prot_S-firma_F_contig10642.873.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10642.873.1
Unique Nameprot_S-firma_F_contig10642.873.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length355
Homology
BLAST of mRNA_S-firma_F_contig10642.873.1 vs. uniprot
Match: A0A6H5JCE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE5_9PHAE)

HSP 1 Score: 436 bits (1122), Expect = 3.080e-149
Identity = 231/342 (67.54%), Postives = 269/342 (78.65%), Query Frame = 0
Query:    8 ALLLLPGVCHGQQLITTCAELQAAFEQTQTGDVNVEISPAADIECATYTNMTMNSNTLTVSSSEDLSIFFATTLLRRVRFEVTNGAELVWETNVWFDGVGEEEEQNNDGGAVFVGTGSTVHFLNNVEMRDVYIINERDGDSDFAIFVRSGGCVWTNGEFRVDGNAVFTTCEITGAGESPPGPGGAIYVGETGSVLFNGDVSITDTFITDDFGGDGGAIYNLGKVDILGTARFEELRASEGGAIYNGVDAEFIFGTGATAFFRDVGNRDAQGSALYNLGVFEFSGPALFVDAEAPVIVAVDGSETTLSADSAFWDLDDSGAQAISAGATADITIPSSVVFVGF 349
            ALLL+PG CHG  LI TC +L AAFEQTQT DV VE+ P ADIEC T+TNMTM SN+LTVSSSE++  F  ++ L  VR +VTNGA+L WETNV F+G  EE +   DGGAV+VG GSTV FLN+V+M+D+ IINERD DSDF+ FVRSGGCVWT G FRVDG A FT C+I+GAGESPPGPGGA+YVGETGSVLFNG V+ITDT ITDDFGG GG IYNLGKV+I G +RFE++ AS G AIYNG  A F F +GA AFF+D+ NRD++GSAL+N G F+FSGPALF DAE PVIVAVD SET +S DSAFW  D+S   A+S    AD T+P SV FVGF
Sbjct:   91 ALLLIPGACHG--LIETCDDLLAAFEQTQTEDVVVEMHPFADIECETFTNMTMTSNSLTVSSSENIDNFSGSSSLVNVRLDVTNGAKLFWETNVIFEG-DEETDLMVDGGAVYVGEGSTVRFLNDVQMQDIAIINERDEDSDFSSFVRSGGCVWTAGYFRVDGEATFTGCDISGAGESPPGPGGAVYVGETGSVLFNGGVTITDTHITDDFGGSGGGIYNLGKVNIKGDSRFEDISASSGVAIYNGEGATFNFRSGARAFFKDLNNRDSEGSALFNRGFFKFSGPALFFDAELPVIVAVDNSETIISEDSAFWTWDESPGDALSVNDGADFTLPDSVTFVGF 429          
BLAST of mRNA_S-firma_F_contig10642.873.1 vs. uniprot
Match: D7FGT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT1_ECTSI)

HSP 1 Score: 420 bits (1079), Expect = 6.380e-144
Identity = 228/342 (66.67%), Postives = 261/342 (76.32%), Query Frame = 0
Query:    8 ALLLLPGVCHGQQLITTCAELQAAFEQTQTGDVNVEISPAADIECATYTNMTMNSNTLTVSSSEDLSIFFATTLLRRVRFEVTNGAELVWETNVWFDGVGEEEEQNNDGGAVFVGTGSTVHFLNNVEMRDVYIINERDGDSDFAIFVRSGGCVWTNGEFRVDGNAVFTTCEITGAGESPPGPGGAIYVGETGSVLFNGDVSITDTFITDDFGGDGGAIYNLGKVDILGTARFEELRASEGGAIYNGVDAEFIFGTGATAFFRDVGNRDAQGSALYNLGVFEFSGPALFVDAEAPVIVAVDGSETTLSADSAFWDLDDSGAQAISAGATADITIPSSVVFVGF 349
            +LL L GV HG  LI TC +LQAAF  TQT DV  EI P  DIEC T+TNMTM SNTLT++SSE+L  FF ++ L  VR  VTNGAEL+WET+V F G  EE E   DGGAVFVG GSTVHFLN++EM D+ IINERD DSDFA FVRSGGCVWT G F VDG A FT C+ITGAGESPPGPGGAIYVG TGSV FN  V+I++TFITDDFGG GG IYNLG+V I G +RFE++ AS G AIYNG  AEF F   A+AFFRD+ NRD+ GS L NLG FEFSGPALFV+A+APVIVA + S+T LS +SAFW  D+   +A+S    AD TIP+SVVFVGF
