mRNA_S-firma_F_contig1074.999.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1074.999.1 vs. uniprot
Match: D8LLF6_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLF6_ECTSI) HSP 1 Score: 1032 bits (2668), Expect = 0.000e+0 Identity = 523/617 (84.76%), Postives = 558/617 (90.44%), Query Frame = 3
Query: 324 APVLADSAV--------PSADRTIAVSSGRQGETPATWAAKAKARAEAALRAARLVWTAVVISADYNAFDLSQTLQRMISFDEVNTAQAEYEMLADEMWKAQEEQKRFGIDAETLPDPQERALARARSKEWHTRVTVAAKKIADAEARGLRPPMSDLHRRSAERLRELCSVNGGVYVKLGQHLSQLDFVLPPEFIEILRCMLDQAPQSAIEDVREVIREELGEYPETLWRSFDPVPIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAVVDRLFPKFSYKWLADEVERNLPQELNFRREASNASRCAAMFEGRSDICVPPIVSEQTAERVLTMGFETGLRATDVEGMRAMGVSLPKVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARKGSGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGEMYHLLAAILCGRSWDAIEDTSSGMDGLHTKDIETEKGMVRGYVQHYASEIAMLLSKVDRQMLLLFKTNDCLRHIDRTLGAPINTFVIAAKTCISVLREEDAKEALARLGASNRNFVVRGLLYALYYIRGVPETLKVNAQLLAMGIQERLLERRAQQLR 2150
APVLAD + P+ D T + + + AKA+ARAEAA+RAARLVWTAV+ISADY AFD+S+ QR SF E NTA EYE LADEMW+AQE+Q+R GI+AETLPDPQ+RALARARSKEWH++VTVAAKKIADAEA GLR PMSDLHRRSAERLR+LCSVNGGVYVKLGQHLSQLDFVLPPEFI++LRCMLDQAPQ+ IEDVREVIREELGEYPETLWR+FDP IASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVA VDRLFPKFSYKWLADEVERNLP+EL+F EASN+ RCAAMFEGRSDICVPP+V EQTAERVLTM FE GLRATDVEGMRAMGVSLP+VASLISEAFCEQMFRHGSVHCDPHGANVLVRPHP AR+GSGRPQLVLLDHGLYRELTE+FRVDHCRLWKAMVFKDIPGVK+YCQRLNSG+MYHLLAAILCGRSWDAIEDT+SGMDGLHTKDIETEKGMVRGYVQ YA EIAMLLSKVDRQMLLLFKTNDCLRHIDRTLGAPINTFVIAAKTCISVLREEDAK ALARLGAS RNFVVRGLL LY++RGVPE LKVNAQLLAM +QERLLERR QQ R
Sbjct: 16 APVLADGSAAAAAAVGPPATDLTARIKNNIEDGGATVVVAKARARAEAAVRAARLVWTAVLISADYKAFDVSKAFQRATSFGEENTAMGEYEALADEMWQAQEQQRRCGIEAETLPDPQQRALARARSKEWHSKVTVAAKKIADAEAAGLRAPMSDLHRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNLPRELDFLHEASNSRRCAAMFEGRSDICVPPVVREQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKKYCQRLNSGDMYHLLAAILCGRSWDAIEDTTSGMDGLHTKDIETEKGMVRGYVQQYAPEIAMLLSKVDRQMLLLFKTNDCLRHIDRTLGAPINTFVIAAKTCISVLREEDAKGALARLGASERNFVVRGLLRLLYFVRGVPEALKVNAQLLAMEVQERLLERRLQQQR 632
BLAST of mRNA_S-firma_F_contig1074.999.1 vs. uniprot
Match: W7TCN3_9STRA (Abc1 protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCN3_9STRA) HSP 1 Score: 444 bits (1142), Expect = 1.510e-139 Identity = 263/557 (47.22%), Postives = 339/557 (60.86%), Query Frame = 3
