mRNA_S-firma_F_contig10555.768.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig10555.768.1 vs. uniprot
Match: UPI00194E5EB5 (hypothetical protein n=1 Tax=Archangium violaceum TaxID=83451 RepID=UPI00194E5EB5) HSP 1 Score: 143 bits (361), Expect = 8.890e-38 Identity = 96/271 (35.42%), Postives = 135/271 (49.82%), Query Frame = 1
Query: 1 AALDGIARRLLLETAIVIAGKQYHMVEIEAYVNTERLDVHQDTFTHGHARQKLFGRWYFHAKGTGYKGGTYKGMDIAFGGPGIAAGFLIRAVAPVG-GGDLVSGPCKVVDHILRASRVGSIPALVERFEGDVPRVGAHGTMAAAGEPSPLFL----APLQTPRTVDCFTSPRVGLSLKTATPGSAHQQYFARPYRWLTEP-KVKSGREYTAVGMAAAGLSPETIAEHIGSNLKTIQGYVEAWKRGSKAGACEALYGKALSTADRCFAMGAC 795
A+ +A LL + G+ + E+E Y H D FTHG Q GRWYFH G Y+GG+YKG+DIA G PG G LIR + +G G ++ GPC VDHIL + SI +LV F + G SPL++ AP R + S RVGL+LK T ++ RPYR+LTEP ++K GR + + + A G E +A GS++ ++ YV ++ G E + + LST + C +GAC
Sbjct: 30 ASFQHLAELLLNTATCYVGGRPHRFTELEFYFTHPD---HPDPFTHGDPMQCERGRWYFHRTGNQYRGGSYKGLDIALGEPGAPGGILIRGMERLGDAGTMLDGPCLCVDHILALTGHASIASLVSTF--------SRGVDPEPSGASPLYVELDAAPAPARRV---YASARVGLTLKRGT-SVERVRFLPRPYRFLTEPARIKKGRLHVVIALHAQGYPAEEVARLTGSSVSQVRRYVAQYEAGQSRAPAE--FARDLSTDETCQLLGAC 283
BLAST of mRNA_S-firma_F_contig10555.768.1 vs. uniprot
Match: A0A084T0R1_9DELT (Uncharacterized protein n=3 Tax=Archangiaceae TaxID=39 RepID=A0A084T0R1_9DELT) HSP 1 Score: 140 bits (353), Expect = 5.750e-37 Identity = 100/262 (38.17%), Postives = 138/262 (52.67%), Query Frame = 1
Query: 28 LLLETAIV-IAGKQYHMVEIEAYVNTERLDVHQDTFTHGHARQKLFGRWYFHAKGTGYKGGTYKGMDIAFGGPGIAAGFLIRAVAPVGGGD-LVSGPCKVVDHILRASRVGSIPALVERFEGDVPRVGAHGTMAAAGEPSPLFL---APLQTPRTVDCFTSPRVGLSLKTATPGSAHQQYFARPYRWLTEP-KVKSGREYTAVGMAAAGLSPETIAEHIGSNLKTIQGYVEAWKRGSKAGACEALYGKALSTADRCFAMGAC 795
LLL TAI + G + E+E Y R D H D FTHG Q GRWYFH G+ Y+GG+YKG+DIA G PG G LIR + +G L+ GP VDHIL + SI +LV F + G SPL++ +P R V + S RVGL+LK T ++ +RPYR+LTEP ++K GR + AV + A G E +A GS++ ++ Y+ ++ G E + + LST + C +GAC
Sbjct: 4 LLLNTAICYVGGHPHRFTELEFYFT--RPD-HPDPFTHGDPMQCERGRWYFHRAGSQYRGGSYKGLDIAIGEPGAPGGILIRGMEQLGEDSRLLDGPSLCVDHILALTGHASIASLVSTF--------SRGVDPEPPGDSPLYVVLDSPPAPARRV--YASARVGLTLKRGT-SEERVRFLSRPYRFLTEPARIKKGRLHVAVALHAQGHPAEEVARLTGSSVSQVRRYIAQYEAGRSRAPAE--FARDLSTDETCQLLGAC 249
BLAST of mRNA_S-firma_F_contig10555.768.1 vs. uniprot
