mRNA_S-firma_F_contig10688.929.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10688.929.1 vs. uniprot
Match: A0A485KQM4_9STRA (Aste57867_10543 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQM4_9STRA) HSP 1 Score: 390 bits (1001), Expect = 1.350e-124 Identity = 233/495 (47.07%), Postives = 301/495 (60.81%), Query Frame = 1
Query: 10 PTRVQQLAVPRIMDGSDVFVKSHTGSGKTLTYLVPVVNSLLSRASRVSRGDGTMAVIVAPTRELISQIFNVVQRVLRPFPWLVATSITGGEKRKSEKARLRKGAAVVVATPGRLLDHLQHTESFNTKGVEVLVLDEADRLLDMGFAAQLEGIFDALATSRHHAL--QTVLCSATITQPVRDLAAKYLQDPVTINADEGQAAGAGNALPTPRALTQYFALVPTKWRLVTLLALLRQQLAA--AAKTIVFFSTCDSVDFHHNIISQL-WASLAADGVFGVAEAGTPSLYHLHGNLPQHVRAATIKGFATGPGSVLFATDVAARGLDLPVVQVIVQMDPPTETTEYVHRVGRTARLGKSGKSVLFLAPSESGYLETLAGYGVEVKPLKTDQLLAALVGVKPTAPPKPVRALLDSAAQAASRGESQKATERYAV-AWQNTCEHLVETDGKLGEQAPSAFQAFVRAYACHEKSTRHVFHVRSLHLGHVAKSFGLKQQPTA 1476
PTRVQ +VP I G DV +KS TGSGKTL+Y +P+V+ L+SR RV+R +G +A+++APTREL QI ++R+L+ ++VA S+ GGEK+K+EKARLRKG +++VATPGRL+DHL +T SF ++ L+LDEADRLLD+GF + I D LA + + Q++L SATI V LAA LQ P I+AD + GA + TP L Q+F +VP K RL L LR + AK +VF STCD+VDF + + W AA +FG P+++ LHGN+ Q R AT + F +LF TDVAARGL+LP VQ IVQ DPPTET +YVHRVGRTAR G G S+LFL PSES Y + L G+ V L D LA SA + + S+KA V Q E V + +L E A AFQ+FVR+YA H TR FHVRSLH GHVAKSF L++ P +
Sbjct: 231 PTRVQVASVPAICAGGDVLLKSETGSGKTLSYCLPMVHRLMSRDVRVNRSEGCLAMVLAPTRELCMQIQETLERLLKVAVYIVAGSVVGGEKKKTEKARLRKGVSILVATPGRLIDHLTNTHSFTYNRLQFLILDEADRLLDLGFERSITQILDCLAAKQDDDVVRQSILVSATINAGVERLAALSLQSPRFIDADSAK--GAADTYATPDQLIQHFMIVPAKQRLCALAGFLRAECRRNKRAKIVVFLSTCDAVDFVSTLFQKCTWPQSAA--MFG------PAVFRLHGNVNQQDRTATFQAFCKASAGILFCTDVAARGLNLPTVQWIVQYDPPTETKDYVHRVGRTARSGAVGNSLLFLLPSESAYCDHLKSLGLNVTALSLDSTLAR------------------SAFKGEFKASSKKAVHEVVVHELQYLFEQTVLANAELFEMACQAFQSFVRSYATHSSETRQYFHVRSLHFGHVAKSFALREPPAS 697
BLAST of mRNA_S-firma_F_contig10688.929.1 vs. uniprot
Match: UPI000C052A7E (probable ATP-dependent RNA helicase DDX31 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C052A7E) HSP 1 Score: 380 bits (975), Expect = 3.240e-123 Identity = 224/510 (43.92%), Postives = 314/510 (61.57%), Query Frame = 1
