mRNA_S-firma_F_contig10553.764.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10553.764.1
Unique NamemRNA_S-firma_F_contig10553.764.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10553.764.1 vs. uniprot
Match: K3WDI8_GLOUD (zf-NOSIP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDI8_GLOUD)

HSP 1 Score: 164 bits (414), Expect = 1.860e-45
Identity = 102/277 (36.82%), Postives = 146/277 (52.71%), Query Frame = 1
Query:   13 HGTESVRLGKDSLRPFDYCCLCTQRIQTVTAPVVSPGGYLFCKECIYNHLLMQREKLQQQRIAYEAQLEAKAADAARARAATEAAEIKAFEDAEVKVTSGVGADAFMMHKGP----KGEAIRKAIRNQVVLGVHDLRRKDLARTSFWIPEQTPDAGPDDIAKPDPLPRCPCSGAFLRMKQLVDVKFHESAADVRVGLRYHCPACLKSLQYQPACVLRKCGHALCAKCTKKFVVPAKRCFVCNMRCKPGKDIINLKAGETAFASHNSVTTKVYRPTMT 831
            HGT   R GKDS  PF  CCLC        +P+VSP G+++CKECIY +LL Q+  +Q+   +YE  LE +   A  A  A E A+++ F D      S  GA +   H  P    + E  +K +R +V     D +R+ + RTSFWIP+ TP+     + KPD   R P S   LR+K L+ VKF  SA+         C    K + +  A +LR  G  +   C K  V+P   C +  ++ +  KDI+ L+AG T F++H++V  K YRP+MT
Sbjct:   24 HGTLKRRFGKDSQLPFGCCCLCVASTHDGKSPLVSPSGFVYCKECIYANLLSQKRAIQENTASYERFLEKQEQSAQDAVIAHERAQLQQFLD------SATGASSSSSHNKPDEEHEVETYKKKLREKVDRTTDDDKREAMKRTSFWIPDCTPEVD-TKVEKPDTKTRDPMSLEELRLKHLMPVKFEWSASKDGAAPHVLCAITKKEITHHQAVLLRPSGLVILESCVKDMVLPTMMCPITGLKLRK-KDIVKLQAGGTGFSAHSTVEAKKYRPSMT 292          
BLAST of mRNA_S-firma_F_contig10553.764.1 vs. uniprot
Match: A0A8K1CLL8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLL8_PYTOL)

HSP 1 Score: 155 bits (393), Expect = 2.240e-42
Identity = 100/273 (36.63%), Postives = 143/273 (52.38%), Query Frame = 1
Query:   13 HGTESVRLGKDSLRPFDYCCLCTQRIQTVTAPVVSPGGYLFCKECIYNHLLMQREKLQQQRIAYEAQLEAKAADAARARAATEAAEIKAFEDAEVKVTSGVGADAFMMHKGPKGEAIRKAIRNQVVLGVHDLRRKDLARTSFWIPEQTPDAGPDDIAKPDPLPRCPCSGAFLRMKQLVDVKFHESAADVRVGLRYHCPACLKSLQYQPACVLRKCGHALCAKCTKKFVVPAKRCFVCNMRCKPGKDIINLKAGETAFASHNSVTTKVYRPTMT 831
            HGT   R GKDS   F +C LC  R +    P+VSP GY++CKECIY +LL Q+  +Q+   AYE   E +  DA     A E  EIK F    +  + G G +     K    EAI+  +R +V     D +R  + RTSFWIP+ TP A  + + +PD   R P S   L++K L+ VKF   A          C    K++ +Q A +LR  G  +   C K  V+P   C V  ++ +  KD++ L+ G ++F++H++V  K YRPTMT
Sbjct:   24 HGTLKRRFGKDSQLAFGFCALCLARTED-KQPLVSPSGYVYCKECIYANLLAQKRAIQENLDAYERFCEKREQDAQDTLVAKEREEIKKF----LSASDGSGVNG-QNTKSDDAEAIQNKLREKVDRTTDDAKRDAMKRTSFWIPDCTPTAQ-NKMDQPDTKTRDPMSNEELKLKHLMPVKFEWLAEGSSKDKHVVCAVTKKAITHQLAVLLRPSGQVILDSCVKDMVLPTMTCPVSGLKLRK-KDLVKLQTGGSSFSAHSNVEAKKYRPTMT 288          
BLAST of mRNA_S-firma_F_contig10553.764.1 vs. uniprot
Match: A0A662WXT0_9STRA (zf-NOSIP domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WXT0_9STRA)

