mRNA_S-firma_F_contig10570.780.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10570.780.1 vs. uniprot
Match: A0A6G0WP54_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP54_9STRA) HSP 1 Score: 205 bits (521), Expect = 3.910e-62 Identity = 110/228 (48.25%), Postives = 147/228 (64.47%), Query Frame = 1
Query: 1 RYPDL-SPGGVLRLADYAGTAVFAASGSITAGVAGMDVCGQLIVGVVTAVGGGTFRDAIMLNKRPFWMEEWEYIALGLAAALATSMVWPTLKPDGYVKGEVRKSWAAQGGGEGSAMQTADSAALGVFAVVGAMNGIRGGCHPLLVATCGMATATFGGMTRDVLTRRPVRILHSHEEPYATVAFSSALGYMALRGVGASL-AVRMGAVVTATTAVRWLLVNNGVKLPAW 678
R+P+L SP G LR D+ GTAVFA SGS+TA +G D+ G ++VG +TA GGGT RDA++LNK PFW+EEWEY+ L AAA T +W L P + + + GGEG+ + D+ +G FAV+GAMNGIR C L+ + CGM TATFGGMTRD L RPVRILH + + YA VAF++A Y+A+RG+ L +R+ + V A+R +G + P W
Sbjct: 48 RWPNLTSPTGCLRSLDWFGTAVFAVSGSLTAVTSGCDLFGSVLVGTITATGGGTLRDALVLNKSPFWVEEWEYLVLSAAAAAGTFYLWGQLSPGKEIIEGSGMTLKSADGGEGTLLDWGDAIGIGAFAVIGAMNGIRAQCPLLVSSICGMMTATFGGMTRDTLLNRPVRILHPYADTYAPVAFTTATAYLAMRGIAPRLQGIRIASCVALGVAMRQQASTHGWRFPHW 275
BLAST of mRNA_S-firma_F_contig10570.780.1 vs. uniprot
Match: A0A2R5GH45_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GH45_9STRA) HSP 1 Score: 202 bits (515), Expect = 5.920e-61 Identity = 112/235 (47.66%), Postives = 147/235 (62.55%), Query Frame = 1
Query: 1 RYPDLSPG-GVLRLADYAGTAVFAASGSITAGVAGMDVCGQLIVGVVTAVGGGTFRDAIMLNKRPFWMEEWEYIALGLAAALATSMVWPTLKPDGYVKGEVRKSWAAQGGGEGSAMQTADSAALGVFAVVGAMNGIRGGCHPLLVATCGMATATFGGMTRDVLTRRPV------RILHSHEEPYATVAFSSALGYMALRGVGASLAVRMGAVVTATTAVRWLLVNNGVKLPAWGE 684
RYP LS G+LR ADY GT FA SG+ITAG GMD G IVG A+GGGT RDAI+L+K+PFW+EE+EY+ + AAALATSM+WPTL DGY+K + GEG + D+ +G FAV+G N +R HP++ TCGM TATFGG+TRDVL P RI+HSH + YA+ AF+ A Y+ R + LAVR+ + V + +R+ + LP+W +
Sbjct: 51 RYPSLSSSRGLLRGADYLGTVAFAMSGAITAGTVGMDAVGCTIVGTTVALGGGTMRDAIILHKQPFWVEEYEYLLMAAAAALATSMLWPTLPSDGYLKDDNE--------GEGKLLWAGDALGVGAFAVIGCQNALRMCLHPVIACTCGMVTATFGGLTRDVLCGLPKETQGNGRIMHSHGDLYASTAFAGAASYVFARSMALPLAVRIFSGVGISVGLRYAAATYELGLPSWDK 277
BLAST of mRNA_S-firma_F_contig10570.780.1 vs. uniprot
Match: A0A067C3S4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C3S4_SAPPC) HSP 1 Score: 197 bits (501), Expect = 1.870e-58 Identity = 108/231 (46.75%), Postives = 145/231 (62.77%), Query Frame = 1
Query: 1 RYPDL-SPGGVLRLADYAGTAVFAASGSITAGVAGMDVCGQLIVGVVTAVGGGTFRDAIMLNKRPFWMEEWEYIALGLAAALATSMVWPTLKPDGYVKGEVRKSWAAQGGGEGSAMQTADSAALGVFAVVGAMNGIRGGCHPLLVATCGMATATFGGMTRDVLTRRPVRILHSHEEPYATVAFSSALGYMALRGVGASL-AVRMGAVVTATTAVRWLLVNNGVKLPAWGED 687
R+P L +P G LR D+ GT VFA SGS+TA + G D+ G +I+G +TAVGGGT RDA++LNK+PFW+EEWEY+ + AA W ++P + + + GGEG+AM+ D+ +G FAV+GAMNGIR L+ A CGM T+TFGG+TRD L RPVRILHS+ + YATVAFSSA Y+ALR R+ A + +R +G +LP W +
Sbjct: 101 RWPGLRTPTGFLRSLDWFGTIVFATSGSLTAAMCGADLLGSIIIGTITAVGGGTLRDALVLNKQPFWVEEWEYLVMSALAATTAFYFWGDMRPGQEIVPGSGLTLKSADGGEGTAMEWGDAVGVGAFAVIGAMNGIRASSPMLVSALCGMMTSTFGGLTRDTLLGRPVRILHSYSDVYATVAFSSACLYLALRKAAPRYQGCRIFAAICLAVFLREQAWTHGWRLPFWAAN 331
BLAST of mRNA_S-firma_F_contig10570.780.1 vs. uniprot
Match: A0A1V9ZRR4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZRR4_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.950e-56 Identity = 106/231 (45.89%), Postives = 146/231 (63.20%), Query Frame = 1
Query: 1 RYPDLSPG-GVLRLADYAGTAVFAASGSITAGVAGMDVCGQLIVGVVTAVGGGTFRDAIMLNKRPFWMEEWEYIALGLAAALATSMVWPTLKPDGYVKGEVRKSWAAQGGGEGSAMQTADSAALGVFAVVGAMNGIRGGCHPLLVATCGMATATFGGMTRDVLTRRPVRILHSHEEPYATVAFSSALGYMALRGVGASL-AVRMGAVVTATTAVRWLLVNNGVKLPAWGED 687
R+P L+ G+LR D+ GT VFA SGS+TA + G D+ G +I+G +TAVGGGT RDA++LNK+PFW+EEWEY+ L AA A W +KP + + + GGEG+ M+ +D+ +G FAV+GAMNGIR L+ A CGM T+TFGG+TRD L RPVRILHS+ + YATVA SSA Y+++R + A R+ + +R +G +LP W +
Sbjct: 95 RWPGLTASTGLLRGLDWFGTLVFATSGSLTAAMCGADLLGSIIIGTITAVGGGTLRDALVLNKQPFWVEEWEYLVLSGVAATAAFYFWGDMKPGQELVPGSGLTLKSADGGEGTMMEWSDAVGVGTFAVIGAMNGIRANSPFLVSAICGMMTSTFGGLTRDTLLGRPVRILHSYNDVYATVALSSACLYLSMRKIAPQQQAARIFLSIALAVVLREQAWTHGWRLPFWATN 325
BLAST of mRNA_S-firma_F_contig10570.780.1 vs. uniprot
Match: A0A6A4Y628_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4Y628_9STRA) HSP 1 Score: 190 bits (482), Expect = 3.170e-56 Identity = 108/228 (47.37%), Postives = 137/228 (60.09%), Query Frame = 1
Query: 1 RYPDL-SPGGVLRLADYAGTAVFAASGSITAGVAGMDVCGQLIVGVVTAVGGGTFRDAIMLNKRPFWMEEWEYIALGLAAALATSMVWPTLKPDGYVKGEVRKSWAAQGGGEGSAMQTADSAALGVFAVVGAMNGIRGGCHPLLVATCGMATATFGGMTRDVLTRRPVRILHSHEEPYATVAFSSALGYMALRGVGAS-LAVRMGAVVTATTAVRWLLVNNGVKLPAW 678
R+P L S G LR D+ GTAVFA SGS+TA G D+ G +VG +TAVGGGT RDA++L K PFW++EWEY+ L AAA W + P G + A GGEG+ M D+ +G FAV+GAMNGIR C L+ A CGM TATFGG+TRD L RP RILH + + YA +AFS A Y+A+R S +R+ A V +R +G +LP W
Sbjct: 51 RWPSLTSATGCLRSLDWFGTAVFAVSGSLTAATTGCDLLGCTLVGTITAVGGGTLRDALVLQKPPFWVDEWEYLVLSAAAAAGAFYFWGDVDPGRAFFGLDGLTLKAADGGEGTLMDWGDAVGVGAFAVIGAMNGIRAQCPLLVSALCGMMTATFGGLTRDTLLHRPGRILHPYADTYAPIAFSGAATYLAMRATAPSHQGLRIAACVGLAVGLRQQAWTHGWRLPHW 278
BLAST of mRNA_S-firma_F_contig10570.780.1 vs. uniprot
Match: A0A1V9ZTY0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTY0_9STRA) HSP 1 Score: 189 bits (479), Expect = 1.000e-55 Identity = 108/232 (46.55%), Postives = 144/232 (62.07%), Query Frame = 1
Query: 1 RYPDL-SPGGVLRLADYAGTAVFAASGSITAGVAGMDVCGQLIVGVVTAVGGGTFRDAIMLNKRPFWMEEWEYIALGLAAALATSMVWPTLKP-DGYVKGEVRKSWAAQGGGEGSAMQTADSAALGVFAVVGAMNGIRGGCHPLLVATCGMATATFGGMTRDVLTRRPVRILHSHEEPYATVAFSSALGYMALRGVGASL-AVRMGAVVTATTAVRWLLVNNGVKLPAWGED 687
R+P + SP G LR D+ GT VFAASGS+TA + G D+ G +IVG +TA+GGGT RDA++LNK+PFW+EEWEY+ + AA W +KP + G KS GGEG+AM+ D+ +G FAV+GAMNGIR ++ A CGM T+TFGG+TRD L RPVRILHS+ + YATVA SSA Y+ L+ R+ + +R +G +LP W +
Sbjct: 56 RWPGIRSPTGFLRSLDWFGTLVFAASGSLTAAMCGADLLGSIIVGTITAIGGGTLRDALVLNKQPFWIEEWEYLVMSAFAATLAFYFWGDMKPGQELLPGLTLKS---VDGGEGTAMEWGDAIGVGAFAVIGAMNGIRAQSPFVVSALCGMMTSTFGGLTRDTLLGRPVRILHSYSDVYATVALSSACLYLGLQKAAPKYQGTRIFLAIVLAIVLREQAWTHGWRLPFWAAN 284
BLAST of mRNA_S-firma_F_contig10570.780.1 vs. uniprot
Match: W4GLY3_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLY3_9STRA) HSP 1 Score: 187 bits (474), Expect = 7.060e-55 Identity = 103/231 (44.59%), Postives = 139/231 (60.17%), Query Frame = 1
Query: 1 RYPDL-SPGGVLRLADYAGTAVFAASGSITAGVAGMDVCGQLIVGVVTAVGGGTFRDAIMLNKRPFWMEEWEYIALGLAAALATSMVWPTLKPDGYVKGEVRKSWAAQGGGEGSAMQTADSAALGVFAVVGAMNGIRGGCHPLLVATCGMATATFGGMTRDVLTRRPVRILHSHEEPYATVAFSSALGYMALRGVGASL-AVRMGAVVTATTAVRWLLVNNGVKLPAWGED 687
R+P L S G LR D+ G+ VFA SGS+TA AG D+ G ++G +TAVGGGT RDA++LNK+PFW+EEWEY+ AAA +W + V + + GGEG+ M D+ +G FAV+GAMNGIR L+ A CGM T+TFGGMTRD L RPVRILH + + YA +AF+ A Y+A+R V +R+ + V +R +G +LP W +
Sbjct: 67 RWPSLTSATGCLRTLDWFGSVVFAVSGSLTAATAGCDLLGCTLIGTITAVGGGTLRDALVLNKQPFWIEEWEYLVFSGAAAAGAFYLWGQIPAGDEVIEGTGLTLKSADGGEGTLMDWGDAVGVGAFAVIGAMNGIRAQSPLLVSALCGMMTSTFGGMTRDTLLNRPVRILHPYADTYAPIAFTGAAAYLAMRAVAPQYQGLRIASCVALAVGLRQQAWTDGWRLPHWDVE 297
BLAST of mRNA_S-firma_F_contig10570.780.1 vs. uniprot
Match: A0A7S0XJP0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0XJP0_9STRA) HSP 1 Score: 184 bits (467), Expect = 3.130e-53 Identity = 111/263 (42.21%), Postives = 144/263 (54.75%), Query Frame = 1
Query: 1 RYPDL-SPGGVLRLADYAGTAVFAASGSITAGVAGMDVCGQLIVGVVTAVGGGTFRDAIMLNKRPFWMEEWEYIALGLAAALATSMVWP--------------------------------TLKPDGYVKGEVRKSWAAQGGGEGSAMQTADSAALGVFAVVGAMNGIRGGCHPLLVATCGMATATFGGMTRDVLTRRPVRILHSHEEPYATVAFSSALGYMALRGVGASLAVRMGAVVTATTAVRWLLVNNGVKLPAWGEDR 690
RYP+L +PGG+LR ADYAGT FA +G+ITA +G+DV G +IVG++T+VGGGT RDAI LN++PFW EE EYI +G+ L T VWP T K + + + + + T D+ L FA++GA NGIR L+ A CGMATATFGG+ RDV+ RPVRI+HS+ E YA A + A Y+A G S AVR+GA R+ V N VKL W D+
Sbjct: 90 RYPNLKTPGGMLRGADYAGTLTFALTGTITAAQSGLDVFGSVIVGIITSVGGGTIRDAIFLNRKPFWTEETEYIWMGIITGLVTFFVWPQSVLEWQRTKQQKELENQIERRQSKNRPASSQTTAEAKITKAKAKANLSKHYDTVDGILDTLDAIGLSAFAIIGAQNGIRASMPLLVSAICGMATATFGGLIRDVICGRPVRIVHSNAEVYAPPALAGATVYLASITAGGSPAVRIGAAFLVCMGTRFWAVVNNVKLHTWDIDQ 352
BLAST of mRNA_S-firma_F_contig10570.780.1 vs. uniprot
Match: R7Q7M5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7M5_CHOCR) HSP 1 Score: 180 bits (457), Expect = 7.300e-53 Identity = 103/227 (45.37%), Postives = 129/227 (56.83%), Query Frame = 1
Query: 1 RYPDLSPGGVLRLADYAGTAVFAASGSITAGVAGMDVCGQLIVGVVTAVGGGTFRDAIMLNKRPFWMEEWEYIALGLAAALATSMVWPTLKPDGYVKGEVRKSWAAQGGGEGSAMQ-TADSAALGVFAVVGAMNGIRGGCHPLLVATCGMATATFGGMTRDVLTRRPVRILHSHEEPYATVAFSSALGYMALRGVGASLAVRMGAVVTATTAVRWLLVNNGVKLPAW 678
R+P LS G LR DY GT FA +G++ A +GMD G +VG +TAVGGGT RDA++LN RPFW EE EY+ L L A+ T +WP K D SA+ DSA + FAV+GA NG+R G ++ CGMATATFGG RDVL R VRILHSH E YAT A A+ Y+ +R +GA + R+G + A R G +LP W
Sbjct: 51 RFPTLSTPGGLRALDYVGTLSFAHTGALLAATSGMDALGTCVVGTITAVGGGTIRDAVILNARPFWTEEPEYLYLCLLASGLTFAMWPREKEDN------------------SALHFVTDSAGVAAFAVIGAQNGVRAGVPAIVSVVCGMATATFGGAVRDVLCNRKVRILHSHAEVYATTAAMGAISYLGMRRMGAGVRARVGTGLVVAFAGRCFAWRYGTRLPVW 259
BLAST of mRNA_S-firma_F_contig10570.780.1 vs. uniprot
Match: A0A485K4X7_9STRA (Aste57867_1357 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K4X7_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.620e-52 Identity = 104/228 (45.61%), Postives = 142/228 (62.28%), Query Frame = 1
Query: 1 RYPDLS-PGGVLRLADYAGTAVFAASGSITAGVAGMDVCGQLIVGVVTAVGGGTFRDAIMLNKRPFWMEEWEYIALGLAAALATSMVWPTLKPDGYVKGEVRKSWAAQGGGEGSAMQTADSAALGVFAVVGAMNGIRGGCHPLLVATCGMATATFGGMTRDVLTRRPVRILHSHEEPYATVAFSSALGYMALRGVGASL-AVRMGAVVTATTAVRWLLVNNGVKLPAW 678
R+P +S P +LR D GT++FAASGS+ A G D+ G L+VG +TAVGGGT+RD I+L+K+PFW+ EWEY+AL +A A A ++W + V G K G G + D+ +GV AV+GAMNGIR C + A CGM TATFGG+TRDV+ RPVRIL+SH E YA +A + A Y++L+ + AVR+ A V A+R +G ++P W
Sbjct: 64 RWPGVSSPTHILRSLDLFGTSIFAASGSLAAATTGCDLIGCLVVGSMTAVGGGTWRDVIILHKQPFWVVEWEYLALSMAVAAAVFLLWGCIPLGQTVLGASLK---LANGDAGVLLDWGDAVGVGVCAVIGAMNGIRHHCPAFISALCGMITATFGGLTRDVVLNRPVRILYSHAEVYAVIALTGAAVYLSLQRLAPKQQAVRIFACVALVMALRQQAWTHGWRMPVW 288 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10570.780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10570.780.1 >prot_S-firma_F_contig10570.780.1 ID=prot_S-firma_F_contig10570.780.1|Name=mRNA_S-firma_F_contig10570.780.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=232bp RYPDLSPGGVLRLADYAGTAVFAASGSITAGVAGMDVCGQLIVGVVTAVGback to top mRNA from alignment at S-firma_F_contig10570:4131..5035- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10570.780.1 ID=mRNA_S-firma_F_contig10570.780.1|Name=mRNA_S-firma_F_contig10570.780.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=905bp|location=Sequence derived from alignment at S-firma_F_contig10570:4131..5035- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10570:4131..5035- >mRNA_S-firma_F_contig10570.780.1 ID=mRNA_S-firma_F_contig10570.780.1|Name=mRNA_S-firma_F_contig10570.780.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1392bp|location=Sequence derived from alignment at S-firma_F_contig10570:4131..5035- (Sphaerotrichia firma ET2_F female)back to top |