prot_S-firma_F_contig1061.835.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1061.835.1
Unique Nameprot_S-firma_F_contig1061.835.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length341
Homology
BLAST of mRNA_S-firma_F_contig1061.835.1 vs. uniprot
Match: A0A6H5JJW9_9PHAE (Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJW9_9PHAE)

HSP 1 Score: 409 bits (1051), Expect = 6.500e-140
Identity = 236/349 (67.62%), Postives = 264/349 (75.64%), Query Frame = 0
Query:    1 MALRTAAAAIKRRSPRLSAEVNRSLSLHNGGSGAFTAAPGGTPRTSLSKGGRHALVVKTRGRSSAPSSPSLAAATSPAGRRDFGTDTPATKRPRRVSKPKGVVAAGVKKNACSSLGRTREERKRGEGFDVVIGVDEAGRGPFAGPVVAAACFIPPDIDIGGIQDSKKVAQHSDREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTNCALEVCSKAA--------KTQTKKSKSSKPKPFILVDGNFTPAGL--AEVDSQYVIGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPVYGFERHKGYGTRAHSDAIREHGMVEIHRRSFLKKMEASGGKLSENK 339
            MA++T   A  RRSPRL+AEV R     +G SGAF A P   PR  L    R A+    R +SS+P    LAA     G    G D    +R RRVSKPKGV A+ V+K   S+LGRTRE RK  EGFD VIG+DEAGRGPFAGPVVAAAC IPPD++I GIQDSKK+ QHSDRE L+KELTE+PGVIWATSEVGS RIDEINILEATKEAMTNC LEVCSK+         KT  KK+ S K KPF+LVDGNFTP GL  A+V+++ V+GGDGLEYCIAAASIIAKVTRDRLMIEFGERWPV+GFERHKGYGT AH DAIREHGMVEIHRRSFLK ME+SGGKL+E K
Sbjct:   16 MAIQTRTTAA-RRSPRLAAEVRR----RHGSSGAFNAGPC-PPREPLGVSNRRAIATSARSKSSSP----LAA-----GAESSGADVRPKRRIRRVSKPKGVTAS-VQKKTKSTLGRTRENRKLAEGFDAVIGLDEAGRGPFAGPVVAAACMIPPDVNILGIQDSKKITQHSDRETLFKELTETPGVIWATSEVGSSRIDEINILEATKEAMTNCVLEVCSKSVEPSANKGMKTNWKKNASDK-KPFVLVDGNFTPPGLGDAKVEAECVVGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPVFGFERHKGYGTAAHRDAIREHGMVEIHRRSFLKNMESSGGKLAEYK 347          
BLAST of mRNA_S-firma_F_contig1061.835.1 vs. uniprot
Match: D8RCY3_SELML (Ribonuclease (Fragment) n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RCY3_SELML)

