prot_S-firma_F_contig10721.978.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10721.978.1
Unique Nameprot_S-firma_F_contig10721.978.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length138
Homology
BLAST of mRNA_S-firma_F_contig10721.978.1 vs. uniprot
Match: A0A7S1GE63_9STRA (Trafficking protein particle complex subunit n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GE63_9STRA)

HSP 1 Score: 173 bits (438), Expect = 3.080e-52
Identity = 84/127 (66.14%), Postives = 107/127 (84.25%), Query Frame = 0
Query:    1 MSLFTLYIVNRAGGLVYNRDLAPGVPRLAANDYLRNASMFHSLYAIASQLAPVPSVGIETLEADSFTLECFQSPTGIKFFVTARLGSSGLQEFLRTVYQLFADYVLKNPFYETDMPIRVEKFDAAVD 127
            M+L+TLYIVN+AGGL+YN+DL+  VP+L  N+YL  AS FH L+AI+SQLAPV + GIE LEAD+FTL C+Q+PTGIKFFVTAR G++GL+  L+TVY L+AD+VLKNPFYE DMPIR + FD A++
Sbjct:   72 MALYTLYIVNKAGGLIYNKDLST-VPKLTGNEYLTLASTFHGLHAISSQLAPVVAGGIELLEADTFTLRCYQTPTGIKFFVTARPGTAGLEVVLKTVYGLYADFVLKNPFYELDMPIRCDLFDRALE 197          
BLAST of mRNA_S-firma_F_contig10721.978.1 vs. uniprot
Match: A0A2D4CAE8_PYTIN (Trafficking protein particle complex subunit n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CAE8_PYTIN)

HSP 1 Score: 157 bits (396), Expect = 1.120e-46
Identity = 73/124 (58.87%), Postives = 96/124 (77.42%), Query Frame = 0
Query:    3 LFTLYIVNRAGGLVYNRDLAPGVPRLAANDYLRNASMFHSLYAIASQLAPVPSVGIETLEADSFTLECFQSPTGIKFFVTARLGSSGLQEFLRTVYQLFADYVLKNPFYETDMPIRVEKFDAAV 126
            L +LYI+N++GGL+Y  DL+   PRL++ND+LR  S FHS++AIA   APV S GIE+LE D+F L+CFQ+PTGIKFF+TA LG+  L   LRT+Y+L+ DYVLKNPFYE +MPIR   F+A +
Sbjct:    2 LHSLYIINKSGGLIYQLDLSSAAPRLSSNDHLRLGSTFHSMHAIAVLAAPVASGGIESLETDTFRLQCFQTPTGIKFFITAALGTPDLDHALRTIYELYVDYVLKNPFYELEMPIRCSLFNAGL 125          
BLAST of mRNA_S-firma_F_contig10721.978.1 vs. uniprot
Match: K3WRL1_GLOUD (Trafficking protein particle complex subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRL1_GLOUD)

HSP 1 Score: 155 bits (392), Expect = 4.540e-46
Identity = 72/124 (58.06%), Postives = 97/124 (78.23%), Query Frame = 0
Query:    3 LFTLYIVNRAGGLVYNRDLAPGVPRLAANDYLRNASMFHSLYAIASQLAPVPSVGIETLEADSFTLECFQSPTGIKFFVTARLGSSGLQEFLRTVYQLFADYVLKNPFYETDMPIRVEKFDAAV 126
            L +LYI+N++GGLVY +DL+   P+L++ND+LR  S FHS++AIA   +PV S GIETLE D+F L+CFQ+PTG+KFF+TA LG+  L   LRTVY+L+ DYVLKNPFYE +MPIR   F++ +
Sbjct:    2 LHSLYIINKSGGLVYQQDLSSAAPKLSSNDHLRLGSTFHSMHAIAVLASPVASGGIETLETDTFRLQCFQTPTGLKFFLTAALGTPDLDAVLRTVYELYVDYVLKNPFYELEMPIRCSLFNSGL 125          
BLAST of mRNA_S-firma_F_contig10721.978.1 vs. uniprot
Match: F0WDB3_9STRA (Trafficking protein particle complex subunit n=3 Tax=Albugo TaxID=65356 RepID=F0WDB3_9STRA)

HSP 1 Score: 153 bits (386), Expect = 3.480e-45
Identity = 69/124 (55.65%), Postives = 97/124 (78.23%), Query Frame = 0
Query:    3 LFTLYIVNRAGGLVYNRDLAPGVPRLAANDYLRNASMFHSLYAIASQLAPVPSVGIETLEADSFTLECFQSPTGIKFFVTARLGSSGLQEFLRTVYQLFADYVLKNPFYETDMPIRVEKFDAAV 126
            L  LYI+N++GGL+Y +DL+P  P+L++ND+LR  S FHS++AIA+  APV S GI +LE D+F L+CFQ+ TGIKFF+TA+LG+  +   L+T+Y+L+ DYVLKNPFYE +MPIR   F+A +
Sbjct:    2 LHALYIINKSGGLIYQQDLSPAAPKLSSNDHLRLGSTFHSMHAIAALAAPVASGGINSLETDTFRLQCFQTLTGIKFFITAQLGTLDIDNALKTIYELYVDYVLKNPFYELEMPIRCTLFNAGL 125          
BLAST of mRNA_S-firma_F_contig10721.978.1 vs. uniprot
Match: A0A7S2RJT7_9STRA (Trafficking protein particle complex subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJT7_9STRA)

HSP 1 Score: 152 bits (385), Expect = 5.770e-45
Identity = 74/127 (58.27%), Postives = 93/127 (73.23%), Query Frame = 0
Query:    6 LYIVNRAGGLVYNRDLAPGVPRLAANDYLRNASMFHSLYAIASQLAPVPSVGIETLEADSFTLECFQSPTGIKFFVTARLGSSGLQEFLRTVYQLFADYVLKNPFYETDMPIRVEKFDAAVDRLAAS 132
            L+I++R+GGL++N+DL+   PRL AND+LR  S FH  +AIASQ+APV S GIE LE DSF L CFQ PTGIKF +TA  G+  L+  L+ VYQ + DYVLKNPFYE +MPIR E F  A+ R+  S
Sbjct:    5 LFIISRSGGLIFNQDLSELAPRLNANDWLRLGSTFHGFHAIASQIAPVVSSGIEKLETDSFVLRCFQPPTGIKFVITAEAGTQDLEVVLQRVYQAYTDYVLKNPFYELEMPIRCELFTEAIARVIQS 131          
BLAST of mRNA_S-firma_F_contig10721.978.1 vs. uniprot
Match: H3GHR7_PHYRM (Trafficking protein particle complex subunit n=18 Tax=Peronosporaceae TaxID=4777 RepID=H3GHR7_PHYRM)

HSP 1 Score: 152 bits (383), Expect = 1.200e-44
Identity = 69/121 (57.02%), Postives = 95/121 (78.51%), Query Frame = 0
Query:    3 LFTLYIVNRAGGLVYNRDLAPGVPRLAANDYLRNASMFHSLYAIASQLAPVPSVGIETLEADSFTLECFQSPTGIKFFVTARLGSSGLQEFLRTVYQLFADYVLKNPFYETDMPIRVEKFD 123
            L +LYI+N+AGGL+Y +DL+P  P+L++ND+LR  S FHS++AIA+  AP  S GI++LE  +F L+C Q+PTG+KFF+TA LGS+ L   L+TVY+L+ DYVLKNPFYE +MPIR   F+
Sbjct:    2 LHSLYIINKAGGLIYQQDLSPAAPKLSSNDHLRLGSTFHSMHAIAALAAPTSSGGIDSLETGTFRLQCLQTPTGLKFFITAALGSTDLDVALQTVYELYVDYVLKNPFYELEMPIRCSLFN 122          
BLAST of mRNA_S-firma_F_contig10721.978.1 vs. uniprot
Match: M4BAF1_HYAAE (Trafficking protein particle complex subunit n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BAF1_HYAAE)

HSP 1 Score: 147 bits (370), Expect = 1.200e-42
Identity = 67/121 (55.37%), Postives = 93/121 (76.86%), Query Frame = 0
Query:    3 LFTLYIVNRAGGLVYNRDLAPGVPRLAANDYLRNASMFHSLYAIASQLAPVPSVGIETLEADSFTLECFQSPTGIKFFVTARLGSSGLQEFLRTVYQLFADYVLKNPFYETDMPIRVEKFD 123
            L +LYI+N+AGGL+Y +DL+P  P+L++ND+LR  S FHS++AIA+  AP  S GI++LE  +F L+C Q+PTG KFF+TA LG+  +   L+TVY+L+ DYVLKNPFYE +MPIR   F+
Sbjct:    2 LHSLYIINKAGGLIYQQDLSPAAPKLSSNDHLRLGSTFHSMHAIAALAAPTNSGGIDSLETGTFRLQCLQTPTGTKFFLTAALGTPSVDVTLQTVYELYVDYVLKNPFYELEMPIRCSLFN 122          
BLAST of mRNA_S-firma_F_contig10721.978.1 vs. uniprot
Match: D7FQ99_ECTSI (Trafficking protein particle complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ99_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 3.420e-42
Identity = 68/124 (54.84%), Postives = 94/124 (75.81%), Query Frame = 0
Query:    6 LYIVNRAGGLVYNRDLAPGVPRLAANDYLRNASMFHSLYAIASQLAPVPSVGIETLEADSFTLECFQSPTGIKFFVTARLGSSGLQEFLRTVYQLFADYVLKNPFYETDMPIRVEKFDAAVDRL 129
            L++VN++GGL+YN++L+   PRL +ND+LR  S FHSL+AIA+Q+APVPS GIE LE D+F L+ FQ+ TG+KF +TA  G+  L   L+ +Y+L+ DYVLKNPFYE +MPIR E F   ++ L
Sbjct:    5 LFVVNKSGGLIYNQNLSSAAPRLNSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGGVLQEIYELYTDYVLKNPFYELEMPIRCELFTLYLEEL 128          
BLAST of mRNA_S-firma_F_contig10721.978.1 vs. uniprot
Match: K8Z5G7_NANGC (Trafficking protein particle complex subunit (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z5G7_NANGC)