Query: 1 LTAPTRVQQLAVPRIMDGSDVFVKSHTGSGKTLTYLVPVVNSLLSRASRVSRGDGTMAVIVAPTRELISQIFNVVQRVLRPFPWLVATSITGGEKRKSEKARLRKGAAVVVATPGRLLDHLQHTESFNTKGVEVLVLDEADRLLDMGFAAQLEGIFDALATSRHHAL--QTVLCSATITQPVRDLAAKYLQDPVTINA-------DEGQAAGAGNA----LPTPRALTQYFALVPTKWRLVTLLALL----RQQLAAAAKTIVFFSTCDSVDFHHNIISQLWASLAADGVFGVAEAGTPSLYHLHGNLPQHVRAATIKGFATGPGSVLFATDVAARGLDLPVVQVIVQMDPPTETTEYVHRVGRTARLGKSGKSVLFLAPSESGYLETLAGYGVEVKPLKTDQLLAALVGVKPTAPPKPVRALLDSAAQAASRGESQKATERYAVAWQNTCEHLVETDGKLGEQAPSAFQAFVRAYACHEKSTRHVFHVRSLHLGHVAKSFGLKQQPTAL 1479
LT T VQ++A+P +++G DVFVKS TG+GKTLTY VPV++SL + ++SR DG AVI+ PTREL Q FNV+QR+++PF W+V + GGEKRKSEKARLRKG V+VATPGRLLDH++ T+S K V+ ++LDEADRLLD+GF + I A+ S H + QTVL SAT+++ V L L +P++++ ++ +A A ++ TP+ L Q+F +VP+K RLVTL A L + + + A K IVF S+ DSVDFH N+ + +S+A + + LHGN+ Q R + K F+ ++F TDVAARGLDLP V IVQ + P +YVHRVGRTAR+G G ++LFL P+E YL+ L +G+ + + + +L L G A+ ++ QKA E A QN+ E V + + A +A+Q+FVRAYA + S +H+FHVR+LHLGHVAKSF L++ P L
Sbjct: 11 LTTMTSVQKVAIPSLIEGRDVFVKSKTGTGKTLTYAVPVIHSLQNITPKISRSDGPYAVILVPTRELAIQSFNVLQRLVKPFQWVVPGVVMGGEKRKSEKARLRKGVNVLVATPGRLLDHIEKTKSLELKRVQWIILDEADRLLDLGFEKDVSSILTAVKNSLHSGVRCQTVLLSATLSEGVERLVGISLHNPLSVDVTTEDGGCEKKEATNAQSSSEASFTTPQQLKQFFIIVPSKLRLVTLAAFLLMKNQPEESLATKMIVFMSSRDSVDFHCNLFEKSLSSVAKVRLV---------FFKLHGNMSQSERTSVFKSFSDATRGIMFCTDVAARGLDLPHVNWIVQYNTPGNPADYVHRVGRTARIGLKGNALLFLTPAEVEYLDILKQHGISPEEILVNDVLKTLTG---------------DASLKIAKNVDQKAQES-ATELQNSFEDYVLSSDLCLKAAKTAYQSFVRAYATYPSSLKHIFHVRNLHLGHVAKSFSLREAPKEL 495
BLAST of mRNA_S-firma_F_contig10688.929.1 vs. uniprot
Match: K1PGA0_CRAGI (RNA helicase n=3 Tax=Crassostrea gigas TaxID=29159 RepID=K1PGA0_CRAGI) HSP 1 Score: 382 bits (982), Expect = 3.510e-122 Identity = 219/505 (43.37%), Postives = 305/505 (60.40%), Query Frame = 1
Query: 1 LTAPTRVQQLAVPRIMDGSDVFVKSHTGSGKTLTYLVPVVNSLLSRASRVSRGDGTMAVIVAPTRELISQIFNVVQRVLRPFPWLVATSITGGEKRKSEKARLRKGAAVVVATPGRLLDHLQHTESFNTKGVEVLVLDEADRLLDMGFAAQLEGIFDALATSRHHALQTVLCSATITQPVRDLAAKYLQDPVTI---NADEGQAAGAGNALPT--------PRALTQYFALVPTKWRLVTLLALL---RQQLAAAAKTIVFFSTCDSVDFHHNIISQLWASLAADGVFGVAEAGTPSLYHLHGNLPQHVRAATIKGFATGPGSVLFATDVAARGLDLPVVQVIVQMDPPTETTEYVHRVGRTARLGKSGKSVLFLAPSESGYLETLAGYGVEVKPLKTDQLLAALVGVKPTAPPKPVRALLDSAAQAASRGESQKATERYAVAWQNTCEHLVETDGKLGEQAPSAFQAFVRAYACHEKSTRHVFHVRSLHLGHVAKSFGLKQQPT 1473
+T T VQQ A+P +M G DV VKS TGSGKTLT+ VPVV L S ++SR DG +A+++ PTREL+ Q F +R++ PF W+V + GGEKRKSEKARLRKG ++V TPGRLLDH+++T S + V+ LVLDEADRLLD+G+ + I AL T H QTVL SAT+++ V LA L DP+ I NA+E + + T P L Q F + P K RLVTL A + + + + K +VF ST DSV+FH+ ++ L+ A+ +AE G + LHG +PQ R + F++ VLF T+VA+RGLDLP V+ IVQ P +YVHRVGRTAR+GK G ++LF+ P+E YL++L+G+G+ ++ + +L L+ A+ D + + + K E A QN E+ V D ++ E A AFQ+FVRAYA + + +FHVR+LHLGH+AKSFGL++ P+