Query: 438 EAALRAARLVWTAVVISADYNAFDLSQTLQRMISFDEVNTAQAEYEMLA--DEMWKAQEEQKRFGIDAETLPDPQER-----------------------ALARAR------------SKEWHTRVTVAAKKIADAE--ARGLRPPMSDLHRRSAERLRELCSVNGGVYVKLGQHLSQLDFVLPPEFIEILRCMLDQAPQSAIEDVREVIREELGEYPETLWRSFDPVPIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAVVDRLFPKFSYKWLADEVERNLPQELNFRREASNASRCAAMFEG-RSDICVPPIVSEQTAERVLTMGFETGLRATDVEGMRAMGVSLPKVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARKGSGR-PQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGEMYHLLAAILCGRSWDAIEDTSSGMDGLHTKDIETEKGMVRGYVQHYASEIAMLLSKVDRQMLLLFKTNDCLRHIDRTLGAPINTFVIAAKTCISVLREEDAKE 1985
+A LR RL T V+I ADY F T +E +A AE + A +EM AQ + +R + L + ER A AR R +K+ R+ AA +++ E A+G+ +++R A+RL ELC +N G Y+K+GQHLS LD++LP E + L+ +L++AP S+ DVR VI+EELG PE LW SFDP PIASASLAQVH A +G +LAVKVQHRGLRE S+GDV AV V V FP+FSYKW++DE+ LP+EL+F EA NA R A F+ R+D+ VP IV QT RVLTM FE G+ ATDV +R G+ L KVA LIS FCEQ+F G HCDPH ANVL+R KG R P LVLLDHGLY+EL +Q R+D+ LWKA+V KD+PGVK YCQ+LN+G MY LLAAIL RSWD I TS + L T + +K ++R Y Q Y EI +L+ V R+MLLL K NDCLRHIDR LGAP+++ ++ A+ + L E+ K+
Sbjct: 192 QAVLRGLRLGKTVVLIVADYKLFSSGLTGGTWWGKEEQLSAAAETSLRAAEEEMQAAQHDYERLSLAVRRLEEAGEREGGTLGGQARGWRAXXXXXRRGPAAARERERRAAKEALEKSTKQARQRLLTAAARLSRVEEHAKGV-SQKGKVYQRMADRLLELCQLNLGCYIKIGQHLSNLDYLLPREITDTLKVLLNRAPVSSYPDVRAVIKEELGAPPEELWASFDPTPIASASLAQVHLATDASGRKLAVKVQHRGLRELSRGDVAAVSFFVNAVAAAFPEFSYKWISDELAPQLPKELDFVNEALNAERADAFFQRHRTDVVVPEIVWAQTRPRVLTMAFEEGVCATDVPALRERGLPLDKVAHLISSVFCEQVFSSGFAHCDPHPANVLIR---GGHKGDPRAPVLVLLDHGLYKELPDQLRLDYASLWKALVLKDLPGVKYYCQKLNAGRMYSLLAAILTSRSWDDI--TSPDLGSLQTPSSKEDKTLIRSYAQRYYFEIVDILNSVPREMLLLLKMNDCLRHIDRALGAPVDSSLVTAEESVKALLREELKK 742
BLAST of mRNA_S-firma_F_contig1074.999.1 vs. uniprot
Match: A0A7S1DP73_HEMAN (Hypothetical protein (Fragment) n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1DP73_HEMAN) HSP 1 Score: 399 bits (1025), Expect = 1.750e-127 Identity = 206/394 (52.28%), Postives = 268/394 (68.02%), Query Frame = 3
Query: 768 LHRRSAERLRELCSVNGGVYVKLGQHLSQLDFVLPPEFIEILRCMLDQAPQSAIEDVREVIREELGEYPETLWRSFDPVPIASASLAQVHRAE-GWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAVVDRLFPKFSYKWLADEVERNLPQELNFRREASNASRCAAMFEGRSDICVPPIVSEQTAERVLTMGFETGLRATDVEGMRAMGVSLPKVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARKGSGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGEMYHLLAAILCGRSWDAIEDTSSGMDGLHTKDIETEKGMVRGYVQHYASEIAMLLSKVDRQMLLLFKTNDCLRHIDRTLGAPINTFVIAAK 1946
+H+RSAERL +L NGGVYVK+GQHLSQ+D+VLP EF +LR LD AP++ E V EV++EELG PE ++ F+ VPIASASLAQVH A GE++AVKVQHRGLRET+ GDV+AV VV V+ +FP W+ADE+ LP ELNF E N RC MF+ + +P + +RVLTM FE GL + D EG+ +GVS + A+LISE FC QMF H VHCDPH +N+LVR HP+ G G PQLVLLDHGLYREL F +++ RLWKA+VF D+ ++ CQ +G+MY LLA+++ R W+ I D + + G + E +K ++ YV YA++I +++KV RQMLLL K NDCLRH+DR LG+P TFVI A+