HSP 1 Score: 144 bits (363), Expect = 1.120e-41
Identity = 66/124 (53.23%), Postives = 91/124 (73.39%), Query Frame = 0
Query:    6 LYIVNRAGGLVYNRDLAPGVPRLAANDYLRNASMFHSLYAIASQLAPVPSVGIETLEADSFTLECFQSPTGIKFFVTARLGSSGLQEFLRTVYQLFADYVLKNPFYETDMPIRVEKFDAAVDRL 129
            L++++R+GGL+YN+DL+   PRL  N++L   S FH L++IA+Q+AP+ S GIE LE D+  L+CFQS TG+KF +TA  G+  L   L  +Y+L+ADYVLKNPFYE DMPIR + F   V+RL
Sbjct:    8 LFVISRSGGLIYNKDLSSSAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRTGVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCDLFQQGVERL 131          
BLAST of mRNA_S-firma_F_contig10721.978.1 vs. uniprot
Match: L1I8E0_GUITC (Trafficking protein particle complex subunit n=2 Tax=Guillardia theta TaxID=55529 RepID=L1I8E0_GUITC)

HSP 1 Score: 142 bits (359), Expect = 3.340e-41
Identity = 71/130 (54.62%), Postives = 91/130 (70.00%), Query Frame = 0
Query:    5 TLYIVNRAGGLVYNRDLAPGVPRLAANDYLRNASMFHSLYAIASQLAPV-PSVGIETLEADSFTLECFQSPTGIKFFVTARLGSSGLQEFLRTVYQLFADYVLKNPFYETDMPIRVEKFDAAVDRLAASR 133
            TL+I+N+AGGL+Y R  +  +  L  ND LR AS FHS++AIA +L PV P  GIETLEADSF LEC+QSPTGIKF + A      L   L+ +Y +F+DYVLKNPFYE DMP++ + F+  VD L  S+
Sbjct:    7 TLFIINKAGGLIYTRHFSQDIAPLNVNDCLRLASTFHSMHAIAGRLTPVGPPTGIETLEADSFRLECYQSPTGIKFLMLAEPKVVALDALLKQIYIIFSDYVLKNPFYELDMPVQCDLFNIKVDALVQSK 136          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10721.978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1GE63_9STRA3.080e-5266.14Trafficking protein particle complex subunit n=1 T... [more]
A0A2D4CAE8_PYTIN1.120e-4658.87Trafficking protein particle complex subunit n=2 T... [more]
K3WRL1_GLOUD4.540e-4658.06Trafficking protein particle complex subunit n=1 T... [more]
F0WDB3_9STRA3.480e-4555.65Trafficking protein particle complex subunit n=3 T... [more]
A0A7S2RJT7_9STRA5.770e-4558.27Trafficking protein particle complex subunit n=1 T... [more]
H3GHR7_PHYRM1.200e-4457.02Trafficking protein particle complex subunit n=18 ... [more]
M4BAF1_HYAAE1.200e-4255.37Trafficking protein particle complex subunit n=1 T... [more]
D7FQ99_ECTSI3.420e-4254.84Trafficking protein particle complex subunit n=2 T... [more]
K8Z5G7_NANGC1.120e-4153.23Trafficking protein particle complex subunit (Frag... [more]
L1I8E0_GUITC3.340e-4154.62Trafficking protein particle complex subunit n=2 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007233Trafficking protein particle complex subunitSMARTSM01399Sybindin_2coord: 3..133
e-value: 9.5E-56
score: 201.2
IPR007233Trafficking protein particle complex subunitPFAMPF04099Sybindincoord: 4..130
e-value: 5.8E-41
score: 139.8
IPR007233Trafficking protein particle complex subunitPANTHERPTHR23249SYNBINDINcoord: 2..133
NoneNo IPR availableGENE3D3.30.450.70coord: 1..133
e-value: 9.0E-48
score: 164.3
NoneNo IPR availablePANTHERPTHR23249:SF15TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 4coord: 2..133
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 1..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10721contigS-firma_F_contig10721:1516..2366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10721.978.1mRNA_S-firma_F_contig10721.978.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10721 1516..2366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10721.978.1 ID=prot_S-firma_F_contig10721.978.1|Name=mRNA_S-firma_F_contig10721.978.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=138bp
MSLFTLYIVNRAGGLVYNRDLAPGVPRLAANDYLRNASMFHSLYAIASQL
APVPSVGIETLEADSFTLECFQSPTGIKFFVTARLGSSGLQEFLRTVYQL
FADYVLKNPFYETDMPIRVEKFDAAVDRLAASRDVSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011012Longin-like_dom_sf
IPR007233TRAPPC