Sbjct:   10 SLLFLVGVAHG--LIETCEDLQAAFNLTQTQDVIDEIHPFQDIECETFTNMTMTSNTLTLNSSENLDNFFGSSSLTNVRLVVTNGAELIWETHVNFIG-DEEVELMVDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSDFASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISASSGVAIYNGEGAEFYFTNDASAFFRDLNNRDSVGSGLTNLGYFEFSGPALFVEADAPVIVATETSQTILSENSAFWTFDEEFGEALSVDEAADFTIPASVVFVGF 348          
BLAST of mRNA_S-firma_F_contig10642.873.1 vs. uniprot
Match: D7G0Q4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Q4_ECTSI)

HSP 1 Score: 413 bits (1062), Expect = 2.520e-141
Identity = 228/352 (64.77%), Postives = 271/352 (76.99%), Query Frame = 0
Query:    1 KFFSVAAALLLLPGVCHGQQLITTCAELQAAFEQTQTGDVNVEISPAADIECATYTNMTMNSNTLTVSSSEDLSIFFATTLLRRVRFEVTNGAELVWETNVWFDGVGEEEEQNN-DGGAVFVGTGSTVHFLNNVEMRDVYIINERDGDSDFAIFVRSGGCVWTNGEFRVDGNAVFTTCEITGAGESPPGPGGAIYVGETGSVLFNGDVSITDTFITDDFGGDGGAIYNLGKVDILGTARFEELRASEGGAIYNGVDAEFIFGTGATAFFRDVGNRDAQGSALYNLGVFEFSGPALFVDAEAPVIVAVDGSETTLSADSAFW--DLDDSGAQAISAGATADITIPSSVVFVGF 349
            K FS + ALL++PGV  G  LI TC +LQAAFE TQT DV  EIS   DIEC  +TNMTM SNTLT++S+EDLSI   +T L  VR EVTNGA+LVWET+V+F  +G+EE +NN +GG VFVG GSTV FLN+V++RDV I NERDGDSD A+FVR GGCVWT G FRVDG A FT+C I G GESPPG GGA++V  TGSVLFN  V+I+DTFIT+D GGDGG I+NLGKV+I G +RFEEL A  G AI+NG DA F F  GA+AFFRD+ NRD++GSAL NLG F+FSGP LFVDAEAPVIVA +GS T +S DSAFW  + DD   +AIS   +A+++IP SV FVGF
Sbjct:    4 KLFS-SLALLVIPGVARG--LIETCEDLQAAFELTQTQDVVDEISTFGDIECPMFTNMTMTSNTLTLNSAEDLSITSGSTSLINVRLEVTNGAKLVWETSVFF--LGDEEVENNVNGGGVFVGEGSTVRFLNDVQIRDVRITNERDGDSDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIGTGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPVLFVDAEAPVIVATEGSTTIISRDSAFWMFENDDVTGEAISVADSAEVSIPGSVSFVGF 350          
BLAST of mRNA_S-firma_F_contig10642.873.1 vs. uniprot
Match: D7G1Q9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q9_ECTSI)

HSP 1 Score: 397 bits (1019), Expect = 3.100e-135
Identity = 221/342 (64.62%), Postives = 245/342 (71.64%), Query Frame = 0
Query:    8 ALLLLPGVCHGQQLITTCAELQAAFEQTQTGDVNVEISPAADIECATYTNMTMNSNTLTVSSSEDLSIFFATTLLRRVRFEVTNGAELVWETNVWFDGVGEEEEQNNDGGAVFVGTGSTVHFLNNVEMRDVYIINERDGDSDFAIFVRSGGCVWTNGEFRVDGNAVFTTCEITGAGESPPGPGGAIYVGETGSVLFNGDVSITDTFITDDFGGDGGAIYNLGKVDILGTARFEELRASEGGAIYNGVDAEFIFGTGATAFFRDVGNRDAQGSALYNLGVFEFSGPALFVDAEAPVIVAVDGSETTLSADSAFWDLDDSGAQAISAGATADITIPSSVVFVGF 349
            ALLL+PG CHG  LI TC +L AAFEQTQT DV VE+ P ADIEC T+TNMTM SNTLT                            L WETNV F+G  EE E   DGGAV+VG GSTV FLN+V+MRDV IINERD DSDFA FVRSGGCVWT G FRVDG A FT C+I GAGESPPGPGGA+YVGETGSVLFN  V+IT+T ITDDFGG GG IYNLGKV+I G +RFEE+ AS G AIYNG  A F F  GA AFFRD+ NRD++GSAL NLG F+FSGPA F DAE PVIVA+D SET LS DSAFW  D+S   A++    AD T+P SV FVGF
