prot_S-firma_F_contig10671.910.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10671.910.1
Unique Nameprot_S-firma_F_contig10671.910.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length398
Homology
BLAST of mRNA_S-firma_F_contig10671.910.1 vs. uniprot
Match: A0A6H5KC99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC99_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 7.850e-92
Identity = 202/375 (53.87%), Postives = 239/375 (63.73%), Query Frame = 0
Query:   24 QASPASRNVCGPDDAEQEVWEHVQTLTPQQRRSRACAIVARAREEELAESEETSASVSRGLFLAYMRNAHGGGGGKDGGVVSLERWLEDRQAAIKKARELEAGRE---------RAQALSKAD-TDGRKVTQICPEKICPGRTRGTAPVLQGQ---------ACGSGGQSGDQXXXXXXXXXXXX---LSKRAFNAEMGDMLFSLTADGAVAARAKELAGVPLIAADLRKKWSKE-RGGGGE-DGSDLSQGREKATARTGATPSSLHEKEKVVGVPFAMELFGLEEAELLGRGKKEVEQKRELALQKYRDWSKEKSKEARKARRLEQAKQARDAERERQRRAEGLKAYRRWLRLASKEAYFSSQSNKVVPRTRLS 374
            QASPASRN CG D+ EQ+VWE VQTL+  QRR+RACAIVA+ REEEL ESE+ SASVSRGLFLAY+RN+HGG     GG VSL+RWLEDRQAA++KA   E   E         + Q + KA   +  KV +   E +   R       L  +          C  G Q G +               LSKRAFNAEMG++LFSLTADG+ AARA+ELAGVPL+AADLRKKW+ E RG G E DG D S       A   + P+      K +GVPFA+ELF LEEA LLGRG K+ E+KRE AL++YR WSKEKSKEA                R+R+++AEGLKAYRRWLRLASKEAYFS Q+NKVVPR R S
Sbjct:   18 QASPASRNACGTDEPEQQVWEDVQTLSGAQRRARACAIVAKQREEELMESEDKSASVSRGLFLAYIRNSHGGKA--RGGGVSLQRWLEDRQAAMEKALVSELKEELMRLVGSTKKTQKVDKAPGMEAMKVLRSSREGLDIHRRVKRLESLAAEEYRARKLESGCSGGRQKGGRQKPATSSLPLPSSLLLSKRAFNAEMGNVLFSLTADGSAAARARELAGVPLMAADLRKKWANEGRGVGAEADGVDASH------AERSSPPAG-----KEIGVPFAVELFELEEASLLGRGHKDAEEKRERALEQYRIWSKEKSKEAXXXXXXXXXXXXXXXXRQRRKKAEGLKAYRRWLRLASKEAYFSPQNNKVVPRVRAS 379          
BLAST of mRNA_S-firma_F_contig10671.910.1 vs. uniprot
Match: D7G8D4_ECTSI (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D4_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 8.040e-76
Identity = 201/402 (50.00%), Postives = 232/402 (57.71%), Query Frame = 0
Query:    1 MGKAFSESVEGARRARELVRRWNQASPASRNVCGPDDAEQEVWEHVQTLTPQQRRSRACAIVARAREEELAES--EETSASVSRGLFLAYMRNAHGGGGGKDGGVVSLERWLEDRQAAIKKARELEAGRERAQALSKADTDGRKVTQICPEKICPGRTRGTAPVLQGQACGSGGQSGDQXXXXXXXXXXXXLSKRAFNAEMGDMLFSLTADGAVAARAKELAGVPLIAADLRKKWSKE-RGGGGE-DGSDLSQGREKATARTGATPSSLHEKEKVVGVPFAMELFGLEEAELLGRGKKEVEQKRELALQKYRDWSKEKSKEARKARRLEQAKQARDAERERQRRAEGLKAYRRWLRLASKEAYFSSQSNKVVPRTRLSPSVRAASTPSSRTSSAGKALTCSG 398
            MGKAFSESVEG RRARE+VRRW+QASPASRN CG D  EQ+VWE VQTL+  QRR+RAC IVA+ REE L     EE    V        +  A G        V+   R   D    +K+   L A   RA+ L    + GR        +  P  +   +P                            LSKRAFNAEMGD+LFSLTADG+ AARA+ELAGVPLIAADLRKKW+KE RGGG E DG D S            T  S     K +GVPFA+ELFGLEEA LLGRG K+ E+KRE ALQ+YR WSKEKSKEA                   +R+AEGLKAYRRWLRLASKEAYFS Q+NKVVPR R S ++      SSR S   + L+CSG
Sbjct: 1194 MGKAFSESVEGTRRAREIVRRWSQASPASRNACGTDGPEQKVWEDVQTLSGAQRRARACVIVAKQREEALVSELKEELMRLVGSTKKTQKVDKAPGME------VLRSSREGLDIHRRLKRLESLAAEEHRARKLDTGGSGGRPKGG----RQKPATSSSPSPPS------------------------LLLSKRAFNAEMGDVLFSLTADGSAAARARELAGVPLIAADLRKKWAKEGRGGGAEADGVDASH-----------TEMSSPLAGKEIGVPFAVELFGLEEALLLGRGHKDAEEKRERALQQYRIWSKEKSKEAXXXXXXXXXXXXXXXXXXXRRKAEGLKAYRRWLRLASKEAYFSPQNNKVVPRVRSSGAL------SSR-SCTRRTLSCSG 1543          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10671.910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KC99_9PHAE7.850e-9253.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8D4_ECTSI8.040e-7650.00C-CAP/cofactor C-like domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..133
NoneNo IPR availableCOILSCoilCoilcoord: 293..344

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10671contigS-firma_F_contig10671:293..5073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10671.910.1mRNA_S-firma_F_contig10671.910.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10671 269..5073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10671.910.1 ID=prot_S-firma_F_contig10671.910.1|Name=mRNA_S-firma_F_contig10671.910.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=398bp
MGKAFSESVEGARRARELVRRWNQASPASRNVCGPDDAEQEVWEHVQTLT
PQQRRSRACAIVARAREEELAESEETSASVSRGLFLAYMRNAHGGGGGKD
GGVVSLERWLEDRQAAIKKARELEAGRERAQALSKADTDGRKVTQICPEK
ICPGRTRGTAPVLQGQACGSGGQSGDQQQPGAPPPPPLLLSKRAFNAEMG
DMLFSLTADGAVAARAKELAGVPLIAADLRKKWSKERGGGGEDGSDLSQG
REKATARTGATPSSLHEKEKVVGVPFAMELFGLEEAELLGRGKKEVEQKR
ELALQKYRDWSKEKSKEARKARRLEQAKQARDAERERQRRAEGLKAYRRW
LRLASKEAYFSSQSNKVVPRTRLSPSVRAASTPSSRTSSAGKALTCSG
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