Sbjct: 165 ITQMTTVQQRAIPHLMSGRDVMVKSQTGSGKTLTFAVPVVQHLQSLTPKISRMDGVLALVIVPTRELVIQCFETFKRLVNPFQWVVPGCLMGGEKRKSEKARLRKGMNILVCTPGRLLDHIRNTNSLSLSKVKWLVLDEADRLLDLGYEKDVGEIISALDTESHR--QTVLLSATLSEGVERLAGMSLTDPLRIDVSNAEEENSQSNSESSKTQKNENFVVPEKLRQSFVITPCKLRLVTLTAFILLKMKMMTSPGKMVVFLSTQDSVEFHYKLMKHLFGGEEAEDNPNLAEEGDVDFFKLHGEMPQKERTKVYQEFSSAKTGVLFCTNVASRGLDLPDVRWIVQYTTPGAVQDYVHRVGRTARVGKQGHALLFIMPAEVEYLKSLSGHGISMEEINMADILKTLI-----------IAVQDMVSDSDRKRMPPKTYEECATYIQNCFENFVVEDKEMSEMAKKAFQSFVRAYATYPSDLKTIFHVRNLHLGHLAKSFGLREAPS 656
BLAST of mRNA_S-firma_F_contig10688.929.1 vs. uniprot
Match: A0A1V9YZI0_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZI0_9STRA) HSP 1 Score: 383 bits (983), Expect = 4.250e-122 Identity = 230/497 (46.28%), Postives = 300/497 (60.36%), Query Frame = 1
Query: 4 TAPTRVQQLAVPRIMDGSDVFVKSHTGSGKTLTYLVPVVNSLLSRASRVSRGDGTMAVIVAPTRELISQIFNVVQRVLRPFPWLVATSITGGEKRKSEKARLRKGAAVVVATPGRLLDHLQHTESFNTKGVEVLVLDEADRLLDMGFAAQLEGIFDALATSRHHAL--QTVLCSATITQPVRDLAAKYLQDPVTINADEGQAAGAGNALPTPRALTQYFALVPTKWRLVTLLALLRQQL--AAAAKTIVFFSTCDSVDFHHNIISQL-WASLAADGVFGVAEAGTPSLYHLHGNLPQHVRAATIKGFATGPGSVLFATDVAARGLDLPVVQVIVQMDPPTETTEYVHRVGRTARLGKSGKSVLFLAPSESGYLETLAGYGVEVKPLKTDQLLAALVGVKPTAPPKPVRALLDSAAQAASRGESQKATERYAV-AWQNTCEHLVETDGKLGEQAPSAFQAFVRAYACHEKSTRHVFHVRSLHLGHVAKSFGLKQQPTA 1476
T PTRVQ +VP I + DV +KS TGSGKTL + +P+V+ L+S+ R+SR DG +A+++APTREL +QI ++R+L+ ++VA S+ GGEK+KSEKARLRKG ++VATPGRL+DHL +T +F +E L+LDEADRLLDMGF + I + + + + QTVL SATI V LAA L P I+AD + A TP L Q+F +VP K RL L + LR + A A+K +VF STCD+VDF + + W + +FG PS++ LHGN+ Q R +T + F VLF TDVAARGL+LP VQ IVQ DPPTET +YVHRVGRTAR G G S+LFL PSE+ Y E L G+ + L + +A SA++ R S+KA V Q E V D L + A AFQ+FVR+YA H TR FHVRSLH GHVAKSFGL++ P +
Sbjct: 215 TQPTRVQVKSVPAISEAGDVLLKSETGSGKTLAFCLPMVHRLMSKQPRLSRTDGCLAMVLAPTRELCTQIHETLERLLKVAVYIVAGSVVGGEKKKSEKARLRKGVTILVATPGRLVDHLTNTHAFQYNRLEFLILDEADRLLDMGFERSITQILEFIKAKQDDDVVRQTVLVSATINSGVERLAAMSLTSPRFIDADTKEQA----VYATPEQLVQHFMIVPAKQRLCALASFLRSECKKAKASKIVVFLSTCDAVDFITTLFQKCTWPQRSE--MFG------PSIFRLHGNVNQQERTSTFQAFCKATSGVLFCTDVAARGLNLPTVQWIVQYDPPTETRDYVHRVGRTARSGAVGNSLLFLLPSEAAYCEHLEANGLRLTALNYEATIAR------------------SASKGEFRSSSKKALHEVIVHELQYLFEQSVLADSALFDMACQAFQSFVRSYATHASDTRQYFHVRSLHFGHVAKSFGLREPPAS 681