Sbjct:   10 ALLLMPGTCHG--LIETCDDLLAAFEQTQTEDVVVEMHPFADIECDTFTNMTMTSNTLT----------------------------LFWETNVIFEG-DEEAELMVDGGAVYVGEGSTVRFLNDVQMRDVVIINERDEDSDFASFVRSGGCVWTAGYFRVDGEATFTGCDIIGAGESPPGPGGAVYVGETGSVLFNEGVTITETSITDDFGGKGGGIYNLGKVNIKGDSRFEEISASAGVAIYNGEGATFNFRNGAGAFFRDLNNRDSEGSALVNLGFFKFSGPAFFFDAELPVIVAMDNSETILSEDSAFWTWDESPGDALTVNEGADFTLPDSVTFVGF 320          
BLAST of mRNA_S-firma_F_contig10642.873.1 vs. uniprot
Match: D7G2Y5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y5_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 5.640e-79
Identity = 153/315 (48.57%), Postives = 198/315 (62.86%), Query Frame = 0
Query:    6 AAALLLLPG-VCHGQQLITTCAELQAAFEQTQTGDVNVEISPAADIECATYTNMTMNSNTLTVSSSEDLSIFFATTLLRRVRFEVTNGAELVWETNVWFDGVGEEEEQNNDGGAVFVGTGSTVHFLNNVEMRDVYIINERDGDSDFAIFVRSGGCVWTNGEFRVDGNAVFTTCEITGAGESPPGPGGAIYVGETGSVLFNGDVSITDTFITDDFGGDGGAIYNLGKVDILGTARFEELRASEGGAIYNGVDAEFIFGTGATAFFRDVGNRDAQGSALYNLGVFEFSGPALFVDAEAPVIVAVDGSETTLSADSAF 319
            AAALLL+ G VC GQ  + TC +L  AF  T + DV VEI P  DI C ++T M+M++N+LTV + +  S    +  L  VRFEVT+GA+L+W     F G    E Q+ +GGAV+VG GS+  F + +   +V + +  +  SDFA +   GGCV+ +G FRV+G+A F  CE +G GES PGPGG +YVGETGSVLF G+V++ D  I DD G +GG IYNLGKV+I G A F+ LRA  GGAI+NG  AEF F  GATA F D  + D  G A++N G F+ SGPA  V+  AP  V      T LS  S F
Sbjct:    9 AAALLLVSGSVCQGQ--LETCQDLLDAFALTASQDVVVEIQPGQDITCDSFTTMSMSANSLTVMTPDGQS---GSVGLNEVRFEVTDGAKLLWYPGASFTGT---EYQDVNGGAVYVGEGSSARFYDTLTTSEVGVRSVPEEGSDFASYQLIGGCVYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNAVFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGIGGAVFNAGYFKLSGPAEVVECRAPTFVVGSSGYTRLSEGSVF 315          
BLAST of mRNA_S-firma_F_contig10642.873.1 vs. uniprot
Match: A0A6H5JYQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ0_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 5.750e-75
Identity = 153/319 (47.96%), Postives = 198/319 (62.07%), Query Frame = 0
Query:    6 AAALLLLPG-VCHGQQLITTCAELQAAFEQTQTGDVNVEISPAADIECATYTNMTMNSNTLTVSSSEDLSIFFATTLLRRVRFEVTNGAELVWETNVWFDGVGEEEEQNNDGGAVFVGTGSTVHFLNNVEMRDVYIINERDGDSDFAIFVRSGGCV----WTNGEFRVDGNAVFTTCEITGAGESPPGPGGAIYVGETGSVLFNGDVSITDTFITDDFGGDGGAIYNLGKVDILGTARFEELRASEGGAIYNGVDAEFIFGTGATAFFRDVGNRDAQGSALYNLGVFEFSGPALFVDAEAPVIVAVDGSETTLSADSAF 319
            AAALLL+ G VC GQ  + TC +L  AF  T + DV VEI P  DI C  +T M+M++N+LTV++++  S    +  L  VRFEVT+GA+L W     F    E + Q+ +GGAV+VG GST  F + +   +V + +  +  SDFA +   GGCV    + +G FRV+G+A F  CE +G GES PGPGG +YVGETGSVLF G+V++ D  I DD G +GG IYNLGKV+I G A F+ LRA  GGAI+NG  AEF F  GATA F D  + D  G A++N G F+ SGPA  V+  AP  V      T LS  S F