HSP 1 Score: 149 bits (376), Expect = 8.260e-40
Identity = 95/278 (34.17%), Postives = 140/278 (50.36%), Query Frame = 1
Query:   13 HGTESVRLGKDSLRPFDYCCLCTQRIQTVTAPVVSPGGYLFCKECIYNHLLMQREKLQQQRIAYEAQLEAKAADAARARAATEAAEIKAFEDAEVKVTSGVGADAFMMHKGPKGEAIRKAIRNQVVLGVHDLRRKDLARTSFWIPEQTPDAGPDDIAKPDPLPRCPCSGAFLRMKQLVDVKFHESAADVRVGLRYHCPACL-----KSLQYQPACVLRKCGHALCAKCTKKFVVPAKRCFVCNMRCKPGKDIINLKAGETAFASHNSVTTKVYRPTMT 831
            HGT   R G+DS  PF  CCLC        +P+VSPGG+++CKECIY +LL Q+  +Q+   AYE  LE +      A  A E  +++       KV  G         +    EA +  +  +V     D +R+ + +TSFWIP+ TP      + KPD   R P S   +++KQL+ VKF     +     +   P  L     K + +  A +LR  G  +   C K  V+P   C V  ++ +  KDI++L+AG T F++H++V  K YRPTMT
Sbjct:   24 HGTLKRRFGRDSQLPFGVCCLCLASTSNGRSPLVSPGGFVYCKECIYANLLAQKRTIQENLAAYERFLEKQTRQEQDAAVAEERKQLQ-------KVLEGATGAVDFQRQVDATEAAKARLSEKVDRATDDDKREAMKKTSFWIPDCTP-TQEATVEKPDTKTRDPMSLEEMKLKQLMPVKFEWETTETADTAKSTEPCVLCAVTKKEITHHRAVLLRPSGQVILESCLKDMVLPTMTCPVTGLKLRK-KDIVHLQAGGTGFSAHSNVEAKKYRPTMT 292          
BLAST of mRNA_S-firma_F_contig10553.764.1 vs. uniprot
Match: A0A5D6XYI6_9STRA (zf-NOSIP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYI6_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.010e-39
Identity = 104/297 (35.02%), Postives = 150/297 (50.51%), Query Frame = 1
Query:   13 HGTESVRLGKDSLRPFDYCCLC-TQRIQTVTAPVVSPGGYLFCKECIYNHLLMQREKLQQQRIAYEAQLEAKAADAARARAATEAAEIKAFEDAEVKVTSGVGADAFMM-------------HKGPKGEAIRKAIRNQVVLGVHDLRRKDLARTSFWIPEQTPDAGPDDIAKPDPLPRCPCSGAFLRMKQLVDVKF-----HESAADVRVGLRYHCPACL-----KSLQYQPACVLRKCGHALCAKCTKKFVVPAKRCFVCNMRCKPGKDIINLKAGETAFASHNSVTTKVYRPTMT 831
            HGT+  R G+D+   F  CCLC T       +P+VSPGG+L+CKECIY +LL Q+  +Q    AYE  LE +A  A     A E A+++      +  TSG G    ++              +  + +A  K++R +V     D +R+ + RTSFWIP+ TP A    + KPD   R P S   L++K L+ VKF     HE ++D         P  L     K + +  A +LR  G  L   C K  V+P   C V  ++ +  KDI+ L+AG + F++H+ V  K YRPTMT
Sbjct:   24 HGTQKRRFGRDAQLAFGSCCLCLTSTASAGKSPLVSPGGFLYCKECIYANLLAQKRTIQDNVAAYERALERQAQQAQDDALAGEQAQLRRL----LAATSGDGGAGTVLSXXXVLLDVGGASEEQRRADAYAKSLREKVDRTSDDAKREAMKRTSFWIPDCTPSAEAA-LTKPDTKTRDPMSLEELKLKHLMPVKFEWASAHERSSDKATTAAAAAPHVLCAVTKKEITHHQAVLLRPSGLVLLESCVKDMVLPTMTCPVSGLKLRK-KDIVKLQAGGSGFSAHSEVEAKKYRPTMT 314          
BLAST of mRNA_S-firma_F_contig10553.764.1 vs. uniprot
Match: A0A2D4CI17_PYTIN (Nitric oxide synthase-interacting protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CI17_PYTIN)

