prot_S-firma_F_contig10666.903.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10666.903.1
Unique Nameprot_S-firma_F_contig10666.903.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length265
Homology
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BLAST of mRNA_S-firma_F_contig10666.903.1 vs. uniprot
Match: D8LCI2_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI2_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 3.800e-17
Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0 
Query:    1 MPTWRCGHPGCDKHSSYGVKGSKEREFCGRHAKDGMVDVRSK 42
            M TWRCGHPGC KHSSYGVKG+KEREFCGRHAK GMVDVRSK
Sbjct:    1 MVTWRCGHPGCGKHSSYGVKGTKEREFCGRHAKMGMVDVRSK 42
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BLAST of mRNA_S-firma_F_contig10666.903.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 3.690e-6
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0 
Query:    5 RCGHPGCDKHSSYGVKGSKEREFCGRHAKDGMVDVRSK 42
            +CGH  C K  +YGV GSK+REFC +HA+DGMV+V +K
Sbjct:    3 QCGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNK 40
[Close]
BLAST of mRNA_S-firma_F_contig10666.903.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 4.460e-6
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0 
Query:    5 RCGHPGCDKHSSYGVKGSKEREFCGRHAKDGMVDVRSK 42
            +CGH  C K  +YGV GSK+REFC +HA+DGMV+V +K
Sbjct:   63 QCGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNNK 100
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10666.903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCI2_ECTSI3.800e-1790.48EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI2... [more]
D7FI73_ECTSI3.690e-660.53EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JT00_9PHAE4.460e-660.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10666contigS-firma_F_contig10666:1399..2193 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10666.903.1mRNA_S-firma_F_contig10666.903.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10666 1399..2193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10666.903.1 ID=prot_S-firma_F_contig10666.903.1|Name=mRNA_S-firma_F_contig10666.903.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=265bp
MPTWRCGHPGCDKHSSYGVKGSKEREFCGRHAKDGMVDVRSKRCGQEGCE
KHPSFGMDGSKKAEFCAQHAKAGMVNVSNKRCGFPSCTTRASFGVEGTKR
AEFCAQHAKDGMVDVWSKRNRCGHPGCITRASYAANGSKKGEFCARHAKD
GMINVNNKKQKGVKDRRWFGADGEAAEESAAGGVSGGGGGMGVGMGMGGI
EELLKSTDSLGDTAAAGAKRSRPIAAMLTEESAEETAAAARLFMGLRTAR
RKVDEDGSLGLASR*
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