Sbjct: 7 VHKRSAERLLDLARANGGVYVKIGQHLSQMDYVLPEEFTTVLRACLDDAPRTEWEGVCEVVQEELGGAPEEVFEQFERVPIASASLAQVHVATLKGTGERVAVKVQHRGLRETAVGDVEAVSFVVRVLSTIFPSMPMWWVADELAPMLPIELNFDNERRNGDRCREMFQEDDRVVIPKFYPNLSTKRVLTMTFEEGLSSADAEGITGLGVSPERTAALISEVFCSQMFLHRFVHCDPHPSNLLVRRHPS---GGGSPQLVLLDHGLYRELDPDFVLEYSRLWKALVFGDVQAIRRQCQVFGAGDMYPLLASMIMARPWNDILDRQA-LTGQ--SEGEEDKDKIKLYVVKYAADIGAMMNKVPRQMLLLLKANDCLRHVDRRLGSPTTTFVITAR 394
BLAST of mRNA_S-firma_F_contig1074.999.1 vs. uniprot
Match: A0A6H5KV11_9PHAE (ABC1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV11_9PHAE) HSP 1 Score: 390 bits (1001), Expect = 1.300e-126 Identity = 194/223 (87.00%), Postives = 209/223 (93.72%), Query Frame = 3
Query: 591 MWKAQEEQKRFGIDAETLPDPQERALARARSKEWHTRVTVAAKKIADAEARGLRPPMSDLHRRSAERLRELCSVNGGVYVKLGQHLSQLDFVLPPEFIEILRCMLDQAPQSAIEDVREVIREELGEYPETLWRSFDPVPIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAVVDRLFPKFSYKWLADEVERNLPQELNFRREASNASRCA 1259
M + +E+Q+R GI+AETLPDPQERALARARSKEWH +V VAAKKIADAEA GLR PMSDLHRRSAERLR+LCSVNGGVYVKLGQHLSQLDFVLPPEFI++LRCMLDQAPQ+ IEDVREVIREELGEYPETLWR+FDP IASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVA VDRLFPKFSYKWLADEVERNLP+EL+F EASN+ RC+
Sbjct: 1 MGEYEEQQRRCGIEAETLPDPQERALARARSKEWHAKVAVAAKKIADAEAAGLRAPMSDLHRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNLPRELDFLHEASNSRRCS 223
BLAST of mRNA_S-firma_F_contig1074.999.1 vs. uniprot
Match: A0A7S1YTP5_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YTP5_TRICV) HSP 1 Score: 390 bits (1003), Expect = 9.240e-124 Identity = 209/419 (49.88%), Postives = 275/419 (65.63%), Query Frame = 3
Query: 762 SDLHRRSAERLRELCSVNGGVYVKLGQHLSQLDFVLPPEFIEILRCMLDQAPQSAIEDVREVIREELGEYPETLWRSFDPVPIASASLAQVHRAEGWN--GEQLAVKVQHRGLRETSKGDVDAVCLVVAVVDRLFP-KFSYKWLADEVERNLPQELNFRREASNASRCAAMFEG-------RSD-ICVPPIVSEQTAERVLTMGFETGLRATDVEGMRAMGVSLPKVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARKGSGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGEMYHLLAAILCGRSWDAIEDTSS--GMDGLHTKDIETEKGMVRGYVQHYASEIAMLLSKVDRQMLLLFKTNDCLRHIDRTLGAPINTFVIAAKTCISVLREEDA 1979
S HRR+A +L LC NGGVYVK+GQHL+ LD+++P E+IE L + D AP +A EDVREVIREELG YPE L+ SFDP+PIASASLAQVH A G +LAVKVQHRGLRETS+GD+ A+ L V +++RLFP +F + W+ DE+ NLP ELNFR E +N+ A R D + VP + ++T+ERVLTM FE G +ATD+ +R G+ V+ L+S AF Q+FR G VHCDPH ANVL+R A G PQ+VL+DHGLYR + ++FRV + RLWK+++ D+ G+K+ C+ L EMY LLAA+L R +D I + S + K E +K M++GY Q + ++I +L V RQMLLLFK NDCLRHI+ LGA ++ A C + EDA