BLAST of mRNA_S-firma_F_contig10688.929.1 vs. uniprot
Match: A0A6G0XMM6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XMM6_9STRA) HSP 1 Score: 380 bits (976), Expect = 5.360e-121 Identity = 228/495 (46.06%), Postives = 300/495 (60.61%), Query Frame = 1
Query: 10 PTRVQQLAVPRIMDGSDVFVKSHTGSGKTLTYLVPVVNSLLSRASRVSRGDGTMAVIVAPTRELISQIFNVVQRVLRPFPWLVATSITGGEKRKSEKARLRKGAAVVVATPGRLLDHLQHTESFNTKGVEVLVLDEADRLLDMGFAAQLEGIFDALATSRHHAL--QTVLCSATITQPVRDLAAKYLQDPVTINADEGQAAGAGNALPTPRALTQYFALVPTKWRLVTLLALLRQQLAA--AAKTIVFFSTCDSVDFHHNIISQL-WASLAADGVFGVAEAGTPSLYHLHGNLPQHVRAATIKGFATGPGSVLFATDVAARGLDLPVVQVIVQMDPPTETTEYVHRVGRTARLGKSGKSVLFLAPSESGYLETLAGYGVEVKPLKTDQLLAALVGVKPTAPPKPVRALLDSAAQAASRGESQKATERYAV-AWQNTCEHLVETDGKLGEQAPSAFQAFVRAYACHEKSTRHVFHVRSLHLGHVAKSFGLKQQPTA 1476
PTRVQ +VP I+ G DV +KS TGSGKTL+Y +P+V+ L++R RV+R +G +A+I+APTREL +QI ++R+L+ ++VA S+ GGEK+ +EKARLRKG +++VATPGRLLDHL +T +F ++ LVLDEADRLLD+GF + I D L + + QT+L SATI V LAA L D I+AD + GA TP L Q+F ++P K RL L A +R + AK +VF STCD+VDF ++ + W A +FG PS++ LHGN+ Q R +T + F VLF TDVAARGL+LP VQ IVQ DPPTET +YVHRVGRTAR G G S+LFL PSE+ Y + L G+ V L + LA SA + + S+KA V Q E V + +L + A AFQ+FVR+YA H TR FHVRSLH GHVAKSF L++ P +
Sbjct: 220 PTRVQVQSVPAIICGGDVLLKSETGSGKTLSYCLPLVHRLMAREPRVNRSEGCLAMILAPTRELCTQIQETLERLLKVAVYIVAGSVVGGEKKMAEKARLRKGLSILVATPGRLLDHLTNTHAFTYTRLQFLVLDEADRLLDLGFEKSIAQILDCLTAKQDDDVKRQTILVSATINAGVERLAALSLTDSTFIDADNSK--GATTTFATPDQLVQHFMIIPAKQRLCALAAFVRSECKRNKRAKIVVFLSTCDAVDFVTSLFQKCTWPQSTA--MFG------PSVFRLHGNVVQQERTSTFQAFCKATAGVLFCTDVAARGLNLPTVQWIVQYDPPTETRDYVHRVGRTARSGAVGNSLLFLLPSEAAYCDHLQSLGLNVTALSLESTLAR------------------SAFKGEFKASSKKAVHEVVVHELQYLFEQTVLANAELFDVACQAFQSFVRSYATHSSETRQYFHVRSLHFGHVAKSFALREPPAS 686
BLAST of mRNA_S-firma_F_contig10688.929.1 vs. uniprot
Match: A0A3M6UCC0_POCDA (RNA helicase n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UCC0_POCDA) HSP 1 Score: 379 bits (972), Expect = 1.000e-120 Identity = 229/510 (44.90%), Postives = 313/510 (61.37%), Query Frame = 1
Query: 1 LTAPTRVQQLAVPRIMDGSDVFVKSHTGSGKTLTYLVPVVNSLLSRASRVSRGDGTMAVIVAPTRELISQIFNVVQRVLRPFPWLVATSITGGEKRKSEKARLRKGAAVVVATPGRLLDHLQHTESFNTKGVEVLVLDEADRLLDMGFAAQLEGIFDALATSRHHAL--QTVLCSATITQPVRDLAAKYLQDPVTINADEGQAAG----AGNA-------LPTPRALTQYFALVPTKWRLVTLLALL----RQQLAAAAKTIVFFSTCDSVDFHHNIISQLWASLAADGVFGVAEAGTPSLYHLHGNLPQHVRAATIKGFATGPGSVLFATDVAARGLDLPVVQVIVQMDPPTETTEYVHRVGRTARLGKSGKSVLFLAPSESGYLETLAGYGVEVKPLKTDQLLAALVGVKPTAPPKPVRALLDSAAQAASRGESQKATERYAVAWQNTCEHLVETDGKLGEQAPSAFQAFVRAYACHEKSTRHVFHVRSLHLGHVAKSFGLKQQPTAL 1479
