGSGAFAGVAAKEMKEETGLDLTSADLIDLTGLALGD---GVYPSPGGCDEFLRFMLHRRAVTRSELDAMRGKATGNLDEGEVIVLDLVEYKKMWRVCNDVKALSSMFLYERL 232          
BLAST of mRNA_S-firma_F_contig10750.1015.1 vs. uniprot
Match: A0A5A8E981_CAFRO (Nudix hydrolase domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E981_CAFRO)

HSP 1 Score: 242 bits (618), Expect = 2.930e-76
Identity = 130/271 (47.97%), Postives = 168/271 (61.99%), Query Frame = 1
Query:    1 ASPTSMASPVTLRGAPVAISGEPGVDVDAATSSPLFRDWLAGLDATMDVAAVHFQSLDMFGP----RVGFIKFRATATCGGKPVPGVVFMRGGAVAVLVLLSCGDELYTVLCRQPRMPIGRVAFPEIPAGMLDGSGHFAGVAAKEMEEETGLKMAAEDLIDLTQLAYG--------------------DAYPG------VYPSVGGCDEFLRMFLYRKEVSREEITALQGKLTGNPDEAEHIVLQVVPYADMWKLTSDAKTLAAMFLYEKL 723
            A P   A+  T+RG  V +S EPG D   AT S +FR+W   L   +DV +VH QS+D+FG     R+GF+KF A+    G P PG+VFMRGGAV VL++L    + Y ++ RQPR+PI    F EIPAGMLDGSG FAG AAKE+EEETG+ + A  L+DLT LAYG                    DA  G      +YPS G CDEFLR+FL+RK +S+ E+  LQ ++ G   EAE I L+VVP  ++W+ T D K+L+A+ LYEKL
Sbjct:   38 AHPKPCATETTIRGKQVPVSSEPGADACVATRSVVFRNWADSLPENVDVESVHVQSVDLFGKPPKQRLGFVKFSASVKVDGHPAPGIVFMRGGAVCVLMVLESEGQEYALVTRQPRLPIASSGFDEIPAGMLDGSGAFAGTAAKELEEETGIVVDASQLVDLTHLAYGATPRSRVLRPLHKDASEGESDAAAGEAMCEGIYPSPGACDEFLRVFLFRKRMSKAELADLQSRIYGATHEAERIALRVVPLGELWRWTPDCKSLSALMLYEKL 308          
BLAST of mRNA_S-firma_F_contig10750.1015.1 vs. uniprot
Match: A0A7S0ECS1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0ECS1_9CRYP)

HSP 1 Score: 240 bits (612), Expect = 3.360e-76
Identity = 119/207 (57.49%), Postives = 155/207 (74.88%), Query Frame = 1
Query:  106 FRDWLAGLDATMDVAAVHFQSLDMFGPRVGFIKFRATA-TCGGKPVPGVVFMRGGAVAVLVLLSCGD--ELYTVLCRQPRMPIGRVAFPEIPAGMLDGSGHFAGVAAKEMEEETGLKMAAEDLIDLTQLAYGDAYPGVYPSVGGCDEFLRMFLYRKEVSREEITALQGKLTGNPDEAEHIVLQVVPYADMWKLTSDAKTLAAMFLYE 717
            F DW   +D  + V+ V  QS+D+FGPR+GFIKF+A A T  GK VPG+VFMRGGAVA+L++++C +  + Y++L  QPR+P+GR +  E+PAGMLD SG F GVAAKE+EEETGLK+  +DLIDLT+ A+G + PGVYPS GGCDEFLR+FLYR ++  EEI+ LQ K TG  +E E I L+VVP  D+WK   D K L+A+ LYE
Sbjct:   35 FNDWCREMDEELVVSKVVVQSIDLFGPRIGFIKFKAEAKTKDGKAVPGIVFMRGGAVAMLIVITCKETKKQYSLLTVQPRVPVGRASLYELPAGMLDSSGDFVGVAAKELEEETGLKVQKKDLIDLTEKAFGGSCPGVYPSAGGCDEFLRIFLYRTKMEPEEISGLQDKCTGVLEEGEVIKLKVVPLDDLWKTCPDVKALSALCLYE 241          
BLAST of mRNA_S-firma_F_contig10750.1015.1 vs. uniprot
Match: L1J4X5_GUITC (Nudix hydrolase domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J4X5_GUITC)

HSP 1 Score: 235 bits (599), Expect = 1.180e-74
