prot_S-firma_F_contig107.941.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig107.941.1
Unique Nameprot_S-firma_F_contig107.941.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length388
Homology
[Close]
BLAST of mRNA_S-firma_F_contig107.941.1 vs. uniprot
Match: D8LE89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE89_ECTSI)

HSP 1 Score: 303 bits (775), Expect = 1.110e-96
Identity = 231/403 (57.32%), Postives = 256/403 (63.52%), Query Frame = 0 
Query:    2 GSNVASAWMDDMISKGFVRRGFLPPHAGGAPASRHVGSPIEMIHTPSAAGLVIGSGNPPSPAPAQQRL---VQETGS-SRNWLQAPLRECARNAGDDGALARSLLDAGAATDILDRAGRSPLHWACTRGNTAV--AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAAAALRAPXXXXXXXXXXAAVVEKASPFA--MHYDESMLSIVDARNAYGSTALHRAAFNGRDGVVLALLRGGAGVSVVGRSGRSALHLACQNAHPACVGILLAWGADESARANDGSTPWTELAHAAEIRPAGCPRVAETARLLNAARGSRAWGRRGWLLMLKDEHNRQMVEV---------GEEGDDGDGVCADLAGLVGQLLAVGEEGCFRMVVGFL 387
            G  +  AW +DMISKGFV++  LP H GG PA+ H GSPIE I  P AA       +  +           VQETG+ SR WLQ+PLR+CARNA DDGALARSLLDAGA T+  D  GRSPLHWACTRGNTAV  AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            G   A+L AP              E + P A  M     + SIVDARN YGSTALHRAAFNGR+GVVLALLRGGA V VVG SGR                        ESA A DGSTPW++LA AAE RP GCPRVA+TA LLN ARG+RAW RRGWLLML+D+HNR + E          G   D  DG   D A LV QL+ +GEEGCFR+VVGFL
Sbjct:    6 GDGMNMAWFNDMISKGFVKQRHLPQHTGGPPAAGHAGSPIESILNPDAANENRSPDSDQAXXXXXXXXXXQVQETGAASRTWLQSPLRDCARNADDDGALARSLLDAGAPTNFFDSTGRSPLHWACTRGNTAVVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFYGFAPIGLPPGNVPASLVAPALEAE---------ELSWPMAAPMPQQNGVESIVDARNVYGSTALHRAAFNGREGVVLALLRGGADVCVVGNSGRXXXXXXXXXXXXXXXXXXXXXXXXESAIAKDGSTPWSQLALAAETRPRGCPRVAKTALLLNTARGARAWARRGWLLMLRDKHNRGVFEAEAIDLDGRGGACSDMEDGQGEDFARLVNQLVGIGEEGCFRLVVGFL 399
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig107.941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LE89_ECTSI1.110e-9657.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 148..163
score: 44.86
coord: 275..289
score: 36.57
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 259..288
e-value: 6.5
score: 15.7
coord: 226..255
e-value: 0.12
score: 21.5
coord: 114..144
e-value: 0.014
score: 24.5
coord: 147..178
e-value: 0.35
score: 19.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 147..169
score: 10.018
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 114..146
score: 11.808
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 259..291
score: 10.686
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 226..258
score: 10.633
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 209..324
e-value: 4.6E-21
score: 77.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 67..184
e-value: 2.0E-22
score: 81.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 94..298
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 231..304
e-value: 2.8E-6
score: 27.8
coord: 87..170
e-value: 4.8E-12
score: 46.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 83..296
score: 37.798
NoneNo IPR availablePANTHERPTHR24124FAMILY NOT NAMEDcoord: 98..169
coord: 143..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig107contigS-firma_F_contig107:14904..18227 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig107.941.1mRNA_S-firma_F_contig107.941.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig107 14904..18853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig107.941.1 ID=prot_S-firma_F_contig107.941.1|Name=mRNA_S-firma_F_contig107.941.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=388bp
MGSNVASAWMDDMISKGFVRRGFLPPHAGGAPASRHVGSPIEMIHTPSAA
GLVIGSGNPPSPAPAQQRLVQETGSSRNWLQAPLRECARNAGDDGALARS
LLDAGAATDILDRAGRSPLHWACTRGNTAVAVALLDAGADGLARDGAGKT
PLHCAAQVGHTPIVQALLDSYGFGSAPDGLAAAALRAPPPPPPPPASQAA
VVEKASPFAMHYDESMLSIVDARNAYGSTALHRAAFNGRDGVVLALLRGG
AGVSVVGRSGRSALHLACQNAHPACVGILLAWGADESARANDGSTPWTEL
AHAAEIRPAGCPRVAETARLLNAARGSRAWGRRGWLLMLKDEHNRQMVEV
GEEGDDGDGVCADLAGLVGQLLAVGEEGCFRMVVGFL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt