prot_S-firma_F_contig106.814.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig106.814.1
Unique Nameprot_S-firma_F_contig106.814.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length196
Homology
BLAST of mRNA_S-firma_F_contig106.814.1 vs. uniprot
Match: D8LBC1_ECTSI (Uncharacterized protein n=3 Tax=Eukaryota TaxID=2759 RepID=D8LBC1_ECTSI)

HSP 1 Score: 376 bits (966), Expect = 8.320e-132
Identity = 191/194 (98.45%), Postives = 194/194 (100.00%), Query Frame = 0
Query:    1 MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMARFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDFSITSPYGQGRPGRVARKRAASKAAAGGDDGDESD 194
            MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRM+RFGLLGEDE+ELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDFSITSPYGQGRPGRVARKRAASKAAAGGDDG+ESD
Sbjct:    1 MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDEKELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDFSITSPYGQGRPGRVARKRAASKAAAGGDDGEESD 194          
BLAST of mRNA_S-firma_F_contig106.814.1 vs. uniprot
Match: A0A836CIZ7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ7_9STRA)

HSP 1 Score: 328 bits (842), Expect = 6.410e-113
Identity = 161/186 (86.56%), Postives = 179/186 (96.24%), Query Frame = 0
Query:    1 MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMARFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDFSITSPYGQGRPGRVARKRAASKAAAG 186
            MPK+G++RNYRKT+KTPRRP+EKERLD ELKLCGEYGLRCKREIWRVQ+ALAKIRKAAR+LLTLD KDPKRLFEGPALLRRMARFGLL E+E+ELDFVLQL+T+K+LERRLQTKVFKQGLAKSIHHARVLI+ RHIRVGKQLVN+P F VR+DSEKHIDF++TSP+GQGRPGRVARKRAASKAA G
Sbjct:    1 MPKIGMYRNYRKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYALAKIRKAARELLTLDAKDPKRLFEGPALLRRMARFGLLTEEEKELDFVLQLSTQKLLERRLQTKVFKQGLAKSIHHARVLIRQRHIRVGKQLVNIPSFTVRVDSEKHIDFALTSPFGQGRPGRVARKRAASKAAGG 186          
BLAST of mRNA_S-firma_F_contig106.814.1 vs. uniprot
Match: A0A7S2V9P4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9P4_9STRA)

HSP 1 Score: 326 bits (835), Expect = 7.740e-112
Identity = 164/191 (85.86%), Postives = 178/191 (93.19%), Query Frame = 0
Query:    1 MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMARFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDFSITSPYGQGRPGRVARKRAASKAAAGGDDGD 191
            MPK+   RN+RKT KTPRRPYEKERLD ELKLCGEYGLRCKREIWRVQ ALAKIRKAAR+LLTL+ KDP+RLFEGPALLRRM+R+GLL +DE+ELDFVLQL+T+K+LERRLQTKVFKQGLAKSIHHARVLIK RHIRVGKQLVNVP F+VRMDSEKHIDF+ITSPYG GRPGRVARKRAA KAAAGGDD D
Sbjct:    1 MPKISARRNHRKTSKTPRRPYEKERLDQELKLCGEYGLRCKREIWRVQLALAKIRKAARELLTLEPKDPRRLFEGPALLRRMSRYGLLMDDEKELDFVLQLSTQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQLVNVPSFLVRMDSEKHIDFAITSPYGLGRPGRVARKRAAQKAAAGGDDED 191          
BLAST of mRNA_S-firma_F_contig106.814.1 vs. uniprot
Match: A0A7S0TCI6_9STRA (Hypothetical protein n=2 Tax=Pelagophyceae TaxID=35675 RepID=A0A7S0TCI6_9STRA)

HSP 1 Score: 318 bits (815), Expect = 9.260e-109
Identity = 164/196 (83.67%), Postives = 179/196 (91.33%), Query Frame = 0
Query:    1 MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMARFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDFSITSPYGQGRPGRVARKRAASKAAA--GGDDGDESD 194
            MPKV   RNY KT KTPRRP+EKER+D ELKLCGEYGLRCKRE+WRVQFALAKIRKAAR+LLTLD KDPKRLFEG ALLRRMAR+GLL E E +LD +LQ+TT+K+LERRLQTKVFKQGLAKSIHHARVLIK RHIRVGKQ+VNVP FMVR+DSEKHIDF+ITSPYGQGRPGRVARKRAA+KAAA  GGD G+ESD
Sbjct:    1 MPKVRFLRNYSKTSKTPRRPFEKERIDGELKLCGEYGLRCKRELWRVQFALAKIRKAARELLTLDPKDPKRLFEGAALLRRMARYGLLDETELDLDAILQMTTQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQVVNVPSFMVRVDSEKHIDFAITSPYGQGRPGRVARKRAAAKAAADGGGDAGEESD 196          
BLAST of mRNA_S-firma_F_contig106.814.1 vs. uniprot
Match: A0A3R7JV42_9STRA (Ribosomal_S4 domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A3R7JV42_9STRA)

HSP 1 Score: 306 bits (783), Expect = 1.210e-103
Identity = 151/187 (80.75%), Postives = 170/187 (90.91%), Query Frame = 0
Query:    1 MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMARFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDFSITSPYGQGRPGRVARKRAASKAAAGG 187
            MPK+  HRNYRKT++TP R +EKERLD ELKL GEYGLRCKREIWRVQ+AL+K+RKAAR+LLTLD KDPKRLFEG ALLRR+ RFG+L EDE ELDFVL+L  +K+LERRLQTKVFKQ LAKSIHHARVLIK RHIRVGKQLV+VP F+VRMDSEKHIDF++TSPYGQGRPGRVAR+RAA +AAAGG
Sbjct:    1 MPKISRHRNYRKTYRTPSRAFEKERLDQELKLLGEYGLRCKREIWRVQYALSKLRKAARELLTLDPKDPKRLFEGSALLRRLKRFGVLSEDENELDFVLRLNVQKLLERRLQTKVFKQNLAKSIHHARVLIKQRHIRVGKQLVDVPSFLVRMDSEKHIDFAVTSPYGQGRPGRVARRRAAQRAAAGG 187          
BLAST of mRNA_S-firma_F_contig106.814.1 vs. uniprot
Match: A0A3R6WW56_9STRA (Ribosomal_S4 domain-containing protein n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A3R6WW56_9STRA)

HSP 1 Score: 305 bits (781), Expect = 1.400e-103
Identity = 148/183 (80.87%), Postives = 167/183 (91.26%), Query Frame = 0
Query:    1 MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMARFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDFSITSPYGQGRPGRVARKRAASKA 183
            MPK+  HRNYRKT++TP R +EKERLD E+KL GEYGLRCKREIWRVQ+ LAK+RKAARQLLTLD KDPKRLFEGPAL+RR+ R+GLL +DE ELDFVLQ+ T+K+LERRLQTKVFKQGLAKSIHHAR LIK RHIRVG+QLV+VP FMVR+DSEKHIDFS+TSPYGQGRPGRVARKRAA +A
Sbjct:    1 MPKISRHRNYRKTYRTPSRAFEKERLDQEMKLLGEYGLRCKREIWRVQYTLAKLRKAARQLLTLDPKDPKRLFEGPALMRRLKRYGLLADDENELDFVLQMNTQKLLERRLQTKVFKQGLAKSIHHARTLIKQRHIRVGRQLVDVPSFMVRLDSEKHIDFSVTSPYGQGRPGRVARKRAAQRA 183          
BLAST of mRNA_S-firma_F_contig106.814.1 vs. uniprot
Match: A0A7S1BHT3_9STRA (Hypothetical protein n=5 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1BHT3_9STRA)

HSP 1 Score: 304 bits (779), Expect = 2.370e-103
Identity = 154/189 (81.48%), Postives = 170/189 (89.95%), Query Frame = 0
Query:    1 MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMARFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDFSITSPYGQGRPGRVARKRAASKAAAGGDD 189
            MP   +HRNYRKT KTPRRPYEKERLD+ELKL GEYGLRCKRE+WRVQFALAK+RKAAR LLTLD KDPKR+FEG ALLRRM+R+GLL EDE ELDFVLQL+T+K+LERRLQTKVFKQGLAKSIHHARVLI+ RHIRVG QLVNVP F VR  SEKH+DF+  SPYGQG PGRVARKRAA++AAAGGD+
Sbjct:    1 MPTNAMHRNYRKTSKTPRRPYEKERLDAELKLVGEYGLRCKREVWRVQFALAKLRKAARTLLTLDPKDPKRVFEGEALLRRMSRYGLLNEDELELDFVLQLSTQKILERRLQTKVFKQGLAKSIHHARVLIRQRHIRVGGQLVNVPSFNVRTSSEKHMDFATNSPYGQGPPGRVARKRAAARAAAGGDE 189          
BLAST of mRNA_S-firma_F_contig106.814.1 vs. uniprot
Match: A0A7S2BVT2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BVT2_9STRA)

HSP 1 Score: 303 bits (777), Expect = 5.310e-103
Identity = 158/196 (80.61%), Postives = 171/196 (87.24%), Query Frame = 0
Query:    1 MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMARFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDFSITSPYGQ-GRPGRVARKRAASKAAAGGDDGDESDE 195
            MP +   RNY  T KTPRR YEKERLD ELKLCGEYGLRCKREIWRVQ ALAKIRKAAR LLTLD KDPKRLFEGPALLR+M R+GLL E+E+ELDFVLQLTT+K+LERRLQTKVFKQGLAKSIHHARVLIK RHIRVGKQLVNVP F+VR+DSEKHI F+ TSPY   GR GRVARKRAA+KAA  GD+G+E DE
Sbjct:    1 MPSIAFKRNYSSTSKTPRRAYEKERLDQELKLCGEYGLRCKREIWRVQLALAKIRKAARDLLTLDVKDPKRLFEGPALLRKMVRYGLLSEEEKELDFVLQLTTQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQLVNVPSFLVRVDSEKHIQFATTSPYSDVGRQGRVARKRAAAKAA--GDEGEEDDE 194          
BLAST of mRNA_S-firma_F_contig106.814.1 vs. uniprot
Match: K0SZN6_THAOC (Uncharacterized protein n=8 Tax=Bacillariophyta TaxID=2836 RepID=K0SZN6_THAOC)

HSP 1 Score: 301 bits (771), Expect = 3.790e-102
Identity = 154/189 (81.48%), Postives = 167/189 (88.36%), Query Frame = 0
Query:    1 MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMARFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDFSITSPYGQGRPGRVARKRAASKAAAGGDD 189
            MP    HRNYRKT+KTPRRPYEKERLD+ELKL GEYGLRCKREIWRVQ+ALAK+RKAAR LLTLD KDPKR+FEG ALLRRM+R+GLL +DE ELDFVLQLTT+K+LERRLQTKVFKQGLAKSIHHARVLI+ RHI VG QLVNVP F VR  SEKHID S  SPYGQG PGRVA+KRAA+KAAAG DD
Sbjct:    1 MPTNAQHRNYRKTYKTPRRPYEKERLDAELKLVGEYGLRCKREIWRVQYALAKLRKAARVLLTLDPKDPKRIFEGAALLRRMSRYGLLADDELELDFVLQLTTQKLLERRLQTKVFKQGLAKSIHHARVLIRQRHISVGGQLVNVPSFNVRTSSEKHIDISANSPYGQGAPGRVAKKRAAAKAAAGEDD 189          
BLAST of mRNA_S-firma_F_contig106.814.1 vs. uniprot
Match: B8C1H2_THAPS (RS9, ribosomal protein 9 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1H2_THAPS)