Identity = 112/209 (53.59%), Postives = 154/209 (73.68%), Query Frame = 1
Query:  106 FRDWLAGLDATMDVAAVHFQSLDMFGPRVGFIKFRATATC-GGKPVPGVVFMRGGAVAVLVLLSCGD--ELYTVLCRQPRMPIGRVAFPEIPAGMLDGSGHFAGVAAKEMEEETGLKMAAEDLIDLTQLAYGDAYPGVYPSVGGCDEFLRMFLYRKEVSREEITALQGKLTGNPDEAEHIVLQVVPYADMWKLTSDAKTLAAMFLYEKL 723
            F DW   +D  + V+ V  QS+D+FGPR+GF+KF+A AT   GKPVPG+VFMRGGAVA+ ++++C +  + YT+L  QPR+P+G+ A  E+PAGMLD SG F G+AAKE+EEET LK+  +DL+DLT++A+G    G+YPS GGCDE+LR+FLYR  +S +EI++L  K TG  +E E I L+V+P  D+W L  D K L+A+ LY KL
Sbjct:    4 FNDWCREMDEELVVSKVVVQSIDLFGPRIGFLKFKAEATTRDGKPVPGIVFMRGGAVAIFIVITCKESKKQYTLLTVQPRVPVGKAALYELPAGMLDNSGDFVGMAAKELEEETSLKVQKKDLMDLTEMAFGSGCLGIYPSAGGCDEYLRIFLYRATMSPQEISSLHDKCTGVLEEGETIKLKVIPIDDLWSLAPDGKALSALCLYTKL 212          
BLAST of mRNA_S-firma_F_contig10750.1015.1 vs. uniprot
Match: D3B5T8_POLPP (Nudix hydrolase domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B5T8_POLPP)

HSP 1 Score: 236 bits (601), Expect = 1.320e-74
Identity = 118/240 (49.17%), Postives = 165/240 (68.75%), Query Frame = 1
Query:   22 SPVTLRGAPVAISGEPGVDVDAATSSPLFRDWLAGLDAT--MDVAAVHFQSLDMFGPRVGFIKFRA--TATCGGKPVPGVVFMRGGAVAVLVLLSCGD--ELYTVLCRQPRMPIGRVAFPEIPAGMLDGSGHFAGVAAKEMEEETGLKMAAEDLIDLTQLAYGDAYPGVYPSVGGCDEFLRMFLYRKEVSREEITALQGKLTGNPDEAEHIVLQVVPYADMWKLTSDAKTLAAMFLYEKL 723
            S +T+RG  V ++    +  + A S+P F  W   ++    + V ++  QS+DMFG  VGF+KF+A   A    +PVPG++F RGG+VA+LV+L+  +    Y+VL  Q R+P+ R A+ EIPAGMLDGSGHF GVAAKEM+EETG+++  + L+DLTQLAYGD   G+YPS GGCDEF+R+FL+R  + + +I  LQ K TG  +E E I L +VP  D+WK + D KTL+++FLYEKL
Sbjct:    2 STITIRGNTVPVTFASDIPAETALSAPNFVKWTKRMETQDKLKVNSIQVQSIDMFGKNVGFLKFKAEVVALPENRPVPGIIFCRGGSVAILVILTSKETGRQYSVLTVQSRVPVARFAYSEIPAGMLDGSGHFVGVAAKEMKEETGIEVTEDKLVDLTQLAYGDTAEGMYPSPGGCDEFIRLFLFRDTLEQSKIDELQNKCTGALEENESITLDIVPLEDLWKKSPDGKTLSSLFLYEKL 241          
BLAST of mRNA_S-firma_F_contig10750.1015.1 vs. uniprot
Match: A0A7S0QJH0_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QJH0_9CRYP)

HSP 1 Score: 236 bits (601), Expect = 2.010e-74
Identity = 108/209 (51.67%), Postives = 153/209 (73.21%), Query Frame = 1
Query:  106 FRDWLAGLDATMDVAAVHFQSLDMFGPRVGFIKFRA-TATCGGKPVPGVVFMRGGAVAVLVLLSCGDEL--YTVLCRQPRMPIGRVAFPEIPAGMLDGSGHFAGVAAKEMEEETGLKMAAEDLIDLTQLAYGDAYPGVYPSVGGCDEFLRMFLYRKEVSREEITALQGKLTGNPDEAEHIVLQVVPYADMWKLTSDAKTLAAMFLYEKL 723
            F DW   +D    +  +  QS+DMFGPR+GF+KF++  A   G  +PG+VFMRGGAV +++L+ C ++   YTVL  QPR P+G+  FPE+PAGMLD SG FAGVAAKE++EETG+ ++ +DL+DLT++A+G +Y GVYPS GGCDEFLR+FLYR ++++EEI  LQGK TG  +E E I L+++   ++W+   D K L+A+ +YE L