HSP 1 Score: 198 bits (503), Expect = 3.370e-59
Identity = 104/194 (53.61%), Postives = 132/194 (68.04%), Query Frame = 0
Query:  131 VIGVDEAGRGPFAGPVVAAACFIPPDIDIGGIQDSKKVAQHSDREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTNCALEVCSKAAKTQTKKSKSSKPKPFILVDGNFTPAGLAEVDSQYVIGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPVYGFERHKGYGTRAHSDAIREHGMVEIHRRSF 324
            VIGVDEAGRGP AGPVVAAAC IP D+DI GI DSKK+     RE LY ++T +PGV ++   V + RIDEINIL+AT EAM  C  E+                  P+IL+DGN  P GL+   ++ V+ GD   + IAAASI+AKVTRDRLM ++ +RWP+YGF+ HKGYGT +H+ A+ +HG  +IHRRSF
Sbjct:    3 VIGVDEAGRGPLAGPVVAAACIIPEDVDIQGIDDSKKLTAEK-REQLYSQITSTPGVRFSICVVDAPRIDEINILQATMEAMETCVEELTGNGRDHP----------PYILIDGNRIPGGLSGKHARSVVKGDAESHVIAAASILAKVTRDRLMEDYDKRWPLYGFKDHKGYGTASHTAALLKHGPCDIHRRSF 185          
BLAST of mRNA_S-firma_F_contig1061.835.1 vs. uniprot
Match: A0A225WDA0_9STRA (Ribonuclease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDA0_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.170e-58
Identity = 121/245 (49.39%), Postives = 154/245 (62.86%), Query Frame = 0
Query:   88 PATKRPRRVSKPKGVVAAGVKKNACSSLGRTREERKRGEGFDVVIGVDEAGRGPFAGPVVAAACFIPPDIDIGGIQDSKKVAQHSDREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTNCALEVCSKAAKTQTKKSKSSKPKPFILVDGNFTPAGLAEVDSQYVIGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPVYGFERHKGYGTRAHSDAIREHGMVEIHRRSF--LKKMEA 330
            P   R  R SKPK   A   +K + S+L R  E R   +G+  VIGVDEAGRGP AGPVVAAAC +P D+ I G+ DSKK+++   RE L++ LT  P + +A     ++RIDEINIL+A+ E+MT    EV  K  + +T          F+LVDGN  P  L E+ ++ V+ GD   Y IAAASIIAKVTRDRLM E+ E++P YG  +HKGY TRAH  AI +HG  EIHR +F  LK  EA
Sbjct:   37 PVPSRAPRASKPK-KTAKKDEKQSISTLSRVFETRYEAKGYTTVIGVDEAGRGPLAGPVVAAACHVPLDVTIEGVDDSKKISEPQ-REELFELLTNHPKITYAVHVNSAQRIDEINILQASLESMTKSVNEVAEKLQQDKT----------FVLVDGNKLPPTL-ELPAEAVVKGDSKVYSIAAASIIAKVTRDRLMREYDEKFPQYGLAQHKGYPTRAHVAAIAKHGPCEIHRMTFAPLKPKEA 268          
BLAST of mRNA_S-firma_F_contig1061.835.1 vs. uniprot
Match: G4Z1P2_PHYSP (Ribonuclease n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z1P2_PHYSP)

HSP 1 Score: 196 bits (498), Expect = 1.230e-57
Identity = 115/231 (49.78%), Postives = 148/231 (64.07%), Query Frame = 0
Query:  111 ACSSLGRTREERKRGEGFDVVIGVDEAGRGPFAGPVVAAACFIPPDIDIGGIQDSKKVAQHSDREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTNCALEVCSKAAKTQTKKSKSSKPKPFILVDGNFTPAGLAEVDSQYVIGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPVYGFERHKGYGTRAHSDAIREHGMVEIHRRSF--LKKMEASGGKLSENK 339
            + S+L RT E R + +G+  VIGVDEAGRGP AGPVVAAAC +P D+ I G+ DSKK+++   REAL++ LT  P + +A     ++RIDEINIL+A+ E+MT  A EV  +  +T          K F+LVDGN  P  L E+ ++ V+ GD   Y IAAASIIAKVTRDRLM E+ E++P YG  +HKGY TR H  AI +HG   IHR +F  LK  EA   K    K
Sbjct:   32 STSTLARTFETRYQAKGYTTVIGVDEAGRGPLAGPVVAAACHVPLDVTIEGVDDSKKISEPQ-REALFELLTNHPSITYAVHVNSAQRIDEINILQASLESMTKSANEVAERLQQTD---------KTFVLVDGNKLPPTL-ELPAEAVVKGDSKVYSIAAASIIAKVTRDRLMREYDEQYPQYGLAKHKGYPTRDHVAAIAKHGPCAIHRMTFAPLKPKEAPKPKAKGKK 251          
BLAST of mRNA_S-firma_F_contig1061.835.1 vs. uniprot
Match: W2QYI7_PHYPN (Ribonuclease n=12 Tax=Phytophthora TaxID=4783 RepID=W2QYI7_PHYPN)