HSP 1 Score: 145 bits (366), Expect = 2.260e-38
Identity = 97/274 (35.40%), Postives = 145/274 (52.92%), Query Frame = 1
Query:   13 HGTESVRLGKDSLRPFDYCCLCTQRIQTVTAPVVSPGGYLFCKECIYNHLLMQREKLQQQRIAYEAQLEAKAADAARARAATEAAEIKAFEDAEVKVTSGVGADAFMMHKGPKGEAIRKAIRNQVVLGVHDLRRKDLARTSFWIPEQTPDAGPDDIAKPDPLPRCPCSGAFLRMKQLVDVKFHESAADVRVGLRY-HCPACLKSLQYQPACVLRKCGHALCAKCTKKFVVPAKRCFVCNMRCKPGKDIINLKAGETAFASHNSVTTKVYRPTMT 831
            HGT   R G+D+   F +C LC  R      P+VSP G++FCKECIY +LL Q+  +Q+   AYE   E +  DA  A    E A+++   DA    +S + A A       + + I+K +R +V     D +R  + RTS WIP+ TP A    + KPD   R P S   +++K L+ VKF    AD     ++  C    K++ +QPA +LR  G  +   C K  ++P   C +  ++ +  KDII L++G T  ++H++V  K YRPTMT
Sbjct:   24 HGTLKRRXGRDAQLQFGFCSLCLARTDG-KEPLVSPSGFVFCKECIYANLLAQKRTIQENLDAYERFCEKQEQDAQDAARVKEQAQLQQLLDA----SSSMAASAARPED--ESDVIKKKLRXKVDRTTDDAKRDAMKRTSXWIPDCTPTADAK-MDKPDTKTRDPMSQEEMKLKHLMPVKFDWVDADGDXKEKHVACAITKKAITHQPAVLLRPSGQVILESCVKDMILPTMTCPISGLKLRK-KDIIRLQSGGTGXSAHSNVEAKKYRPTMT 288          
BLAST of mRNA_S-firma_F_contig10553.764.1 vs. uniprot
Match: A0A3M6VQG5_9STRA (zf-NOSIP domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQG5_9STRA)

HSP 1 Score: 137 bits (345), Expect = 2.670e-35
Identity = 90/273 (32.97%), Postives = 141/273 (51.65%), Query Frame = 1
Query:   13 HGTESVRLGKDSLRPFDYCCLCTQRIQTVTAPVVSPGGYLFCKECIYNHLLMQREKLQQQRIAYEAQLEAKAADAARARAATEAAEIKAFEDAEVKVTSGVGADAFMMHKGPKGEAIRKAIRNQVVLGVHDLRRKDLARTSFWIPEQTPDAGPDDIAKPDPLPRCPCSGAFLRMKQLVDVKFHESAADVRVGLRYHCPACLKSLQYQPACVLRKCGHALCAKCTKKFVVPAKRCFVCNMRCKPGKDIINLKAGETAFASHNSVTTKVYRPTMT 831
            HGT   R G+DS   F  CCLC     +  +P+VSP G+++CKECIY +LL Q+  +Q    AYE  +E++          TE   ++      + +  GVGA      K  K     + ++ +V     D +R+ + +TSFWIP+  P    + + KPD + R P S   +++K L+ VKF  + +      +  C    K + +  A +LR  G  + A C K  V+P   C V  ++ +  KDI++L+AG T F++H++V  K YRPTMT
Sbjct:   24 HGTIKRRFGRDSQLSFGVCCLCLASTNS-RSPLVSPDGFVYCKECIYANLLAQKRTIQDNVTAYERFIESQERKKQDKTLQTERETLQMA----MGMAEGVGAG----QKPDKALLAMQKLKEKVDRATDDEKREAMKKTSFWIPDCAP-TQENKLDKPDTMTRDPMSLEPMKLKHLMPVKFDWNTSAPDGKPKVLCAVTKKEISHHHAVLLRPSGQVILATCLKDMVLPTMTCPVTGLKLRK-KDIVHLQAGGTGFSAHSTVEAKKYRPTMT 285          
BLAST of mRNA_S-firma_F_contig10553.764.1 vs. uniprot
Match: A0A2P4X1H0_9STRA (Nitric oxide synthase-interacting protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X1H0_9STRA)