Match: A0A6M5YU07_9BACT (Uncharacterized protein n=1 Tax=Frigoriglobus tundricola TaxID=2774151 RepID=A0A6M5YU07_9BACT) HSP 1 Score: 138 bits (347), Expect = 8.840e-36 Identity = 92/260 (35.38%), Postives = 128/260 (49.23%), Query Frame = 1
Query: 16 IARRLLLETAIVIAGKQYHMVEIEAYVNTERLDVHQDTFTHGHARQKLFGRWYFHAKGTGYKGGTYKGMDIAFGGPGIAAGFLIRAVAPVGGGDLV-SGPCKVVDHILRASRVGSIPALVERFEGDVPRVGAHGTMAAAGEPSPLFLAPLQTPRTVDCFTSPRVGLSLKTATPGSAHQQYFARPYRWLTEPK-VKSGREYTAVGMAAAGLSPETIAEHIGSNLKTIQGYVEAWKRGSKAGACEALYGKALSTADRCFAMG 789
+A RLL T V+AG +Y E+E Y + H D F H Q GRWYFH Y+GG++KG+DIA G G L+R++ V D V GPC VDH+L ++ ++ AL G + SPL + PRT + RVGLSLK A + ++ ARPYR++TEP + G+ + + + G + E I IG KTI Y+ + G +A +A GK LSTAD C +G
Sbjct: 27 VANRLLNATDFVVAGDRYRFAELEMYYSG---GAHPDLFAHRDPVQLEAGRWYFHRTRGEYRGGSFKGLDIALGDGTAYFGVLVRSL--VAADDTVLDGPCVTVDHLLAKTKTATVAALD----------GVINARSVWDPSSPLHIVDADPPRTAQVYQCSRVGLSLKKAKGKADAPRFVARPYRFMTEPAGISKGKPHLVLALHRVGHTAEEIRAIIGMPKKTIDRYIADFTAGGQAETFDAYIGKDLSTADLCKLLG 271
BLAST of mRNA_S-firma_F_contig10555.768.1 vs. uniprot
Match: A0A225EG10_9BACT (Uncharacterized protein n=1 Tax=Fimbriiglobus ruber TaxID=1908690 RepID=A0A225EG10_9BACT) HSP 1 Score: 134 bits (336), Expect = 2.170e-34 Identity = 92/257 (35.80%), Postives = 128/257 (49.81%), Query Frame = 1
Query: 16 IARRLLLETAIVIAGKQYHMVEIEAYVNTERLDVHQDTFTHGHARQKLFGRWYFHAKGTGYKGGTYKGMDIAFGGPGIAAGFLIRAVAPVGGGDLVSGPCKVVDHILRASRVGSIPALVERFEGDVPRVGAHGTMAAAGEPSPLFLAPLQTPRTVDCFTSPRVGLSLKTATP--GSAHQQYFARPYRWLTEP-KVKSGREYTAVGMAAAGLSPETIAEHIGSNLKTIQGYVEAWKRGSKAGACEALYGKALSTADRC 777
IA LL +T + + GK + +VE+EAY + H D F H Q G WYFH G Y+GG++KG+D+AFGG G L R + G LV GP +VD++LR + S+ L G R+ GT PL LAP++ P F + RVGL+LK P G + + R YR+LTEP + G+ + + A+G SPE I L I Y A+ G+ A YG++ STA+ C
Sbjct: 3 IATALLNQTELWVNGKPHRLVEVEAYYASPE---HPDPFAHRDPVQLAVGPWYFHRTGGTYRGGSFKGLDLAFGGGSDYGGVLFRGLEKPDG-SLVDGPSLLVDYLLREAGFRSVAELDRAIAG---RLAWDGTQ-------PLVLAPVRNPVDRPVFRTTRVGLTLKRRKPDEGDSAVGFLLRKYRYLTEPTRTMKGKPHMVLEQLASGASPEEIRLRTNCPLPAIARYAAAYAGGANESAFTPYYGRSWSTAEVC 245
BLAST of mRNA_S-firma_F_contig10555.768.1 vs. uniprot
Match: A0A6N7PVW1_9DELT (Uncharacterized protein n=1 Tax=Polyangium spumosum TaxID=889282 RepID=A0A6N7PVW1_9DELT) HSP 1 Score: 133 bits (335), Expect = 5.360e-34 Identity = 99/264 (37.50%), Postives = 131/264 (49.62%), Query Frame = 1
