mRNA_S-firma_F_contig10700.954.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10700.954.1 vs. uniprot
Match: A0A4Y7JPS9_PAPSO (Uncharacterized protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7JPS9_PAPSO) HSP 1 Score: 134 bits (338), Expect = 7.020e-34 Identity = 76/208 (36.54%), Postives = 124/208 (59.62%), Query Frame = 1
Query: 1 VQVTRVSAGVAHGVVLTATGEAWSFGSGKDGQLGLGDVEDRSSPQFVRSLYGKRVLAVAAGGWHTVFTTNAGT-YATGDNRFGQLGLGHTESRMLPALVVATREEVMVEAAAGAYHTLTLTAAGCVWACGSNKYRQLGIAECVEPFVDTPHPLLAFRSVEPAQIACGTAHSLFVTAGGDLWTWGRGDAGQLGHGDTNHVDEPKLVKSL 621
+ V V+AG H +T GE + +G G+ G LGLGD DR PQ V ++YG++++ VA G HT+ +G+ Y G +++GQLG G E +++P + A R +V+ + + G HT+ LT+ G ++ G NK+ Q+G+ + V+ V + V QI+CG H+L VT ++++WGRG GQLGHG+ + PK++++L
Sbjct: 171 ISVKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSAVYGQKMVLVACGWRHTISVCASGSLYTYGWSKYGQLGHGDCEDQLIPHQLQALRNDVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCVPVQVKFPIEQKV--VQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGENIDRNTPKIIEAL 376
BLAST of mRNA_S-firma_F_contig10700.954.1 vs. uniprot
Match: A0A0S3RFR2_PHAAN (Uncharacterized protein n=7 Tax=Phaseoleae TaxID=163735 RepID=A0A0S3RFR2_PHAAN) HSP 1 Score: 133 bits (335), Expect = 2.080e-33 Identity = 74/212 (34.91%), Postives = 125/212 (58.96%), Query Frame = 1
Query: 1 VQVTRVSAGVAHGVVLTATGEAWSFGSGKDGQLGLGDVEDRSSPQFVRSLYGKRVLAVAAGGWHTV-FTTNAGTYATGDNRFGQLGLGHTESRMLPALVVATREEVMVEAAAGAYHTLTLTAAGCVWACGSNKYRQLGIAE----CVEPFVDTPHPLLAFRSVEPAQIACGTAHSLFVTAGGDLWTWGRGDAGQLGHGDTNHVDEPKLVKSL 621
+ + V+AG H V +T GE + +G G+ G LGLGD DR P+ V S+ +++ VA G HT+ +++ G Y G +++GQLG G+ E ++P + A +E++ + + G H++ LT+ G ++ G NK+ Q+G+ + C V PH + + QI+CG H++ VT ++++WGRG GQLGHGDT + PK++++L
Sbjct: 171 IPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSIDCDKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGNFEDSLVPHKLQALSDELICQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVDDNVDRCSPVQVKFPHDQVLETKI--VQISCGWRHTIAVTDKNNVYSWGRGTNGQLGHGDTIDRNSPKIIEAL 380
BLAST of mRNA_S-firma_F_contig10700.954.1 vs. uniprot
Match: A0A371E1S9_MUCPR (Ultraviolet-B receptor UVR8 (Fragment) n=2 Tax=Phaseoleae TaxID=163735 RepID=A0A371E1S9_MUCPR) HSP 1 Score: 134 bits (337), Expect = 2.730e-33 Identity = 74/208 (35.58%), Postives = 127/208 (61.06%), Query Frame = 1
Query: 1 VQVTRVSAGVAHGVVLTATGEAWSFGSGKDGQLGLGDVEDRSSPQFVRSLYGKRVLAVAAGGWHTV-FTTNAGTYATGDNRFGQLGLGHTESRMLPALVVATREEVMVEAAAGAYHTLTLTAAGCVWACGSNKYRQLGIAECVEPFVDTPHPLLAFRSVEPAQIACGTAHSLFVTAGGDLWTWGRGDAGQLGHGDTNHVDEPKLVKSL 621