HSP 1 Score: 191 bits (486), Expect = 1.710e-55
Identity = 114/229 (49.78%), Postives = 142/229 (62.01%), Query Frame = 0
Query:  113 SSLGRTREERKRGEGFDVVIGVDEAGRGPFAGPVVAAACFIPPDIDIGGIQDSKKVAQHSDREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTNCALEVCSKAAKTQTKKSKSSKPKPFILVDGNFTPAGLAEVDSQYVIGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPVYGFERHKGYGTRAHSDAIREHGMVEIHRRSF--LKKMEASGGKLSENK 339
            S+L R  E R   +G+  VIGVDEAGRGP  GPVVAAAC +P D+ I G+ DSKK+ +   REAL++ LT  P + +A     ++RIDEINIL+A+ E+MT    EV  +            K K F+LVDGN  P  L E+ ++ VI GD   Y IAAASIIAKVTRDRLM E+ E++P YG  +HKGY TR H  AI +HG  EIHR +F  LK  EA   K    K
Sbjct:   61 STLSRIFETRYEAKGYTTVIGVDEAGRGPLVGPVVAAACHVPLDVTIPGVDDSKKILEPQ-REALFELLTTHPSITYAVHVNSAQRIDEINILQASLESMTKSVNEVAERL---------QQKDKTFVLVDGNKLPPTL-ELPAEAVIKGDSKVYSIAAASIIAKVTRDRLMREYDEKFPQYGLAQHKGYPTRGHVAAIAKHGPCEIHRMTFAPLKPKEAPKPKAKGKK 278          
BLAST of mRNA_S-firma_F_contig1061.835.1 vs. uniprot
Match: A0A2K1L292_PHYPA (Ribonuclease n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L292_PHYPA)

HSP 1 Score: 193 bits (490), Expect = 2.080e-55
Identity = 101/198 (51.01%), Postives = 134/198 (67.68%), Query Frame = 0
Query:  127 GFDVVIGVDEAGRGPFAGPVVAAACFIPPDIDIGGIQDSKKVAQHSDREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTNCALEVCSKAAKTQTKKSKSSKPKPFILVDGNFTPAGLAEVDSQYVIGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPVYGFERHKGYGTRAHSDAIREHGMVEIHRRSF 324
            GF  V GVDEAGRGP AGPVVAAAC IP    I G+ DSKK+ + + RE LY ++  +PGV +A   V + +IDEINIL+AT  AM+ C  ++         +K +  +   +IL+DGN  P  L++ ++Q+VI GD   + IAAASI+AKVTRDR+M+++  RWPVYGF+ HKGYGT AH  A+  HG  +IHRRSF
Sbjct:  140 GFRNVAGVDEAGRGPLAGPVVAAACIIPASATIPGVDDSKKLTE-AQREELYAQIVATPGVAYAIHVVDAAKIDEINILQATLLAMSTCVKKL---------RKERGGEAPDYILIDGNRIPDELSKEEAQFVIKGDAECHVIAAASILAKVTRDRMMVDYDRRWPVYGFKAHKGYGTAAHIGALLNHGPCDIHRRSF 327          
BLAST of mRNA_S-firma_F_contig1061.835.1 vs. uniprot
Match: A0A1Y1I4C1_KLENI (Ribonuclease n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I4C1_KLENI)

HSP 1 Score: 188 bits (477), Expect = 1.660e-54
Identity = 107/208 (51.44%), Postives = 131/208 (62.98%), Query Frame = 0
Query:  117 RTREERKRGEGFDVVIGVDEAGRGPFAGPVVAAACFIPPDIDIGGIQDSKKVAQHSDREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTNCALEVCSKAAKTQTKKSKSSKPKPFILVDGNFTPAGLAEVDSQYVIGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPVYGFERHKGYGTRAHSDAIREHGMVEIHRRSF 324
            R  E  +   GF  V GVDEAGRGP AGPVVAAAC +PP+ +I G+ DSKKV++ ++R+ LY  +T +PGV +A S V    ID+INILEA   AM N    V +                 F LVDGN  P  LA   S+ ++GGD L   IAAASIIAKVTRDRLM EF E+WP YGF+ HKGYGT AH + ++  G V IHRR+F
Sbjct:   42 RDAEALQWAAGFKRVAGVDEAGRGPLAGPVVAAACILPPNFEIPGVDDSKKVSE-ANRDRLYDIITNAPGVEFAVSVVDVETIDQINILEAAMLAMANAVKLVRA----------------DFALVDGNRIPKQLAASVSKAIVGGDALSTSIAAASIIAKVTRDRLMCEFHEQWPEYGFKAHKGYGTAAHMEVLKRLGPVVIHRRTF 232          
BLAST of mRNA_S-firma_F_contig1061.835.1 vs. uniprot
Match: A0A0P1ACX4_PLAHL (Ribonuclease n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACX4_PLAHL)