Query: 19 ARRLLLETAIVIAGKQYHMVEIEAYVNTERLDVHQDTFTHGHARQKLFGRWYFHAKGTGYKGGTYKGMDIAFGG-PGIAAGFLIRAVAPVGGGDLVSGPCKVVDHILRASRVGSIPALVERFEGDV-PRVGAHGTMAAAGEPSPLFLAPLQTPR--TVDCFTSPRVGLSLKT-ATPGSAHQQYFARPYRWLTEP-KVKSGREYTAVGMAAAGLSPETIAEHIGSNLKTIQGYVEAWKRGSKAGACEALYGKALSTADRCFAMGA 792
A LL + IAG + + E+E Y H+D F H Q G WYFH +G YKGGTYKG+DIA G P G LIR + G ++ G C VDH+L + + S+ ALV F+G + PR G SPL+L PR + F SPRVGL+LK ATP + + RPYR+ EP + K GR + VG+ G + E I GS ++ YV A++ G E Y + LST + C GA
Sbjct: 33 AHVLLNHATLHIAGAAHRLAEVEFYWYGPG---HEDPFAHRDPIQVESGIWYFHRQGGTYKGGTYKGVDIAMGRRPDTYVGILIRTIVEAASGAIIEGSCTCVDHVLARTGMESVAALVGSFDGSIDPREG-----------SPLYLTH-DKPRGGAAEVFDSPRVGLTLKKGATP--ERRAFLGRPYRFTIEPARTKKGRPHLVVGLHQKGRTNEEIRRITGSGAALVERYVRAFEAGKGKNPDE--YRRDLSTEELCALWGA 277
BLAST of mRNA_S-firma_F_contig10555.768.1 vs. uniprot
Match: A6FZX8_9DELT (Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 TaxID=391625 RepID=A6FZX8_9DELT) HSP 1 Score: 130 bits (327), Expect = 1.630e-32 Identity = 93/261 (35.63%), Postives = 128/261 (49.04%), Query Frame = 1
Query: 16 IARRLLLETAIVIAGKQYHMVEIEAYVNTERLDVHQDTFTHGHARQKLFGRWYFHAKG----TGYKGGTYKGMDIAFGGPGIAAGFLIRAVAPVGGGDLVSGPCKVVDHILRASRVGSIPALVERFEGD-VPRVGAHGTMAAAGEPSPLFLAPLQTPRTVDCFTSPRVGLSLKTATPGSAHQQYFARPYRWLTEPK-VKSGREYTAVGMAAAGLSPETIAEHIGSNLKTIQGYVEAWKRGSKAG-ACEALYGKALSTADRC 777
+ARRLL+ T +++AG + +VE+E Y D F H H Q + GRWYFH G GY+GGTYKG+DI FG P G LIR + G +LVSG VVDH+L + S+ +L + E V GA AAG + + + RVGLSLK + P R+LTEP + GR + + + GL TIA G+ + YV+A++ G A EA G++LS+A C
Sbjct: 25 LARRLLVNTELLVAGASHRLVEVEVYYRGPGF---ADPFAHAHEAQAVAGRWYFHRAGPGLDAGYRGGTYKGLDITFG-PAYG-GILIRTLRTPAG-ELVSGCSLVVDHLLARTGADSVASLAGQVEAHAVTEAGALQLRPAAGLDA-------------EVLATARVGLSLKRLADHPTMVDFIVAPLRYLTEPAAIAKGRVHAVIALHQQGLDAATIAARSGARAHVVSRYVDAYEAALAEGPAAEAYAGQSLSSAKLC 266
BLAST of mRNA_S-firma_F_contig10555.768.1 vs. uniprot
Match: UPI001B32E0BF (hypothetical protein n=1 Tax=Gemmata palustris TaxID=2822762 RepID=UPI001B32E0BF) HSP 1 Score: 130 bits (326), Expect = 1.840e-32 Identity = 88/259 (33.98%), Postives = 122/259 (47.10%), Query Frame = 1
Query: 16 IARRLLLETAIVIAGKQYHMVEIEAYVNTERLDVHQDTFTHGHARQKLFGRWYFHAKGTGYKGGTYKGMDIAFGGPGIAAGFLIRAVAPVGGGDLVSGPCKVVDHILRASRVGSIPALVERFEGDVPRVGAHGTMAAAGEPSPLFLAPLQTPRTVDCFTSPRVGLSLKTATPGSAHQQYFARPYRWLTEP-KVKSGREYTAVGMAAAGLSPETIAEHIGSNLKTIQGYVEAWKRGSKAGACEALYGKALSTADRCFAMG 789