HSP 1 Score: 301 bits (770), Expect = 5.390e-102
Identity = 154/189 (81.48%), Postives = 166/189 (87.83%), Query Frame = 0
Query:    1 MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMARFGLLGEDERELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDFSITSPYGQGRPGRVARKRAASKAAAGGDD 189
            MP    HRNYRKT+KTPRRPYEKERLD+ELKL GEYGLRCKREIWR Q+ALAK+RKAAR LLTLD KDPKR+FEG ALLRRM+R+GLL EDE ELDFVLQLTT+K+LERRLQTKVFKQGLAKSIHHARVLI+ RHI VG QLVNVP F VR  SEKHID S  SPYGQG PGRVA+KRAA+KAAAG DD
Sbjct:    1 MPTNAQHRNYRKTYKTPRRPYEKERLDAELKLVGEYGLRCKREIWRCQYALAKLRKAARTLLTLDPKDPKRIFEGTALLRRMSRYGLLAEDELELDFVLQLTTQKLLERRLQTKVFKQGLAKSIHHARVLIRQRHISVGGQLVNVPSFNVRTSSEKHIDISADSPYGQGAPGRVAKKRAAAKAAAGDDD 189          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig106.814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBC1_ECTSI8.320e-13298.45Uncharacterized protein n=3 Tax=Eukaryota TaxID=27... [more]
A0A836CIZ7_9STRA6.410e-11386.56Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A7S2V9P4_9STRA7.740e-11285.86Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0TCI6_9STRA9.260e-10983.67Hypothetical protein n=2 Tax=Pelagophyceae TaxID=3... [more]
A0A3R7JV42_9STRA1.210e-10380.75Ribosomal_S4 domain-containing protein n=4 Tax=Per... [more]
A0A3R6WW56_9STRA1.400e-10380.87Ribosomal_S4 domain-containing protein n=6 Tax=Sap... [more]
A0A7S1BHT3_9STRA2.370e-10381.48Hypothetical protein n=5 Tax=Bacillariophyta TaxID... [more]
A0A7S2BVT2_9STRA5.310e-10380.61Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
K0SZN6_THAOC3.790e-10281.48Uncharacterized protein n=8 Tax=Bacillariophyta Ta... [more]
B8C1H2_THAPS5.390e-10281.48RS9, ribosomal protein 9 n=1 Tax=Thalassiosira pse... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001912Ribosomal protein S4/S9, N-terminalSMARTSM01390Ribosomal_S4_2coord: 8..108
e-value: 9.7E-19
score: 78.3
IPR001912Ribosomal protein S4/S9, N-terminalPFAMPF00163Ribosomal_S4coord: 14..64
e-value: 1.1E-6
score: 29.5
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 109..168
e-value: 0.0056
score: 25.9
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 109..152
e-value: 7.6E-10
score: 38.3
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 109..183
score: 9.783
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 108..166
e-value: 7.5E-12
score: 47.2
IPR005710Ribosomal protein S4/S9, eukaryotic/archaealTIGRFAMTIGR01018TIGR01018coord: 8..166
e-value: 1.1E-63
score: 212.0
IPR022801Ribosomal protein S4/S9PANTHERPTHR1183130S 40S RIBOSOMAL PROTEINcoord: 1..195
NoneNo IPR availablePANTHERPTHR11831:SF25coord: 1..195
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 12..160
IPR018079Ribosomal protein S4, conserved sitePROSITEPS00632RIBOSOMAL_S4coord: 107..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig106contigS-firma_F_contig106:3225..6892 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig106.814.1mRNA_S-firma_F_contig106.814.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig106 3174..7584 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig106.814.1 ID=prot_S-firma_F_contig106.814.1|Name=mRNA_S-firma_F_contig106.814.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=196bp
MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFA
LAKIRKAARQLLTLDTKDPKRLFEGPALLRRMARFGLLGEDERELDFVLQ
LTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMV
RMDSEKHIDFSITSPYGQGRPGRVARKRAASKAAAGGDDGDESDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018079Ribosomal_S4_CS
IPR022801Ribosomal_S4/S9
IPR005710Ribosomal_S4/S9_euk/arc
IPR036986S4_RNA-bd_sf
IPR002942S4_RNA-bd
IPR001912Ribosomal_S4/S9_N