HSP 1 Score: 137 bits (346), Expect = 2.770e-35
Identity = 94/277 (33.94%), Postives = 140/277 (50.54%), Query Frame = 1
Query:   13 HGTESVRLGKDSLRPFDYCCLCTQRIQTVTAPVVSPGGYLFCKECIYNHLLMQREKLQQQRIAYEAQLEAKAADAARARAATEAAEIKAFEDAEVKVTSGVGADAFMMHKGPKGEAIR----KAIRNQVVLGVHDLRRKDLARTSFWIPEQTPDAGPDDIAKPDPLPRCPCSGAFLRMKQLVDVKFHESAADVRVGLRYHCPACLKSLQYQPACVLRKCGHALCAKCTKKFVVPAKRCFVCNMRCKPGKDIINLKAGETAFASHNSVTTKVYRPTMT 831
            HGT   R G+DS  PF  CCLC     +  +P+VSPGG+++CKECIY +LL Q+  +Q+    YE  LE++           E   ++   DA         A+  ++  GP+ +  R    + +  +V     D +R+ + RTSFWIP+ TP      + KPD   R P S   +++K L+ VKF E         R  C    K + +  A +LR  G  +   C K  V P   C V  ++ +  KDI++L+AG T F++H++V  K YRPTMT
Sbjct:   38 HGTLKRRFGRDSQLPFGVCCLCLATTHS-RSPLVSPGGFVYCKECIYANLLTQKRSIQENLANYERFLESQERRTQDETIQKERQTLQKALDA---------AEGVVIATGPEKDQDRTQATQKLMEKVDRATDDEKREAMKRTSFWIPDCTP-TQETKVDKPDTKTRDPMSLDEMKVKHLMPVKF-EWDTSANGKHRVLCAVTKKEISHHHAVLLRPSGQVILESCLKDMVQPTMTCPVTGLKLRK-KDIVHLQAGGTGFSAHSTVEAKKYRPTMT 301          
BLAST of mRNA_S-firma_F_contig10553.764.1 vs. uniprot
Match: W2M2S6_PHYPR (zf-NOSIP domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2M2S6_PHYPR)

HSP 1 Score: 135 bits (340), Expect = 1.600e-34
Identity = 97/278 (34.89%), Postives = 144/278 (51.80%), Query Frame = 1
Query:   13 HGTESVRLGKDSLRPFDYCCLCTQRIQTVTAPVVSPGGYLFCKECIYNHLLMQREKLQQQRIAYEAQLEA---KAADAARARAATEAAEIKAFEDAEVKVTSGVGADAFMMHKGPKGEAIRKAIRNQVVLGVHDLRRKDLARTSFWIPEQTPDAGPDDIAKPDPLPRCPCSGAFLRMKQLVDVKFH--ESAADVRVGLRYHCPACLKSLQYQPACVLRKCGHALCAKCTKKFVVPAKRCFVCNMRCKPGKDIINLKAGETAFASHNSVTTKVYRPTMT 831
            HGT   R G+DS  PF  CCLC     +  +P+VSPGG+++CKECIY +LL Q+  +Q    AYE  +E    K  D A  +        KA + A+  +T     D        +  A +K ++ +V     D +R+ + +TSFWIP+ TP      + KPD   R P S   +++K L+ VKF    SAAD +  +   C    K + +  A +LR  G  +   C K  V+P   C V  ++ +  KDI++L+AG T F++H++V  K YRP MT
Sbjct:   24 HGTLKRRFGRDSQLPFGVCCLCLATTHS-RSPLVSPGGFVYCKECIYANLLAQKRSIQDNIAAYERFVEMQNHKQQDEALQKERESLQ--KALDTADRAMTGKPAQDLDQA----RALATQK-LKEKVDKATDDDKREAMKKTSFWIPDCTP-TQETKVDKPDTKTRDPMSLEEMKLKHLMPVKFEWDTSAADGKPKVL--CAVTKKEISHHRAVLLRPSGQVILESCLKDMVLPTMTCPVTGLKLRK-KDIVHLQAGGTGFSAHSTVEAKKYRPNMT 289          
BLAST of mRNA_S-firma_F_contig10553.764.1 vs. uniprot
Match: A0A388KH19_CHABU (RING-type domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KH19_CHABU)