Sbjct:   35 FADWSKSVDKEFILKNITIQSIDMFGPRIGFVKFKSEVADSQGNALPGIVFMRGGAVGMMILIVCEEDRKQYTVLTVQPRFPVGKFNFPELPAGMLDDSGDFAGVAAKELQEETGITVSTKDLVDLTEMAFGSSYQGVYPSAGGCDEFLRLFLYRTKMAKEEINKLQGKCTGVLEEGEQIKLKIISINELWRAAPDVKALSALCIYENL 243          
BLAST of mRNA_S-firma_F_contig10750.1015.1 vs. uniprot
Match: A0A6C0BJC0_9ZZZZ (Nudix hydrolase domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BJC0_9ZZZZ)

HSP 1 Score: 234 bits (597), Expect = 8.910e-74
Identity = 114/252 (45.24%), Postives = 165/252 (65.48%), Query Frame = 1
Query:   28 VTLRGAPVAI-SGEPGVDVDAATSSPLFRDWLAGLDATMDVAAVHFQSLDMFGPRVGFIKFRATATCGGKPVPGVVFMRGGAVAVLVLLSCGDELYTVLCRQPRMPIGRVAFPEIPAGMLDGSGHFAGVAAKEMEEETGLKMAAEDLIDLTQLAYGDAYP-------------------GVYPSVGGCDEFLRMFLYRKEVSREEITALQGKLTGNPDEAEHIVLQVVPYADMWKLTSDAKTLAAMFLYEKL 723
            V++ G  V + S  P +D+     +  F +W+A LD  +DV+ +     D FG R+GF+K  A   C G PVPG++FMRGGAV++L++L C D+ + V  RQ R+PIG+  F E+PAGMLD SG F G+AAKE+EEETG+++ A DLID+T L Y    P                   G+YPS GGCDEF+R+ L+ K+V+++E+ +LQGKLTG  +E E IVL++VPY  +W++TSDAK L+++ L++ L
Sbjct:    6 VSVNGNDVPVMSPNPELDIAFCVKATPFVNWIATLDRGLDVSKIIIHGADYFGSRIGFLKLEAVTKCNGNPVPGIIFMRGGAVSILLILHCRDQGWIVCTRQARVPIGKTNFLELPAGMLDDSGDFVGIAAKELEEETGIRLKATDLIDMTALTYYPPLPHHTEEAGAKVIRDKSTPLKGMYPSAGGCDEFIRLMLHEKKVTQDELESLQGKLTGCAEEGEKIVLELVPYEMLWRVTSDAKALSSLLLFQNL 257          
BLAST of mRNA_S-firma_F_contig10750.1015.1 vs. uniprot
Match: L1J5D6_GUITC (Nudix hydrolase domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J5D6_GUITC)

HSP 1 Score: 233 bits (593), Expect = 2.370e-73
Identity = 111/207 (53.62%), Postives = 152/207 (73.43%), Query Frame = 1
Query:  106 FRDWLAGLDATMDVAAVHFQSLDMFGPRVGFIKFRATATC-GGKPVPGVVFMRGGAVAVLVLLSCGD--ELYTVLCRQPRMPIGRVAFPEIPAGMLDGSGHFAGVAAKEMEEETGLKMAAEDLIDLTQLAYGDAYPGVYPSVGGCDEFLRMFLYRKEVSREEITALQGKLTGNPDEAEHIVLQVVPYADMWKLTSDAKTLAAMFLYE 717
            F DW   +D  + V+ V  QS+D+FGPR+GF+KF+A AT   GK VPG+VFMRGGAVA+ ++++C +  + YT+L  QPR+P+G+ A  E+PAGMLD SG F G+AAKE+EEET LK+  +DL+DLT+ A+G   PG+YPS GGCDE+LR+FLYR  +S EEI++L  K TG  +E E I L+V+P  D+W+   D K L+A+ LYE
Sbjct:   33 FNDWCREMDEELVVSKVVVQSIDLFGPRIGFLKFKAEATTRDGKHVPGIVFMRGGAVAIFIVITCKESKKQYTLLTVQPRVPVGKAALYELPAGMLDNSGDFVGMAAKELEEETSLKVQKKDLMDLTEKAFGSGCPGIYPSAGGCDEYLRIFLYRTTMSPEEISSLHDKCTGVLEEGETIKLKVIPIDDLWRTAPDVKALSALCLYE 239          
BLAST of mRNA_S-firma_F_contig10750.1015.1 vs. uniprot
Match: UPI0006451BB3 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006451BB3)