LT T VQ+ A+P +++G DVFVKS TG+GKTLTY VPV++SL S ++SR DG AVI+ PTREL Q FNV+QR+++PF W+V +TGGEKRKSEKARLRKG V+VATPGRLLDH++ T+S K + ++LDEADRLLD+GF + I A+ S + QTVL SAT+ + V LA L +P++I+ G A NA TP+ L Q+F +VP+K RLVTL A L +Q+ + A K IVF S+ DSVDFH ++ + ++S+A + + LHGN+ Q R + K F+ +LF TDVAARGLDLP V I+Q + P +YVHRVGRTAR+G G ++LFL P+E YL+ L +G+ + L + +L LV A K + + QKA E A QN+ E V ++ + A +A+Q+FVRAYA + + +H+FHV++LHLGHVAKSFGL++ P L
Sbjct: 171 LTTMTSVQKAAIPLLIEGRDVFVKSKTGTGKTLTYAVPVIHSLQSITPKISRSDGPYAVILVPTRELAIQSFNVLQRLVKPFQWVVPGVVTGGEKRKSEKARLRKGVNVLVATPGRLLDHIEKTKSLELKRLRWIILDEADRLLDLGFEKDVSSILTAVKDSLLSGVRCQTVLLSATLNEGVERLAGISLYNPLSIDVTTEDGGGENKEASNAQSSSDVSFTTPQQLKQFFIIVPSKLRLVTLAAFLLWKNQQEESTATKMIVFMSSRDSVDFHCDLFEKSFSSVAKLRLV---------FFKLHGNMSQSERTSVFKSFSDATRGILFCTDVAARGLDLPHVNWILQYNTPGNPADYVHRVGRTARIGLKGNALLFLTPAEVEYLDILKQHGISPEELLVNDVLKTLVVSSGDAKLKTAKYV------------DQKAQES-ATELQNSFEDYVLSNDLCLKAAKTAYQSFVRAYATYPSNLKHIFHVKNLHLGHVAKSFGLREAPKEL 658
BLAST of mRNA_S-firma_F_contig10688.929.1 vs. uniprot
Match: A0A5D6YC17_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC17_9STRA) HSP 1 Score: 377 bits (968), Expect = 5.610e-120 Identity = 233/533 (43.71%), Postives = 306/533 (57.41%), Query Frame = 1
Query: 10 PTRVQQLAVPRIMDGSDVFVKSHTGSGKTLTYLVPVVNSLLSRASRVSRGDGTMAVIVAPTRELISQIFNVVQRVLRPFPWLVATSITGGEKRKSEKARLRKGAAVVVATPGRLLDHLQHTESFNTKGVEVLVLDEADRLLDMGFAAQLEGIFDAL-----------ATSRHHALQTVLCSATITQPVRDLAAKYLQDPVTINADEGQAAGAGNALP--------TPRALTQYFALVPTKWRLVTLLALLRQQLA-----AAAKTIVFFSTCDSVDFHHNIISQL-W--------ASLAADGVFGV---AEAGTP--------SLYHLHGNLPQHVRAATIKGFATGPGSVLFATDVAARGLDLPVVQVIVQMDPPTETTEYVHRVGRTARLGKSGKSVLFLAPSESGYLETLAGYGVEVKPLKTDQLLAALVGVKPTAPPKPVRALLDSAAQAASRGESQKATERYAVAWQNTCEHLVETDGKLGEQAPSAFQAFVRAYACHEKSTRHVFHVRSLHLGHVAKSFGLKQQPTA 1476
PT VQ ++P ++ G D VKS TGSGKTL+YL+P+V+ L RV R DG +A+I+APTREL QI ++++PF +LV +I GGEK+K+EKARLRKG +V++ATPGRL DHL +T++F ++ LVLDEADRLLDMGF Q++ I + AT R Q VL SAT+ V +LA L++P+ ++AD +A A A P TP L Q+F +VP K RLV L LRQ+L +K +VF STCDSVDFH+ + S+ W A+ A+G G A +G +++ LHGN+PQH R K F VL TDVAARGL+LP VQ IVQ DPPTET +YVHRVGRTAR G G S+LFL PSE+ YL+ L +G+ + L T++ LA VG R + E Q + V D +L A AF +FVR+YA H TR +FHVRSLH GH+AKSF L++ P +