V V V+AG H V +T GE + +G G+ G LGLGD DR P+ V S+ +++ VA G HT+ +++ G Y G +++GQLG G+ E ++P ++A ++++ E + G H++ LT++G ++ G NK+ Q+G+ + V+ +P + + QI+CG H++ VT ++++WGRG GQLGHGDT + PK++++L
Sbjct: 232 VPVKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGNFEDYLVPHKLLALSDKIVCEVSGGWRHSMALTSSGLLYGWGWNKFGQVGVGDNVDR--SSPVQVKFPHDQKVVQISCGWRHTIAVTDKENVYSWGRGTNGQLGHGDTIDRNSPKIIEAL 437
BLAST of mRNA_S-firma_F_contig10700.954.1 vs. uniprot
Match: A0A5B7BRW3_DAVIN (Putative ultraviolet-B receptor UVR8 n=3 Tax=Nyssaceae TaxID=4289 RepID=A0A5B7BRW3_DAVIN) HSP 1 Score: 132 bits (331), Expect = 7.080e-33 Identity = 75/208 (36.06%), Postives = 125/208 (60.10%), Query Frame = 1
Query: 1 VQVTRVSAGVAHGVVLTATGEAWSFGSGKDGQLGLGDVEDRSSPQFVRSLYGKRVLAVAAGGWHTV-FTTNAGTYATGDNRFGQLGLGHTESRMLPALVVATREEVMVEAAAGAYHTLTLTAAGCVWACGSNKYRQLGIAECVEPFVDTPHPLLAFRSVEPAQIACGTAHSLFVTAGGDLWTWGRGDAGQLGHGDTNHVDEPKLVKSL 621
V V V+AG H +T GE + +G G+ G LGLGD +DR PQ V ++ G++++ VA G HT+ +++ G Y G +++GQLG G E ++P + A E ++ + + G HT+ LT+ G ++ G NK+ Q+G+ + V+ +P + R + QI+CG H+L VT ++++WGRG GQLGHG++ + PK+++ L
Sbjct: 173 VSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRDDRLVPQKVSNVDGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLIPHKLEALHESLISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHC--SPVQVKFPRDQKVVQISCGWRHTLAVTERNNVFSWGRGTNGQLGHGESIDRNIPKIIEPL 378
BLAST of mRNA_S-firma_F_contig10700.954.1 vs. uniprot
Match: A0A388LWE1_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LWE1_CHABU) HSP 1 Score: 129 bits (324), Expect = 8.370e-33 Identity = 72/209 (34.45%), Postives = 121/209 (57.89%), Query Frame = 1
Query: 4 QVTRVSAGVAHGVVLTATGEAWSFGSGKDGQLGLGDVEDRSSPQFVRSLYGKRVLAVAAGGWHTVFTTNAGT-YATGDNRFGQLGLGHTESRMLPALVVATREEVMVEAAAGAYHTLTLTAAGCVWACGSNKYRQLGIAECVEPFVDTPHPLLAFRSVEPAQIACGTAHSLFVTAGGDLWTWGRGDAGQLGHGDTNHVDEPKLVKSLVK 627
+V ++AG H +T G+ + +G GK G LG GD +DR P V ++ + + +VA G HT+ +G Y G +++GQLG G ++P +V A + ++ EAA G HT+ LT+ G V+A G N++ Q+GI ++ +P + + + A + CG H++ +T G++++WGRG +GQLGHGD PK++++L K
Sbjct: 46 KVKMLAAGAEHTAAVTEDGKLYGWGWGKYGNLGHGDRQDRMLPALVTAVEDEPMKSVACGWRHTIAVAVSGRLYTFGWSKYGQLGHGDYRDHLVPHIVDALTDFIISEAAGGWRHTVGLTSEGKVYAWGWNRFGQIGIGNNIDQC--SPQLIQSLADMRVATVCCGWRHTVAITEDGNVFSWGRGTSGQLGHGDLCDRSSPKMIEALSK 252
BLAST of mRNA_S-firma_F_contig10700.954.1 vs. uniprot
Match: UPI001F5F7B8D (ultraviolet-B receptor UVR8-like n=1 Tax=Vigna umbellata TaxID=87088 RepID=UPI001F5F7B8D) HSP 1 Score: 131 bits (330), Expect = 1.090e-32 Identity = 74/212 (34.91%), Postives = 124/212 (58.49%), Query Frame = 1
Query: 1 VQVTRVSAGVAHGVVLTATGEAWSFGSGKDGQLGLGDVEDRSSPQFVRSLYGKRVLAVAAGGWHTV-FTTNAGTYATGDNRFGQLGLGHTESRMLPALVVATREEVMVEAAAGAYHTLTLTAAGCVWACGSNKYRQLGIAE----CVEPFVDTPHPLLAFRSVEPAQIACGTAHSLFVTAGGDLWTWGRGDAGQLGHGDTNHVDEPKLVKSL 621