Sbjct: 15 SRTHRRAAHKLLTLCRANGGVYVKVGQHLANLDYLIPEEYIEALSKLFDDAPVTAYEDVREVIREELGSYPEALFSSFDPIPIASASLAQVHVATSKKDAGRKLAVKVQHRGLRETSRGDIVALTLAVRILERLFPDEFGWGWICDEIAPNLPVELNFRNEGTNSEIAAGHMRDHLRESGMREDAVVVPKVHWDETSERVLTMDFEEGFKATDLNSLRKSGLDTGDVSRLVSTAFHSQVFRSGFVHCDPHPANVLLR----ANAEDGTPQMVLVDHGLYRRIDDEFRVRYARLWKSLLVADVGGIKDSCRDLGVDEMYPLLAAMLTSRPFDEIIERSKTGALKTDSNKTSEADKAMIKGYAQRFITDIIKMLDAVPRQMLLLFKMNDCLRHIETALGASHGDGLMVAGRCAARTVYEDA 429
BLAST of mRNA_S-firma_F_contig1074.999.1 vs. uniprot
Match: A0A8J2S8Y1_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8Y1_9STRA) HSP 1 Score: 386 bits (991), Expect = 5.880e-120 Identity = 225/520 (43.27%), Postives = 304/520 (58.46%), Query Frame = 3
Query: 429 ARAEAALRAARLVWTAVVISADYNAFDLSQTLQRMISFDEVNTAQAEYEMLADEMWKAQEEQKRFGIDAETLPDPQERALARARSKEWHTRVTVAAKKIADAEARG-LRPPMSDLHRRSAERLRELCSVNGGVYVKLGQHLSQLDFVLPPEFIEILRCMLDQAPQSAIEDVREVIREELGEYPETLWRSFDPVPIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAVVDRLFPKFSYKWLADEVERNLPQELNFRREASNASRCAAMFEGRSDICVPPIVSEQTAERVLTMGFETGLRATDVEGMR-AMGVSLPKVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARKGSGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGEMYHLLAAILCGRSWDAIEDTSSGMDGLHTKDIETEKGMVRGYVQHYASEIAMLLSKVDRQMLLLFKTNDCLRHIDRTLGAPINTFVIAAKTCISVLREEDAK 1982
A+AEA RAARL T V++ADY + +E A A ++ + KA EQ+ G++ E D R R+ + +A A+G P + H R+A RL L NGGVYVK+ QH +QLD++LPPE+ LD A +S+ +DVR V++EELG P+ + +F+ PIASASLAQVHRA W G +AVKVQHRGLRETS GD+ V V +LFP F +W+ DE+ +LP+EL+F EA+N RCA FE D+ VP + E T+ RVLTM +E G+ T + +R +G+ VA+L+S AF F G VHCDPH ANVLVR PA GRPQLVLLDHGLYREL ++FR++ RLW+A+ D+PG++E + L G++Y L AA+L R WD + + +D L + M+R Y Q YA EI ++L +V RQ+LLL K +DCLRH+DR+LG NT V+ A C L D +
Sbjct: 42 AQAEAVGRAARLAGTLAVVAADYKGVEWFS--------NETKDASA-----SERLKKAMAEQELSGLEVERAKDAAAREAGVRRAXXXXXXXXXXSAAVA---AQGSATTPWNAAHERNAARLLHLARANGGVYVKIAQHCAQLDYLLPPEYTTAFASCLDDAARSSWDDVRAVVKEELGAEPDEAFDAFEREPIASASLAQVHRAV-WKGRDVAVKVQHRGLRETSVGDLALCGAAVGVFGKLFPAFRMQWVVDEIAPHLPRELDFVAEAANCRRCAKTFERWPDVVVPEVFDEATSARVLTMSWEPGVNGTRKDEIRDELGLDPTAVAALVSTAFAFLTFHDGHVHCDPHAANVLVRASPA-----GRPQLVLLDHGLYRELDDEFRLEWARLWRALALADVPGIRESAEALGVGDLYPLFAAMLTQRPWDDV--VNPDLDSLRRTGA-ADDAMLREYAQRYAQEITVVLDRVPRQLLLLLKMSDCLRHLDRSLGGTTNTDVVTAHACADALYAADGR 536
BLAST of mRNA_S-firma_F_contig1074.999.1 vs. uniprot
Match: A0A383WHM2_TETOB (ABC1 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WHM2_TETOB) HSP 1 Score: 385 bits (990), Expect = 1.680e-119 Identity = 198/428 (46.26%), Postives = 279/428 (65.19%), Query Frame = 3