Sbjct: 159 PTTVQVRSIPAVLSGKDALVKSETGSGKTLSYLLPIVHKLQGIEPRVKREDGCLALILAPTRELCLQILETANKLVQPFVYLVPGAIIGGEKKKAEKARLRKGLSVLIATPGRLADHLVNTQAFRYAQLQFLVLDEADRLLDMGFEKQIKQILSIIDRPRDDGERDAATPRR---QNVLVSATVNTGVEELAKMSLKNPLVVDADGADSAAAAAAKPASAHESFSTPHQLMQHFMIVPAKARLVALTCFLRQELQHQPKQRQSKVVVFMSTCDSVDFHYGLFSKTAWPAGRHAKPATATAEGAEGADAPAASGVSHSLFGSNGAVFRLHGNIPQHERMTAFKNFCAAASGVLLCTDVAARGLNLPTVQWIVQYDPPTETRDYVHRVGRTARSGNQGSSLLFLMPSEAEYLDHLQKHGLTMAALSTEKTLAR-VGKH----------------GGFLRSNKKLPHEVVQSDLQFLYDQTVLADKELFALACQAFHSFVRSYATHTSDTRAIFHVRSLHFGHIAKSFALREPPAS 671
BLAST of mRNA_S-firma_F_contig10688.929.1 vs. uniprot
Match: A0A8K1C3Q3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3Q3_PYTOL) HSP 1 Score: 376 bits (965), Expect = 5.180e-119 Identity = 228/524 (43.51%), Postives = 303/524 (57.82%), Query Frame = 1
Query: 10 PTRVQQLAVPRIMDGSDVFVKSHTGSGKTLTYLVPVVNSLLSRASRVSRGDGTMAVIVAPTRELISQIFNVVQRVLRPFPWLVATSITGGEKRKSEKARLRKGAAVVVATPGRLLDHLQHTESFNTKGVEVLVLDEADRLLDMGFAAQLEGIFDAL-ATSRHHAL-----QTVLCSATITQPVRDLAAKYLQDPVTINADE-----------GQAAGAGNALPTPRALTQYFALVPTKWRLVTLLALLRQQLA----AAAKTIVFFSTCDSVDFHHNIISQL-WAS---------LAADGVFGVAEAGTPSLYHLHGNLPQHVRAATIKGFATGPGSVLFATDVAARGLDLPVVQVIVQMDPPTETTEYVHRVGRTARLGKSGKSVLFLAPSESGYLETLAGYGVEVKPLKTDQLLAALVGVKPTAPPKPVRALLDSAAQAASRGESQKATERYAVAWQNTCEHLVET----DGKLGEQAPSAFQAFVRAYACHEKSTRHVFHVRSLHLGHVAKSFGLKQQPTA 1476
PT VQ +P+++ G DV VKS TGSGKTL+YL+P+V L S RV R DG +A+I+APTREL QI +++ + F +LV + GGEK+K+EKARLRKG ++++ATPGRL DHL +T+SFN ++ LVLDEADRLLDMGF Q+ I + + AT++++ Q VL SATI V++LA L PV I+AD+ +AAG TP L Q+F +VPTK RL L LRQ+L K +VF STCD+VDFH+ + + W S A GV +L+ LHGN+PQ R K F T VLF TD+AARGL+LP VQ IVQ DPPTET +YVHRVGRTAR G G S+LFL PSES YL+ L + + + L ++ + + A +S+K + Q+ ++L E D +L E A F +FVR+YA H TR +FHVR LH GH+AKSF L++ P +
Sbjct: 215 PTNVQVKTIPQVLLGKDVLVKSETGSGKTLSYLLPIVQKLQSIEPRVGRQDGCLALILAPTRELCLQIQETAEKLTKAFVFLVPGVVVGGEKKKAEKARLRKGISILIATPGRLADHLVNTQSFNYARLQFLVLDEADRLLDMGFQKQITQILEIIDATTKNNQYTGGRRQNVLVSATINSGVQELAKMSLTKPVLIDADKDNQQYDAEIASNEAAGGPERFSTPHQLMQHFMIVPTKTRLCALSCFLRQELTNPERKQCKIVVFMSTCDAVDFHYELFQKCAWPSRKGATVVEKTAKKGVVSPLLGEQGALFRLHGNIPQQERMTAFKNFCTTTTGVLFCTDIAARGLNLPTVQWIVQYDPPTETRDYVHRVGRTARSGNKGSSLLFLMPSESEYLDYLKKHNLTLNALSLEKTITRV-------------------ANGGGFSKSKKKLLHEVI--QSDLQYLFEQTLLGDKELFELACQGFHSFVRSYATHSSDTRSIFHVRGLHFGHIAKSFALREPPAS 717