HSP 1 Score: 230 bits (586), Expect = 3.510e-72
Identity = 118/240 (49.17%), Postives = 170/240 (70.83%), Query Frame = 1
Query:   28 VTLRGAPVAISGEPGVDV--DAATSSPLFRDWLAGLDAT--MDVAAVHFQSLDMFGPRVGFIKFRAT--ATCGGKPVPGVVFMRGGAVAVLVLLSCGD--ELYTVLCRQPRMPIGRVAFPEIPAGMLDGSGHFAGVAAKEMEEETGLKMAAEDLIDLTQLAYGDAYPGVYPSVGGCDEFLRMFLYRKEVSREEITALQGKLTGNPDEAEHIVLQVVPYADMWKLTSDAKTLAAMFLYEKL 723
            V++RG  V ++  P +DV    A ++P F+ W+  +D    + V ++  QS+DMFGP VGF+KF+A   A    +PVPG++F RGG+VA+LV+L+  +  + Y++L  Q R+P    A+ EIPAGMLDGSGHFAGVAAKEM+EETG+ +  + LID+T+LA+GD+  G+YPS GGCDEF+R+FL+R  + + +I  LQ KLTG   E E I L VVP+ ++W+ + D KTL+++FLYEKL
Sbjct:   13 VSIRGENVPVTLVPSLDVPIQTAVNAPNFQKWIKKMDKQDQLKVNSILIQSIDMFGPNVGFLKFKAEVHALPEKRPVPGIIFCRGGSVAILVILTSKETGKEYSLLTVQTRVPAATFAYSEIPAGMLDGSGHFAGVAAKEMKEETGIDVTEDRLIDMTKLAFGDSAEGMYPSPGGCDEFIRLFLFRDTLEQAKIDELQNKLTGCLSENESITLHVVPFDELWRRSPDGKTLSSLFLYEKL 252          
BLAST of mRNA_S-firma_F_contig10750.1015.1 vs. uniprot
Match: F4PK36_CAVFA (Nudix hydrolase domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PK36_CAVFA)

HSP 1 Score: 240 bits (613), Expect = 4.680e-72
Identity = 126/240 (52.50%), Postives = 170/240 (70.83%), Query Frame = 1
Query:   28 VTLRGAPVAISGEPG--VDVDAATSSPLFRDWLAGLDATMD--VAAVHFQSLDMFGPRVGFIKFRA--TATCGGKPVPGVVFMRGGAVAVLVLLSC--GDELYTVLCRQPRMPIGRVAFPEIPAGMLDGSGHFAGVAAKEMEEETGLKMAAEDLIDLTQLAYGDAYPGVYPSVGGCDEFLRMFLYRKEVSREEITALQGKLTGNPDEAEHIVLQVVPYADMWKLTSDAKTLAAMFLYEKL 723
            +T+RG PV +S  P   V V+ A  +P F  W+  ++A     V  V FQS+DMFG  VGF+KF+A   A    +PVPG+VF RGG+VA+LV+L     ++ Y++L  Q R+P+G+ ++ EIPAGMLDGSGHF GVAAKEM+EETGL+++ E LIDLTQLAYG+   G+YPS GGCDEF+R+FL+R+ + + +I  L+ KLTG   E E I L VVP  D+WK + D KTL+A++LYEKL
Sbjct:   47 ITIRGKPVTVSVVPSFEVPVETARDAPNFVKWVKRVEAEEQLLVKNVLFQSVDMFGKNVGFLKFKAEVVALPENRPVPGIVFCRGGSVAILVILKSKESNKEYSLLTVQTRVPVGKFSYSEIPAGMLDGSGHFVGVAAKEMKEETGLEVSEEKLIDLTQLAYGNEVEGMYPSPGGCDEFIRLFLFRETLEQAKIDELKNKLTGCLSENESITLNVVPLEDLWKTSPDGKTLSALYLYEKL 286          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10750.1015.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6C0BL48_9ZZZZ2.600e-8254.67Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A5A8E981_CAFRO2.930e-7647.97Nudix hydrolase domain-containing protein n=5 Tax=... [more]
A0A7S0ECS1_9CRYP3.360e-7657.49Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
L1J4X5_GUITC1.180e-7453.59Nudix hydrolase domain-containing protein n=2 Tax=... [more]