IA RL+ E V+ G +Y E+E Y + H D F H Q GRWYFH Y+GG++KG+D+A G G LIR + G + GPC +VDH+L ++ S+ L G SP+ +A +TPR F+ RVGLSLK A ++ R YR+LTEP ++ GR + + + AG +TI G KTI+ YV + G + GK L TAD C +G
Sbjct: 47 IAGRLMNECDFVVGGGRYRFAELEMYYSG---GAHPDLFAHRDPLQLEDGRWYFHRTRGEYRGGSFKGLDLALGDGTAYFGILIRTIVGADG-TMFDGPCVMVDHLLAQTKSASVATLD----------GTINQRKIWDATSPVHIAEAETPRAAPVFSCSRVGLSLKKAKGKPDAPKFVGRAYRFLTEPMEISKGRPHLILALHRAGHDADTIRATTGVAKKTIERYVADFALGKPVENFDGYIGKDLGTADLCKLLG 291
BLAST of mRNA_S-firma_F_contig10555.768.1 vs. uniprot
Match: A0A5C1A8T7_9BACT (Uncharacterized protein n=1 Tax=Limnoglobus roseus TaxID=2598579 RepID=A0A5C1A8T7_9BACT) HSP 1 Score: 128 bits (321), Expect = 2.870e-32 Identity = 81/229 (35.37%), Postives = 121/229 (52.84%), Query Frame = 1
Query: 16 IARRLLLETAIVIAGKQYHMVEIEAYVNTERLDVHQDTFTHGHARQKLFGRWYFHAKGTGYKGGTYKGMDIAFGGPGIAAGFLIRAVAPVGGGDLVSGPCKVVDHILRASRVGSIPALVERFEGDVPRVGAHGTMAAAGEPSPLFLAPLQTPRTVDCFTSPRVGLSLKTATPGSAHQQYFARPYRWLTEPK-VKSGREYTAVGMAAAGLSPETIAEHIGSNLKTIQGYV 699
IA LL + +++AG+ + + E+E Y + H+D F H Q+ G WYFH G Y+GG++KG+D+AFG PG+ +G L R + G V GP +VDHIL+ + S+ L G RV + SP+ L L P + + + RVGL+LK AT G Q+ + YR+LTEP+ K G+ + G+ G+ E I E GS L +I+ Y+
Sbjct: 22 IAATLLNASRLIVAGEPHRLTEVELYYHGP---AHEDPFAHRDPVQQQVGVWYFHRTGGTYRGGSFKGLDLAFGSPGVFSGLLFRGLED-SAGRFVDGPSLLVDHILKKTGAKSVREL---DAGIADRVAWDAS-------SPVHLMRLPEPESRPIYRAARVGLTLKRATLGDPRPQFLRKDYRFLTEPRHTKKGKAHIVRGLHQQGVPIERIRELTGSPLASIRRYL 236
BLAST of mRNA_S-firma_F_contig10555.768.1 vs. uniprot
Match: A0A4V0I1A8_9BACT (Uncharacterized protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A4V0I1A8_9BACT) HSP 1 Score: 128 bits (322), Expect = 4.410e-32 Identity = 87/262 (33.21%), Postives = 126/262 (48.09%), Query Frame = 1
Query: 7 LDGIARRLLLETAIVIAGKQYHMVEIEAYVNTERLDVHQDTFTHGHARQKLFGRWYFHAKGTGYKGGTYKGMDIAFGGPGIAAGFLIRAVAPVGGGDLVSGPCKVVDHILRASRVGSIPALVERFEGDVPRVGAHGTMAAAGEPSPLFLAPLQTPRTVDCFTSPRVGLSLKTATPGSAHQQYFARPYRWLTEPK-VKSGREYTAVGMAAAGLSPETIAEHIGSNLKTIQGYVEAWKRGSKAGACEALYGKALSTADRCFAMG 789
+ G+ LL +V AG Y E+EAY + H D F H Q GRWYFH Y+GG++KG+D+AFG G LIR V G ++ GPC VDH+L ++ + L G R T +PLF+ + R+ + RVGLSLK A ++ RPYR+LTEP+ V G+ + + + G + + IA G KT++ YV+ ++ G A + GK LST + C +G