BLAST of mRNA_S-firma_F_contig10688.929.1 vs. uniprot
Match: M4C4J8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4J8_HYAAE) HSP 1 Score: 376 bits (965), Expect = 6.840e-119 Identity = 236/527 (44.78%), Postives = 309/527 (58.63%), Query Frame = 1
Query: 10 PTRVQQLAVPRIMDGSDVFVKSHTGSGKTLTYLVPVVNSLLSRASRVSRGDGTMAVIVAPTRELISQIFNVVQRVLRPFPWLVATSITGGEKRKSEKARLRKGAAVVVATPGRLLDHLQHTESFNTKGVEVLVLDEADRLLDMGFAAQLE---GIFDALATSRHHALQTVLCSATITQPVRDLAAKYLQDPVTI-----NADE---GQAAGAGNA-LPTPRALTQYFALVPTKWRLVTLLALLRQQLAAA-----------AKTIVFFSTCDSVDFHHNIISQL-W----ASLAADGVFGVAEAGTPSLY-------HLHGNLPQHVRAATIKGFATGPGSVLFATDVAARGLDLPVVQVIVQMDPPTETTEYVHRVGRTARLGKSGKSVLFLAPSESGYLETLAGYGVEVKPLKTDQLLAALV---GVKPTAPPKPVRALLDSAAQAASRGESQKATERYAVAWQNTCEHLVETDGKLGEQAPSAFQAFVRAYACHEKSTRHVFHVRSLHLGHVAKSFGLKQQPTA 1476
PT VQ +P ++ G+D+ +KS TGSGKTL+YL+P+V L + RV R DG +A+++APTREL +QI ++++PF ++V +I GGEK+K+EKARLRKG ++VATPGRL DHL +T+SFN G++ LVLDEADRLLDMGF Q+ I D T+R Q +L SATI V+ LA L PV I N+DE + G+G TP L Q+F LVP K RL L LR++L A K +VF STCD+VDFH+ + + W S D G + G SL+ LHGN+PQ R T K F + VL TDVAARGL+LP V+ IVQ DPPTET +YVHRVGRTAR G G S+LFL PSES YL+ L+ G+++ L ++ +A + G T+ K LL Q G+ Q E+ +A D +L E A AF +FVR+YA H TR +FHVRSLH GHVAKSF L++ P +
Sbjct: 224 PTNVQVQTIPSVLKGNDILIKSETGSGKTLSYLLPIVQKLQNVTPRVQRQDGCLALVLAPTRELCTQILETTIKLIQPFVYIVPGAIIGGEKKKAEKARLRKGITILVATPGRLADHLVNTQSFNYTGLQFLVLDEADRLLDMGFEKQITQILAILDGKKTARKR--QNILVSATINSGVQQLAMLSLSSPVLIDVDATNSDEDALSETKGSGQEKFSTPHQLMQHFMLVPAKARLCALTCFLREELRNAPRDDKNGRPSKCKVVVFLSTCDAVDFHYTLFRKCAWPSGKGSPGNDDTAG-EQNGVASLFGNQGPVFRLHGNIPQQERVTTFKSFCSSSSGVLLCTDVAARGLNLPTVKWIVQYDPPTETRDYVHRVGRTARSGNQGSSLLFLMPSESEYLDYLSKQGLKLNALSLEKTVARVSKHGGFSTTSRKK----LLHEVVQ----GDLQFLYEQTLLA-----------DKELFELACQAFHSFVRSYATHSSDTRQIFHVRSLHFGHVAKSFALREPPAS 728
BLAST of mRNA_S-firma_F_contig10688.929.1 vs. uniprot
Match: A0A6A3J009_9STRA (Putative ATP-dependent RNA helicase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3J009_9STRA) HSP 1 Score: 374 bits (960), Expect = 3.690e-118 Identity = 232/525 (44.19%), Postives = 305/525 (58.10%), Query Frame = 1