D3B5T8_POLPP1.320e-7449.17Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S0QJH0_9CRYP2.010e-7451.67Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A6C0BJC0_9ZZZZ8.910e-7445.24Nudix hydrolase domain-containing protein n=1 Tax=... [more]
L1J5D6_GUITC2.370e-7353.62Nudix hydrolase domain-containing protein n=2 Tax=... [more]
UPI0006451BB33.510e-7249.17hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F4PK36_CAVFA4.680e-7252.50Nudix hydrolase domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10750contigS-firma_F_contig10750:3565..4855 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog55529.EKX43561
PFAMsNUDIX
Max annot lvl2759|Eukaryota
KEGG rclassRC00002
KEGG koko:K18447
KEGG ReactionR00951,R01885,R02677
KEGG Pathwayko00051,ko00230,ko00500,ko01100,ko01110,map00051,map00230,map00500,map01100,map01110
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019144,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0080041,GO:0080042
Evalue1.62e-75
EggNOG OGsCOG0494@1|root,KOG3041@2759|Eukaryota
EC3.6.1.21
DescriptionADP-glucose pyrophosphohydrolase activity
COG categoryL
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons4
Model size747
Cds size732
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10750.1015.1prot_S-firma_F_contig10750.1015.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10750 3565..4840 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815617.1390731-CDS-S-firma_F_contig10750:3564..37931622815617.1390731-CDS-S-firma_F_contig10750:3564..3793Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10750 3565..3793 -
1696949456.747694-CDS-S-firma_F_contig10750:3564..37931696949456.747694-CDS-S-firma_F_contig10750:3564..3793Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10750 3565..3793 -
1622815617.1522973-CDS-S-firma_F_contig10750:3857..41651622815617.1522973-CDS-S-firma_F_contig10750:3857..4165Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10750 3858..4165 -
1696949456.766413-CDS-S-firma_F_contig10750:3857..41651696949456.766413-CDS-S-firma_F_contig10750:3857..4165Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10750 3858..4165 -
1622815617.162546-CDS-S-firma_F_contig10750:4241..43411622815617.162546-CDS-S-firma_F_contig10750:4241..4341Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10750 4242..4341 -
1696949456.7754242-CDS-S-firma_F_contig10750:4241..43411696949456.7754242-CDS-S-firma_F_contig10750:4241..4341Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10750 4242..4341 -