+ + V+AG H V +T GE + +G G+ G LGLGD DR P+ V S+ +++ VA G HT+ +++ G Y G +++GQLG G+ E ++P + A +E++ + + G H++ LT+ G ++ G NK+ Q+G+ + C V PH + QI+CG H++ VT ++++WGRG GQLGHGDT + PK++++L
Sbjct: 175 IPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSIDCDKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGNFEDSLVPHKLQALSDELICQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVDDNVDRCSPVQVKFPH------DQKIVQISCGWRHTIAVTDKNNVYSWGRGTNGQLGHGDTIDRNSPKIIEAL 380
BLAST of mRNA_S-firma_F_contig10700.954.1 vs. uniprot
Match: A0A200PYV0_9MAGN (Regulator of chromosome condensation n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PYV0_9MAGN) HSP 1 Score: 130 bits (328), Expect = 2.000e-32 Identity = 73/206 (35.44%), Postives = 124/206 (60.19%), Query Frame = 1
Query: 7 VTRVSAGVAHGVVLTATGEAWSFGSGKDGQLGLGDVEDRSSPQFVRSLYGKRVLAVAAGGWHTVFTTNAGT-YATGDNRFGQLGLGHTESRMLPALVVATREEVMVEAAAGAYHTLTLTAAGCVWACGSNKYRQLGIAECVEPFVDTPHPLLAFRSVEPAQIACGTAHSLFVTAGGDLWTWGRGDAGQLGHGDTNHVDEPKLVKSL 621
V V+AG H +T G+ + +G G+ G LGLGD DR PQ V ++YG++++ VA G HT+ +++G+ Y G +++GQLG G E ++P + A +V+ + + G HT+ +T+ G ++ G NK+ Q+G+ + V+ +P + R I+CG H++ VT ++++WGRG GQLGHGDT + PK++++L
Sbjct: 173 VKMVAAGAEHTAAVTEDGDLFGWGWGRYGNLGLGDRNDRLVPQKVSAVYGQKMVLVACGWRHTISVSSSGSLYTYGWSKYGQLGHGDFEDHLIPHQLEALSNDVVSQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHC--SPVQVTFPREQAIVHISCGWRHTIAVTDRHNVFSWGRGTNGQLGHGDTIDRNVPKIIETL 376
BLAST of mRNA_S-firma_F_contig10700.954.1 vs. uniprot
Match: A0A2R6XJP5_MARPO (HECT domain-containing protein n=5 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XJP5_MARPO) HSP 1 Score: 133 bits (334), Expect = 2.740e-32 Identity = 78/193 (40.41%), Postives = 113/193 (58.55%), Query Frame = 1
Query: 52 ATGEAWSFGSGKDGQLGLGDVEDRSSPQFVRSLYGKRVLAVAAGGWHTVFTTNAGT-YATGDNRFGQLGLGHTESRMLPALVVATREEVMVEAAAGAYHTLTLTAAGCVWACGSNKYRQLGIAECVEPFVDTPHPLLA--FRSVEPAQIACGTAHSLFVTAGGDLWTWGRGDAGQLGHGDTNHVDEPKLVKSL 621
A+ +S+G G GQLGLGD DRS P V+SL K +L VAAG +HT F T G Y TG+N GQLG E ++LP V A + A G HT+ +T G + + G+ ++ Q+G E VD+ P + R ++ ++ACG AH++ +T GD++T+G+G G LGHG + +D PKLV++L
Sbjct: 6 ASVSVYSWGRGDFGQLGLGDESDRSFPSLVQSLADKDILHVAAGDFHTAFLTGDGELYTTGNNECGQLGAKSRELQLLPIRVAALDTYTISHVACGQKHTVAVTDTGALASWGAAEFGQVGHKEAAGS-VDSVQPRIVKGTRELQFVRVACGAAHTVALTGSGDVYTFGQGAFGALGHGSKDDIDSPKLVETL 197
BLAST of mRNA_S-firma_F_contig10700.954.1 vs. uniprot
Match: A0A443PPR1_9MAGN (Regulator of chromosome condensation n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PPR1_9MAGN) HSP 1 Score: 129 bits (325), Expect = 5.100e-32 Identity = 74/208 (35.58%), Postives = 124/208 (59.62%), Query Frame = 1