Sbjct: 24 VSGLVEYLLNRVDLVAAGAVYRFAELEAYYHGPG---HLDLFAHRDPVQLENGRWYFHRTRGEYRGGSFKGLDLAFGDGTAHFGILIRTVVGADG-TVLDGPCVTVDHLLALTKAKDVATLDSLISG---RKVWDAT-------APLFIRESEQERSAPVYRCSRVGLSLKKAKGKPDAPRFVGRPYRFLTEPRLVTKGKPHLVLALHRRGETADAIAALTGCPKKTVERYVKDFEAGKAAAGFDGYVGKDLSTGELCNMLG 271
BLAST of mRNA_S-firma_F_contig10555.768.1 vs. uniprot
Match: A0A2I2L3C2_9PHYC (Methylpurine-DNA glycosylase n=1 Tax=Orpheovirus IHUMI-LCC2 TaxID=2023057 RepID=A0A2I2L3C2_9PHYC) HSP 1 Score: 127 bits (319), Expect = 6.400e-32 Identity = 83/263 (31.56%), Postives = 129/263 (49.05%), Query Frame = 1
Query: 10 DGIARRLLLETAIVIAGKQYHMVEIEAYVNTERLDVHQDTFTHGHARQKLFGRWYFH----AKGTGYKGGTYKGMDIAFGGPGIAAGFLIRAVAPVGGGDLVSGPCKVVDHILRASRVGSIPALVERFEGDVPRVGAHGTMAAAGEPSPLFLAPLQTPRTVDCFTSPRVGLSLKTATPGSAHQQYFARPYRWLTEPKVKSGREYTAVGMAAAGLSPETIAEHIGSNLKTIQGYVEAWKRGSKAGACEALYGKALSTAD--RCF 780
D ++ LL ++ +V AGK+Y ++EIE Y ++ H D HGH Q + G WYFH + +GY+GGTYKG+DI FG G G L+RA+ + G+++ GPC +VD IL + +I LV++ + RVG + E P D + +PR+GL + + T Y YR+++EPK+K G+ + G + + I + GS K I+ + + G GK L D RC+
Sbjct: 4 DQLSDVLLNKSLLVCAGKKYRLLEIEFYYKSKE---HNDESIHGHPLQYISGNWYFHRTSATESSGYRGGTYKGLDITFGSDGNPGGILLRAMQSIENGEIIEGPCLLVDRILSDTMSSNIEELVKKID---LRVGILDNLYILREELPYK----------DIYKAPRIGLRMISPT-------YTMLEYRYISEPKLKKGKATLISSLYCLGHNIDKIGQLTGSTKKKIEEIIGTFNDGYNNSNIHDYIGKKLENKDIHRCY 243 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10555.768.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10555.768.1 >prot_S-firma_F_contig10555.768.1 ID=prot_S-firma_F_contig10555.768.1|Name=mRNA_S-firma_F_contig10555.768.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=269bp AALDGIARRLLLETAIVIAGKQYHMVEIEAYVNTERLDVHQDTFTHGHARback to top mRNA from alignment at S-firma_F_contig10555:3697..4552- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10555.768.1 ID=mRNA_S-firma_F_contig10555.768.1|Name=mRNA_S-firma_F_contig10555.768.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=856bp|location=Sequence derived from alignment at S-firma_F_contig10555:3697..4552- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10555:3697..4552- >mRNA_S-firma_F_contig10555.768.1 ID=mRNA_S-firma_F_contig10555.768.1|Name=mRNA_S-firma_F_contig10555.768.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1614bp|location=Sequence derived from alignment at S-firma_F_contig10555:3697..4552- (Sphaerotrichia firma ET2_F female)back to top |