Sbjct:  239 AAALLLVSGSVCRGQ--VETCQDLLDAFALTASQDVVVEIQPGQDITCDNFTTMSMSANSLTVTATDGQS---GSVGLNEVRFEVTDGAKLFWHPGASFT---ETDYQDVNGGAVYVGEGSTARFYDTLTTSEVGVRSVPEEGSDFASYELIGGCVRAYTYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNALFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGTGGAVFNAGYFKLSGPAEVVECRAPTFVVGSSGYTRLSEGSVF 549          
BLAST of mRNA_S-firma_F_contig10642.873.1 vs. uniprot
Match: D8LG63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG63_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 1.350e-63
Identity = 107/167 (64.07%), Postives = 127/167 (76.05%), Query Frame = 0
Query:  135 MRDVYIINERDGDSDFAIFVRSGGCVWTNGEFRVDGNAVFTTCEITGAGESPPGPGGAIYVGETGSVLFNGDVSITDTFITDDFGGDGGAIYNLGKVDILGTARFEELRASEGGAIYNGVDAEFIFGTGATAFFRDVGNRDAQGSALYNLGVFEFSGPALFVDAEAP 301
            MRDV IINE D DSD+A +  SGGCV T G F V+G+A FT CE  GAGES PGPGGAI+V ETGSV F+  V+I +T ITDDFGG GG IYNLG+V++ G +RFE++ AS G A+YNG  A+  F  GATA FRD+ NRD+ GSALY LG FEFSGPALFV+A+ P
Sbjct:    1 MRDVGIINETDEDSDYASYQHSGGCVRTAGTFTVNGDATFTGCESVGAGESAPGPGGAIFVSETGSVSFSEGVTIMETSITDDFGGQGGGIYNLGEVNVAGGSRFEDISASSGVAVYNGEGAQLRFTNGATACFRDLSNRDSVGSALYYLGYFEFSGPALFVEADTP 167          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10642.873.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JCE5_9PHAE3.080e-14967.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGT1_ECTSI6.380e-14466.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0Q4_ECTSI2.520e-14164.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1Q9_ECTSI3.100e-13564.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2Y5_ECTSI5.640e-7948.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYQ0_9PHAE5.750e-7547.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG63_ECTSI1.350e-6364.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..354
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.892

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10642contigS-firma_F_contig10642:3934..4998 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10642.873.1mRNA_S-firma_F_contig10642.873.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10642 3934..4998 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10642.873.1 ID=prot_S-firma_F_contig10642.873.1|Name=mRNA_S-firma_F_contig10642.873.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=355bp
KFFSVAAALLLLPGVCHGQQLITTCAELQAAFEQTQTGDVNVEISPAADI
ECATYTNMTMNSNTLTVSSSEDLSIFFATTLLRRVRFEVTNGAELVWETN
VWFDGVGEEEEQNNDGGAVFVGTGSTVHFLNNVEMRDVYIINERDGDSDF
AIFVRSGGCVWTNGEFRVDGNAVFTTCEITGAGESPPGPGGAIYVGETGS
VLFNGDVSITDTFITDDFGGDGGAIYNLGKVDILGTARFEELRASEGGAI
YNGVDAEFIFGTGATAFFRDVGNRDAQGSALYNLGVFEFSGPALFVDAEA
PVIVAVDGSETTLSADSAFWDLDDSGAQAISAGATADITIPSSVVFVGFA
EPSS*
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