Query: 10 PTRVQQLAVPRIMDGSDVFVKSHTGSGKTLTYLVPVVNSLLSRASRVSRGDGTMAVIVAPTRELISQIFNVVQRVLRPFPWLVATSITGGEKRKSEKARLRKGAAVVVATPGRLLDHLQHTESFNTKGVEVLVLDEADRLLDMGFAAQLEGIFDAL-ATSRHHALQTVLCSATITQPVRDLAAKYLQDPVTINAD---EGQAAGAG------NALPTPRALTQYFALVPTKWRLVTLLALLRQQLAAA------------AKTIVFFSTCDSVDFHHNIISQL-WAS---LAADGVFGVAEAGTPSLY-------HLHGNLPQHVRAATIKGFATGPGSVLFATDVAARGLDLPVVQVIVQMDPPTETTEYVHRVGRTARLGKSGKSVLFLAPSESGYLETLAGYGVEVKPLKTDQLLAALV---GVKPTAPPKPVRALLDSAAQAASRGESQKATERYAVAWQNTCEHLVETDGKLGEQAPSAFQAFVRAYACHEKSTRHVFHVRSLHLGHVAKSFGLKQQPTA 1476
PT VQ +P ++ G+D+ VKS TGSGKTL+YL+P+V L S + R+ R DG MA+++APTREL SQI ++++PF +LV +I GGEK+K+EKARLRKG +++ATPGRL DHL +T+SFN ++ LVLDEADRLLDMGF Q+ I L A Q +L SATI V+ LA L +PV I+AD G+ A TP L Q+F LVP K RL L LR++L A K +VF STCD+VDFH+ + + W S + D G SL+ LHGN+PQ R T K F + VL TDVAARGL+LP V+ IVQ DPPTET +YVHRVGRTAR G G S+LFL PSES YL+ L+ G+++ L + +A + G T+ K + ++ +G+ Q E+ +A D +L E A AF +FVR+YA H TR +FHVRSLH GHVAKSF L++ P +
Sbjct: 222 PTNVQVQTIPSVLKGNDILVKSETGSGKTLSYLLPIVQKLQSVSPRIQRQDGCMALVLAPTRELCSQILETANKLVQPFVFLVPGAIIGGEKKKAEKARLRKGITILIATPGRLADHLVNTQSFNYARLQFLVLDEADRLLDMGFEKQITQILTILDAQKSAQKRQNILVSATINSGVQQLAKMSLSNPVLIDADAITSGEDAATEIKATNQEKFSTPHQLMQHFMLVPAKARLCALTCFLREELRHAPRDTKKDGGPGKCKIVVFLSTCDAVDFHYALFRKCAWPSGKGSSEDADSSGDNNGVASLFGSQGPVFRLHGNIPQQERVTTFKSFCSSSSGVLLCTDVAARGLNLPTVKWIVQYDPPTETRDYVHRVGRTARSGNQGSSLLFLMPSESEYLDYLSKQGLQLNALSHENTVARVGKHGGFLTTSRKKLLHEIV--------QGDLQFLYEQTLLA-----------DKELFELACQAFHSFVRSYATHSSDTRQIFHVRSLHFGHVAKSFALREPPAS 727 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10688.929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10688.929.1 >prot_S-firma_F_contig10688.929.1 ID=prot_S-firma_F_contig10688.929.1|Name=mRNA_S-firma_F_contig10688.929.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=496bp LTAPTRVQQLAVPRIMDGSDVFVKSHTGSGKTLTYLVPVVNSLLSRASRVback to top mRNA from alignment at S-firma_F_contig10688:2907..4457- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10688.929.1 ID=mRNA_S-firma_F_contig10688.929.1|Name=mRNA_S-firma_F_contig10688.929.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1551bp|location=Sequence derived from alignment at S-firma_F_contig10688:2907..4457- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10688:2907..4457- >mRNA_S-firma_F_contig10688.929.1 ID=mRNA_S-firma_F_contig10688.929.1|Name=mRNA_S-firma_F_contig10688.929.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2976bp|location=Sequence derived from alignment at S-firma_F_contig10688:2907..4457- (Sphaerotrichia firma ET2_F female)back to top |