Query: 1 VQVTRVSAGVAHGVVLTATGEAWSFGSGKDGQLGLGDVEDRSSPQFVRSLYGKRVLAVAAGGWHTVFTTNAGT-YATGDNRFGQLGLGHTESRMLPALVVATREEVMVEAAAGAYHTLTLTAAGCVWACGSNKYRQLGIAECVEPFVDTPHPLLAFRSVEPAQIACGTAHSLFVTAGGDLWTWGRGDAGQLGHGDTNHVDEPKLVKSL 621
V V V+AG H +T G+ + +G G+ G LGLGD DR P+ V ++ G+++++VA G HT+ +++G+ Y G +++GQLG G E ++P + A R + + + G HT+ LT+ G ++ G NK+ Q+GI + + +P + + QI+CG H+L VT ++++WGRG +GQLGHGD+ + PKL++ L
Sbjct: 167 VSVKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRSDRLVPEKVSAVDGQKMVSVACGWRHTISVSSSGSLYTYGWSKYGQLGHGDFEDHLIPHQLEALRNNFVTQISGGWRHTMALTSDGSLYGWGWNKFGQIGIGDSDDRC--SPVQVKFPPDQKVVQISCGWRHTLAVTDKDNVFSWGRGTSGQLGHGDSIDRNIPKLIEHL 372
BLAST of mRNA_S-firma_F_contig10700.954.1 vs. uniprot
Match: I1JXY7_SOYBN (Uncharacterized protein n=11 Tax=Phaseoleae TaxID=163735 RepID=I1JXY7_SOYBN) HSP 1 Score: 129 bits (325), Expect = 9.030e-32 Identity = 71/208 (34.13%), Postives = 126/208 (60.58%), Query Frame = 1
Query: 1 VQVTRVSAGVAHGVVLTATGEAWSFGSGKDGQLGLGDVEDRSSPQFVRSLYGKRVLAVAAGGWHTV-FTTNAGTYATGDNRFGQLGLGHTESRMLPALVVATREEVMVEAAAGAYHTLTLTAAGCVWACGSNKYRQLGIAECVEPFVDTPHPLLAFRSVEPAQIACGTAHSLFVTAGGDLWTWGRGDAGQLGHGDTNHVDEPKLVKSL 621
V + V+AG H V +T GE + +G G+ G LGLGD DR +P+ V S+ +++ VA G HT+ +++ G Y G +++GQLG G+ E ++P + A ++++ + + G H++ LT+ G ++ G NK+ Q+G+ + ++ +P + + QI+CG H++ VT ++++WGRG GQLGHGDT + PK++++L
Sbjct: 212 VPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHC--SPVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEAL 417 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10700.954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10700.954.1 >prot_S-firma_F_contig10700.954.1 ID=prot_S-firma_F_contig10700.954.1|Name=mRNA_S-firma_F_contig10700.954.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=209bp VQVTRVSAGVAHGVVLTATGEAWSFGSGKDGQLGLGDVEDRSSPQFVRSLback to top mRNA from alignment at S-firma_F_contig10700:2964..3590- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10700.954.1 ID=mRNA_S-firma_F_contig10700.954.1|Name=mRNA_S-firma_F_contig10700.954.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=627bp|location=Sequence derived from alignment at S-firma_F_contig10700:2964..3590- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10700:2964..3590- >mRNA_S-firma_F_contig10700.954.1 ID=mRNA_S-firma_F_contig10700.954.1|Name=mRNA_S-firma_F_contig10700.954.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1254bp|location=Sequence derived from alignment at S-firma_F_contig10700:2964..3590- (Sphaerotrichia firma ET2_F female)back to top |