Query: 723 IADAEARGLRPPMSDLHRRSAERLRELCSVNGGVYVKLGQHLSQLDFVLPPEFIEILRC-MLDQAPQSAIEDVREVIREELGEYPETLWRSFDPVPIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAVVDRLFPKFSYKWLADEVERNLPQELNFRREASNASRCAA-MFEGRSDIC----VPPIVSEQTAERVLTMGFETGLRATDVEGMRAMGVSLPKVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARKGSGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGEMYHLLAAILCGRSWDAIEDTSSGMDGLHTKDIETEKGMVRGYVQHYASEIAMLLSKVDRQMLLLFKTNDCLRHIDRTLGAPINTFVIAAKTCISVLREEDAKEA 1988
+ + + L + H+RSA++L +LC NGG+Y+KLGQH+ QLD +LP E++ +R MLD+ P SA +V ++IRE+LG+ PE L++ F PIASASLAQVH A +G +LAVKVQH GLRE+ DV + +V V +FP F+Y WL DE++ NLP EL+F E +NA RC + +S + VP + + T+ RVLTM F G++ TD G+ +G++ +A L+S+ F E +F HG VHCDPH AN+LVR PA G+PQLVLLDHGLYR++ + FR ++ LW+A++F D G+K++ + +N+G+ Y L AA+L R WD I D ++ L + EK M+RGY YA +I LL ++ R +LLL KTNDCLR +D +LGAPINTFVI AKTC L E D +++
Sbjct: 98 VPEGDEAALHDALHACHQRSADKLLKLCFDNGGIYIKLGQHIGQLDHLLPEEYVVTMRQHMLDKCPVSAWPEVAQIIREDLGQPPEVLFKEFSTTPIASASLAQVHVATAHDGSKLAVKVQHAGLRESCAADVTTIEFLVNAVRVVFPDFNYMWLVDEIKHNLPLELDFNHEIANAERCRRNLASPKSSVAKSVHVPAVYPQLTSARVLTMEFIEGVQVTDRPGLARLGIAPGALAQLVSQTFNEMIFIHGDVHCDPHAANLLVRRGPA-----GQPQLVLLDHGLYRQIDDGFRREYAALWRALIFSDKAGIKQHAESMNAGDAYPLFAAMLTMRPWDQIVDFDPQLEHLSLTSNKQEKDMLRGYAAIYAKQIGDLLLRMPRPLLLLLKTNDCLRSVDLSLGAPINTFVITAKTCNRALAEMDMQQS 520
BLAST of mRNA_S-firma_F_contig1074.999.1 vs. uniprot
Match: A0A7S3V6U3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6U3_9STRA) HSP 1 Score: 376 bits (965), Expect = 1.150e-115 Identity = 222/534 (41.57%), Postives = 304/534 (56.93%), Query Frame = 3
Query: 438 EAALRAARLVWTAVVISADYNAFDLSQTLQRMISFDEVNT---------AQAEYEMLADEMWKAQ-------------EEQKRFGIDAETLPDPQERALARARSKEWHTRVTVAAKKIADAEARGLRPPMSDLHRRSAERLRELCSVNGGVYVKLGQHLSQLDFVLPPEFIEILRCMLDQAPQSAIEDVREVIREELGEYPETLWRSFDPVPIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAVVDRLFPKFSYKWLADEVERNLPQELNFRREASNASRCAAMFEGRSDICVPPIVS-EQTAERVLTMGFETGLRATDVEGMRAMGVSLPKVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARKGSGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGEMYHLLAAILCGRSWDAI--EDTSSGMDGLHTKDIETEKGMVRGYVQHYASEIAMLLSKVDRQMLLLFKTNDCLRHIDRTLGAPINTFVIAAKTCISVL 1964
EA+ RA RLV T +I +Y + ++ + +++ + + + E + A+E+ KAQ E +K+ ++A E ALA EW V H R+A+ LR LC NGG Y+K+GQHL+ LD +LPP +I+IL + AP + IEDVREVI+EELG YPE ++ F PIASASLAQVH A +G++LAVKVQHRGLRETSKGD+ A+ V+ +VD +F F + W+ +E+ NLP+EL+F E NA A E CV P V +QT+ RVL M FE G T +E ++ GV ++A+LIS F Q+F+ G VHCDPH NV R G+PQLVL DHGLY++L + FR+ + +LWK+++ DI G+KE C L EMY LLAA+L R +D + + + + D+ ++ M+RGY Q Y EI +L KV RQMLLLFK NDCLRHID +LG+P NT +IA K L