1622815617.180669-CDS-S-firma_F_contig10750:4745..48401622815617.180669-CDS-S-firma_F_contig10750:4745..4840Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10750 4746..4840 -
1696949456.7847466-CDS-S-firma_F_contig10750:4745..48401696949456.7847466-CDS-S-firma_F_contig10750:4745..4840Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10750 4746..4840 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815617.191563-UTR-S-firma_F_contig10750:4840..48551622815617.191563-UTR-S-firma_F_contig10750:4840..4855Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10750 4841..4855 -
1696949456.796387-UTR-S-firma_F_contig10750:4840..48551696949456.796387-UTR-S-firma_F_contig10750:4840..4855Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10750 4841..4855 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10750.1015.1

>prot_S-firma_F_contig10750.1015.1 ID=prot_S-firma_F_contig10750.1015.1|Name=mRNA_S-firma_F_contig10750.1015.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=244bp
MASPVTLRGAPVAISGEPGVDVDAATSSPLFRDWLAGLDATMDVAAVHFQ
SLDMFGPRVGFIKFRATATCGGKPVPGVVFMRGGAVAVLVLLSCGDELYT
VLCRQPRMPIGRVAFPEIPAGMLDGSGHFAGVAAKEMEEETGLKMAAEDL
IDLTQLAYGDAYPGVYPSVGGCDEFLRMFLYRKEVSREEITALQGKLTGN
PDEAEHIVLQVVPYADMWKLTSDAKTLAAMFLYEKLAPTLPPK*
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mRNA from alignment at S-firma_F_contig10750:3565..4855-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10750.1015.1 ID=mRNA_S-firma_F_contig10750.1015.1|Name=mRNA_S-firma_F_contig10750.1015.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1291bp|location=Sequence derived from alignment at S-firma_F_contig10750:3565..4855- (Sphaerotrichia firma ET2_F female)
GCCTCTCCCACAAGCATGGCCTCCCCAGTCACCCTCCGTGGTGCCCCAGT GGCCATATCAGGGGAGCCTGGTGTCGATGTAGATGCAGCCACTTCTTCCC CTTTGTTCCGGTGAGGCCACACACTCCACACTCTCTTTCTCTCCCACCTC CTTCCTTCCTTCACTGTGACTGCGTGCCTGTGTAGTCTTCAACACTCCCT TCTTTTCTTTCATTCCTGCTTGCCTTTGTGTGTGTGTATGGCTGCTTCTT TTTTGCTTACTTCTGTCGACCGCTGCGCAAGGTTGTTGTGAAGGTTTGCC ACTCAGGCGCGCCCTTGACTGGGTCGGAGGGCTTGCTCCTTGCTCCTGTG TGTACGTCGCCACCGTGCCATGCGCGCAGATGCAGGCCAGTCGCTGACCG CGAGGTGTGGTTTCTGACGATGTTATATTTTTCGATTACGCTTGACGCCG GCATATGCGCCCTCCGCCATTCTCTGCACCAAGCCCAACACAGCTTTGCT GACACCCTCCGCAGGGACTGGCTGGCTGGCCTGGATGCCACCATGGACGT CGCCGCCGTGCACTTTCAGTCGCTGGACATGTTCGGGCCCCGGGTTGGCT TCATCAAGTTTCGGGTGCGTTTGTGGCAGGATGGGCCCCCCTTCGCCCCT GGTCACCTCCTGACCCCTCCACGTTTTGCTTTGCTTGCAGGCGACGGCAA CGTGTGGGGGGAAGCCCGTCCCTGGGGTTGTGTTCATGCGTGGTGGCGCG GTGGCGGTGCTGGTGCTGCTGTCTTGCGGAGACGAGCTGTACACAGTCCT