HSP 1 Score: 187 bits (474), Expect = 6.450e-54
Identity = 114/248 (45.97%), Postives = 154/248 (62.10%), Query Frame = 0
Query:   92 RPRRVSKPKGVVAAGVKKNACS--SLGRTREERKRGEGFDVVIGVDEAGRGPFAGPVVAAACFIPPDIDIGGIQDSKKVAQHSDREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTNCALEVCSKAAKTQTKKSKSSKPKPFILVDGNFTPAGLAEVDSQYVIGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPVYGFERHKGYGTRAHSDAIREHGMVEIHRRSF--LKKMEASGGKL 335
            R RR+ KPK  +   + K A    +L R  E R + +G+  VIGVDEAGRGP AGPVVAAAC +P D+ I G+ DSKK+ Q   REAL++ LT  P + +A     ++RIDEINIL+A+ EAMT    +V  +  +         K   F+LVDGN  P  L ++ ++ V+ GD   + IAAASIIAKVTRDR+M  + +++P YG  +HKGY TRAH  AI +HG  +IHR +F  LK  + S  K+
Sbjct:   32 RDRRIPKPKKAL---IDKLAVPPRTLSRQFETRYKAKGYSTVIGVDEAGRGPLAGPVVAAACHVPLDVVIEGVDDSKKILQER-REALFELLTTHPSITYAVHVNSAQRIDEINILQASLEAMTKAVNDVTKRLLQ---------KDNIFVLVDGNKLPPTL-DLPAEAVVKGDSKVFSIAAASIIAKVTRDRIMRNYDDQYPQYGLAQHKGYPTRAHVAAIAKHGPCKIHRMTFAPLKPKDMSKSKI 265          
BLAST of mRNA_S-firma_F_contig1061.835.1 vs. uniprot
Match: H3G7Z9_PHYRM (Ribonuclease n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7Z9_PHYRM)

HSP 1 Score: 184 bits (466), Expect = 1.370e-53
Identity = 103/205 (50.24%), Postives = 132/205 (64.39%), Query Frame = 0
Query:  120 EERKRGEGFDVVIGVDEAGRGPFAGPVVAAACFIPPDIDIGGIQDSKKVAQHSDREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTNCALEVCSKAAKTQTKKSKSSKPKPFILVDGNFTPAGLAEVDSQYVIGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPVYGFERHKGYGTRAHSDAIREHGMVEIHRRSF 324
            E R   +G+  VIGVDEAGRGP AGPVVAAAC +P D+ + G+ DSKK+ +   REAL++ LT  P + +A     ++RIDEINIL+A+ E+M     EV  +            K K F+LVDGN  P  L E+ ++ V+ GD   Y IAAASIIAKVTRDRLM ++ E++P YG  +HKGY TRAH  AI EHG   IHR +F
Sbjct:    2 EARCEAKGYTTVIGVDEAGRGPLAGPVVAAACHVPLDVTLDGVDDSKKILEPQ-REALFELLTNHPSITYAVHVNSAQRIDEINILQASLESMAYSVNEVAERL---------QQKDKTFVLVDGNKLPPML-ELPAEAVVKGDSKVYSIAAASIIAKVTRDRLMRQYDEQYPQYGLAQHKGYPTRAHVAAIAEHGACAIHRMTF 195          
BLAST of mRNA_S-firma_F_contig1061.835.1 vs. uniprot
Match: A0A2R6XCN5_MARPO (Ribonuclease n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XCN5_MARPO)