Sbjct: 75 EASSRALRLVQTVTMIIVEYKTEEYTEKMNALLNEVGIKSNHPSSTRVLLEKEITIRAEELDKAQKIHTNNDISDGGYEVRKKAVLEAAERLGLAENALAEIDENEWENSV----------------------HARAAKMLRSLCRKNGGTYIKVGQHLANLDHLLPPAYIKILYSLFGDAPVTPIEDVREVIKEELGAYPEDIFEEFAIEPIASASLAQVHVAMK-DGKKLAVKVQHRGLRETSKGDIIALETVIGIVDSMFNDFKWGWICEEIAPNLPRELDFVFEGKNAEAAAKHIERTGLDCVIPKVHWDQTSSRVLVMDFEEGHSVTKLEEIKKSGVKKSELATLISSVFQSQIFQSGFVHCDPHPENVYWR-----MSEKGKPQLVLFDHGLYKQLDDDFRMTYAQLWKSLLIADIEGIKESCSSLGVEEMYPLLAAMLTSRPFDEVIEREKTKAFTSKESLDVTSDAAMIRGYAQQYLKEIIQMLDKVPRQMLLLFKMNDCLRHIDHSLGSPANTLIIAGKYATETL 580
BLAST of mRNA_S-firma_F_contig1074.999.1 vs. uniprot
Match: A9V7H6_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V7H6_MONBE) HSP 1 Score: 370 bits (949), Expect = 3.730e-115 Identity = 185/388 (47.68%), Postives = 259/388 (66.75%), Query Frame = 3
Query: 759 MSDLHRRSAERLRELCSVNGGVYVKLGQHLSQLDFVLPPEFIEILRCMLDQAPQSAIEDVREVIREELGEYPETLWRSFDPVPIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAVVDRLFPKFSYKWLADEVERNLPQELNFRREASNASRCAAMFEGRSDICVPPIVSEQTAERVLTMGFETGLRATDVEGMRAMGVSLPKVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARKGSGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGEMYHLLAAILCGRSWDAIEDTSSGMDGLHTKDIETEKGMVRGYVQHYASEIAMLLSKVDRQMLLLFKTNDCLRHIDRTLGAPI 1922
M++ H ++A LR+L NGG+Y+KLGQHL LD+++P ++++ ++ D+AP S+ EDVR V++E+LG ETL+ SFD P+ASASLAQVHRA +G ++AVKVQH GLRE S GD+ V ++V + R+FP F+Y WL +E+++NLP+ELNF EA+NA RCAAM R D+ +P IV + T+ RVLTM F G+ TDV +RA V + ++ ++E F EQ+F HG VHCDPH NVLV+ G GR ++VLLDHGLYREL E FR+++CRLW+A++ D G++ + +N+GE Y L AA+L + WDA+ G D L EK VR V Y +I LL++V R +LLL KTNDCL ++ L A +
Sbjct: 73 MANCHEQAAAILRQLFETNGGIYIKLGQHLGLLDYIIPEQYVKAMQVFFDRAPTSSYEDVRRVVQEDLGADIETLFSSFDFAPLASASLAQVHRAVLRDGREVAVKVQHWGLREDSVGDIYTVAVLVELTKRIFPDFNYTWLVEEIQKNLPRELNFVEEAANARRCAAMHADRHDVHIPEIVEDMTSSRVLTMEFCHGIPLTDVASIRAAKVDIAAISRTVTEMFSEQIFVHGRVHCDPHPGNVLVQA-----DGHGRARIVLLDHGLYRELPETFRLEYCRLWRAIIEGDAAGIERHATTMNAGEYYPLFAAMLTYKPWDAV--VGRGSDRLELSGSAREKAEVRRNVGKYLRQINALLARVPRDLLLLLKTNDCLHGLENNLRAAL 453
BLAST of mRNA_S-firma_F_contig1074.999.1 vs. uniprot
Match: A0A448ZAJ0_9STRA (ABC1 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZAJ0_9STRA) HSP 1 Score: 374 bits (960), Expect = 1.070e-114 Identity = 228/566 (40.28%), Postives = 333/566 (58.83%), Query Frame = 3