GTGTCGGCAGCCCCGCATGCCCATCGGCCGGGTGGCCTTCCCGGAGATTC CGGCGGGCATGCTGGACGGCTCGGGGCACTTTGCGGGCGTGGCTGCGAAG GAAATGGAGGAGGAAACCGGGCTCAAAATGGCGGCAGAGGACCTCATTGA CCTTACACAGCTGGCGTACGGCGACGCGTACCCAGGCGTGTACCCAAGGT GCGCAGCCCCTCCTGACCCCATGTTTGGTTGTTGGAACAGCGGTGACCGC CCCCTCCCGCAGCGTTGGCGGCTGTGACGAGTTCCTCCGCATGTTTCTGT ATCGGAAGGAGGTGTCGCGGGAGGAGATCACGGCGTTGCAGGGCAAGCTG ACGGGCAACCCCGACGAAGCGGAGCACATCGTTCTGCAGGTGGTGCCGTA CGCGGACATGTGGAAGCTCACGTCTGACGCAAAAACCTTAGCCGCCATGT TCCTGTACGAAAAGCTGGCACCAACCCTGCCCCCAAAATGA
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Coding sequence (CDS) from alignment at S-firma_F_contig10750:3565..4855-

>mRNA_S-firma_F_contig10750.1015.1 ID=mRNA_S-firma_F_contig10750.1015.1|Name=mRNA_S-firma_F_contig10750.1015.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1464bp|location=Sequence derived from alignment at S-firma_F_contig10750:3565..4855- (Sphaerotrichia firma ET2_F female)
ATGGCCTCCCCAGTCACCCTCCGTGGTGCCCCAGTGGCCATATCAGGGGA
GCCTGGTGTCGATGTAGATGCAGCCACTTCTTCCCCTTTGTTCCGATGGC
CTCCCCAGTCACCCTCCGTGGTGCCCCAGTGGCCATATCAGGGGAGCCTG
GTGTCGATGTAGATGCAGCCACTTCTTCCCCTTTGTTCCGGGACTGGCTG
GCTGGCCTGGATGCCACCATGGACGTCGCCGCCGTGCACTTTCAGTCGCT
GGACATGTTCGGGCCCCGGGTTGGCTTCATCAAGTTTCGGGGACTGGCTG
GCTGGCCTGGATGCCACCATGGACGTCGCCGCCGTGCACTTTCAGTCGCT
GGACATGTTCGGGCCCCGGGTTGGCTTCATCAAGTTTCGGGCGACGGCAA
CGTGTGGGGGGAAGCCCGTCCCTGGGGTTGTGTTCATGCGTGGTGGCGCG
GTGGCGGTGCTGGTGCTGCTGTCTTGCGGAGACGAGCTGTACACAGTCCT
GTGTCGGCAGCCCCGCATGCCCATCGGCCGGGTGGCCTTCCCGGAGATTC
CGGCGGGCATGCTGGACGGCTCGGGGCACTTTGCGGGCGTGGCTGCGAAG
GAAATGGAGGAGGAAACCGGGCTCAAAATGGCGGCAGAGGACCTCATTGA
CCTTACACAGCTGGCGTACGGCGACGCGTACCCAGGCGTGTACCCAAGGC
GACGGCAACGTGTGGGGGGAAGCCCGTCCCTGGGGTTGTGTTCATGCGTG
GTGGCGCGGTGGCGGTGCTGGTGCTGCTGTCTTGCGGAGACGAGCTGTAC
ACAGTCCTGTGTCGGCAGCCCCGCATGCCCATCGGCCGGGTGGCCTTCCC
GGAGATTCCGGCGGGCATGCTGGACGGCTCGGGGCACTTTGCGGGCGTGG
CTGCGAAGGAAATGGAGGAGGAAACCGGGCTCAAAATGGCGGCAGAGGAC
CTCATTGACCTTACACAGCTGGCGTACGGCGACGCGTACCCAGGCGTGTA
CCCAAGCGTTGGCGGCTGTGACGAGTTCCTCCGCATGTTTCTGTATCGGA
AGGAGGTGTCGCGGGAGGAGATCACGGCGTTGCAGGGCAAGCTGACGGGC
AACCCCGACGAAGCGGAGCACATCGTTCTGCAGGTGGTGCCGTACGCGGA
CATGTGGAAGCTCACGTCTGACGCAAAAACCTTAGCCGCCATGTTCCTGT
ACGAAAAGCTGGCACCAACCCTGCCCCCAAAATGACGTTGGCGGCTGTGA
CGAGTTCCTCCGCATGTTTCTGTATCGGAAGGAGGTGTCGCGGGAGGAGA
TCACGGCGTTGCAGGGCAAGCTGACGGGCAACCCCGACGAAGCGGAGCAC
ATCGTTCTGCAGGTGGTGCCGTACGCGGACATGTGGAAGCTCACGTCTGA
CGCAAAAACCTTAGCCGCCATGTTCCTGTACGAAAAGCTGGCACCAACCC
TGCCCCCAAAATGA
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