HSP 1 Score: 186 bits (472), Expect = 4.750e-53
Identity = 104/199 (52.26%), Postives = 138/199 (69.35%), Query Frame = 0
Query:  127 GFDVVIGVDEAGRGPFAGPVVAAACFIPPDIDIGGIQDSKKVAQHSDREALYKELTESPGVIWATSEVGSRRIDEINILEATKEAMTNCALEVCSKAAKTQTKKSKSSKPKP-FILVDGNFTPAGLAEVDSQYVIGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPVYGFERHKGYGTRAHSDAIREHGMVEIHRRSF 324
            GF  V GVDEAGRGP AGPVVAAAC IP  ++I GI DSKK+ + + RE LY+++T +PG+ +A   V +  IDE+NIL+AT +AM+ C ++V S A++          P+P FILVDGN  P G  E +S+ V+ GD +   IAAASI+AKVTRDRLM+ + + WP YGF+ HKGYGT  H  A+ ++G  +IHRRSF
Sbjct:  110 GFQHVAGVDEAGRGPLAGPVVAAACIIPSSVNIEGIDDSKKLTE-AKREELYEKITSTPGISYAIHVVDAAIIDEVNILQATMQAMSAC-VQVLSCASQEN--------PRPDFILVDGNRLPDGFPE-NSRSVVKGDAVCQVIAAASILAKVTRDRLMLSYDKTWPNYGFKAHKGYGTATHMAALLKYGPCDIHRRSF 297          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1061.835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJW9_9PHAE6.500e-14067.62Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D8RCY3_SELML3.370e-5953.61Ribonuclease (Fragment) n=5 Tax=Selaginella moelle... [more]
A0A225WDA0_9STRA1.170e-5849.39Ribonuclease n=1 Tax=Phytophthora megakarya TaxID=... [more]
G4Z1P2_PHYSP1.230e-5749.78Ribonuclease n=4 Tax=Phytophthora TaxID=4783 RepID... [more]
W2QYI7_PHYPN1.710e-5549.78Ribonuclease n=12 Tax=Phytophthora TaxID=4783 RepI... [more]
A0A2K1L292_PHYPA2.080e-5551.01Ribonuclease n=1 Tax=Physcomitrium patens TaxID=32... [more]
A0A1Y1I4C1_KLENI1.660e-5451.44Ribonuclease n=1 Tax=Klebsormidium nitens TaxID=10... [more]
A0A0P1ACX4_PLAHL6.450e-5445.97Ribonuclease n=1 Tax=Plasmopara halstedii TaxID=47... [more]
H3G7Z9_PHYRM1.370e-5350.24Ribonuclease n=1 Tax=Phytophthora ramorum TaxID=16... [more]
A0A2R6XCN5_MARPO4.750e-5352.26Ribonuclease n=2 Tax=Marchantia polymorpha TaxID=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024567Ribonuclease HII/HIII domainPFAMPF01351RNase_HIIcoord: 132..325
e-value: 1.3E-29
score: 103.4
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 110..339
e-value: 1.1E-62
score: 213.5
IPR022898Ribonuclease HIIPANTHERPTHR10954:SF18RIBONUCLEASE HIIcoord: 107..330
IPR001352Ribonuclease HII/HIIIPANTHERPTHR10954RIBONUCLEASE H2 SUBUNIT Acoord: 107..330
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 126..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1061contigS-firma_F_contig1061:1170..4915 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1061.835.1mRNA_S-firma_F_contig1061.835.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1061 1149..5538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1061.835.1 ID=prot_S-firma_F_contig1061.835.1|Name=mRNA_S-firma_F_contig1061.835.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=341bp
MALRTAAAAIKRRSPRLSAEVNRSLSLHNGGSGAFTAAPGGTPRTSLSKG
GRHALVVKTRGRSSAPSSPSLAAATSPAGRRDFGTDTPATKRPRRVSKPK
GVVAAGVKKNACSSLGRTREERKRGEGFDVVIGVDEAGRGPFAGPVVAAA
CFIPPDIDIGGIQDSKKVAQHSDREALYKELTESPGVIWATSEVGSRRID
EINILEATKEAMTNCALEVCSKAAKTQTKKSKSSKPKPFILVDGNFTPAG
LAEVDSQYVIGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPVYGFERHK
GYGTRAHSDAIREHGMVEIHRRSFLKKMEASGGKLSENKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR001352RNase_HII/HIII
IPR022898RNase_HII
IPR036397RNaseH_sf
IPR024567RNase_HII/HIII_dom