Query: 435 AEAALRAARLVWTAVVISADYNAFDLSQTLQRMISFDEVNTAQAEYEMLADEMWKAQEEQKRFGID---------AETLPDPQERALARARSKEWHTRVTVAAKKIADAEARGL-RPPMSD---LHRRSAERLRELCSVNGGVYVKLGQHLSQLDFVLPPEFIEILRCMLDQAPQSAIEDVREVIREELGEYPETLWRSFDPVPIASASLAQVHRAE-GWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAVVDRLFPKFSYKWLADEVERNLPQELNFRREASNASRCAA-MFEGRSDICVPPIVSEQTAERVLTMGFETGLRATDVEGMRAMGVSLPKVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPAARKGSGRPQLVLLDHGLYRELTEQFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGEMYHLLAAILCGRSWDAI-EDTSSGM-------DGLHTKDIETEKGMVRGYVQHYASEIAMLLSKVDRQMLLLFKTNDCLRHIDRTLGAPINTFVIAAKTCISVLREEDAKEALARLGASNRNFVV--RGLLYALYYI 2057
AEA+LRA RL+ TA I DY ++ + F +N + E + L E+ + + + + I+ A +ER + + K T++ AA ++A E + + R +S L+R+SAERL LC NGGVY+K+GQHL+ LD+++P E+IE+L + + APQS I DV VI E+LG E L+ FDP+PIASASLAQVH A ++LAVKVQHRGLRETS GD+ AV VV +D LF F++ W+ADE+ LP+EL+F+RE N+ + AA + + C+P +V E+T+ RVLTM FE G ++TD+E ++ G++ VA L+S F Q+F G VHCDPH N L+R R +GRP++VL+DHGLY+ L + FR+ + LW++++ D+ G+K C + +MY L AA+L R +D I E + +G H + ++ ++RGY + + EI LL + QMLLL K NDCLRHID TL +P NT VIA K S + +E + R +SN F + R +L Y++
Sbjct: 64 AEASLRAMRLISTAFRIILDYQV----AKVETHMPFSSLNKEECEIKELEAEIERRELKLEELQIEYSRGTGSNEATRKLSVEERIELQNKQK---TQIQEAAAELAAVEEKWMTREDLSSKSRLNRKSAERLLNLCRENGGVYIKVGQHLANLDYLIPREYIEVLSSLFNDAPQSDINDVYSVIEEDLGHKAEDLFDDFDPIPIASASLAQVHVAYCKKTKKKLAVKVQHRGLRETSAGDLFAVTRVVRAIDSLFTDFTFGWIADEMAPLLPKELDFQREGRNSEQAAADVRKSGLACCIPKVVWERTSPRVLTMEFEEGFKSTDIEALKDSGLNKSDVAKLVSSVFNSQVFHSGFVHCDPHPGNCLIR-----RSKNGRPEMVLVDHGLYKRLDDDFRIKYAELWRSLMMADLEGIKSACSGMGVNKMYPLFAAMLTARPYDEIIERSKTGSLSARTHGGSSHEVGSQADRAVIRGYAKQFLGEIFSLLGVLPPQMLLLLKMNDCLRHIDMTLESPTNTLVIAGKYAASAVY----REQMRRTSSSNNEFSLAKRSILRFRYWL 613 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1074.999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1074.999.1 >prot_S-firma_F_contig1074.999.1 ID=prot_S-firma_F_contig1074.999.1|Name=mRNA_S-firma_F_contig1074.999.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=697bp MSRAVLLSASAATARRRSLLSRNQLRRLPSQHSRSIHHHTKADDAPAWDSback to top mRNA from alignment at S-firma_F_contig1074:2..8195- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1074.999.1 ID=mRNA_S-firma_F_contig1074.999.1|Name=mRNA_S-firma_F_contig1074.999.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=8194bp|location=Sequence derived from alignment at S-firma_F_contig1074:2..8195- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1074:2..8195- >mRNA_S-firma_F_contig1074.999.1 ID=mRNA_S-firma_F_contig1074.999.1|Name=mRNA_S-firma_F_contig1074.999.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=4182bp|location=Sequence derived from alignment at S-firma_F_contig1074:2..8195- (Sphaerotrichia firma ET2_F female)back to top |