HSP 1 Score: 133 bits (334), Expect = 1.970e-33
Identity = 91/269 (33.83%), Postives = 141/269 (52.42%), Query Frame = 1
Query:   13 HGTESVRLGKDSLRPFDYCCLCTQRIQTVTAPVVSPGGYLFCKECIYNHLLMQREKLQQQRIAYEAQ-LEAKAADAARARAATEAAEIKAFEDAEVKVTSGVGADAFMMHKGPKGEAIRKAIRNQVVLGVHDLRRKDLART--SFWIPEQTPDAGPDDIAKPDPLPRCPCSGAFLRMKQLVDVKF-----HESAADVRVGLRYHCPACLKSLQYQPACV-LRKCGHALCAKCTKKFVVPAKRCFVCNMRCKPGKDIINLKAGETAFASH 792
            +GT+  RLGKDSL+ FD CCLC   ++ V  P+    G++FCKECIY  LL Q++ +++++  Y+AQ L+ K   A R  A+  A  ++ F+    +   G GA      +  +    R    N V +  ++   ++  RT  +FW+P  TP+A P  + KP     CP     LR+K L  ++F      ES      G R+ CP+C          V +  CGH LC++CT KFVV  K C +C++ CK  + ++ ++ G T FA+H
Sbjct:   25 YGTQKERLGKDSLKAFDACCLC---LKAVIEPLCCQAGHIFCKECIYECLLAQKKDIKRKQALYQAQTLKDKELQAER-EASERARVLEQFDRQNNRAVPG-GAGKVQQSQHEQDTPSRFHGANSVKVTAYE---EEALRTMKAFWLPSATPEA-PQRVEKPVDHTVCPEGKEKLRLKDLFALRFDVVPNRESKTIELGGDRFRCPSCATVFTNSSTLVAIETCGHVLCSRCTSKFVVSDKMCCICSVPCK-SRHLVQVQKGGTGFAAH 283          
BLAST of mRNA_S-firma_F_contig10553.764.1 vs. uniprot
Match: A0A812VS04_9DINO (RAD54B protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812VS04_9DINO)

HSP 1 Score: 137 bits (346), Expect = 5.740e-33
Identity = 108/312 (34.62%), Postives = 157/312 (50.32%), Query Frame = 1
Query:   10 SHGTESVRLGKDSLRPFDYCCLCTQRIQTVTAPVVSPGGYLFCKECIYNHLLMQREKLQQQRIAYEAQLEAKAADAARARAATEAAEIKAFEDAEVKVTS-------------GVG-----ADAFMMHK---GPKGEAIRK------AIRNQVVLGVH--------DLRRKDLARTSFWIPEQTPDAGPDDIAKPDPLPRCPCSGAFLRMKQLVDVKFH----ESAADVRVGLRYHCPACLKSLQYQPACVLRKCGHALCAKCTKKFVVPAKRCFVCNMRCKPGKDIINLKAGETAFASHNS--VTTKVYRP 822
            S G+ SVRLGKDSL PF +C LCTQ       P+VSP G+++CKECIY +LL QR  L++Q+ A++AQ    AA+ + A  A  AA++++F D E   T+             GVG     A AF   +     +G  +R+      A R   V   H        D++R+++A TSFW+P   P++ P  + +P   P  P +GA LR K L+ VKFH    + AA    G RY C    KS+ +QPA +LR     + A   +  V       +      PG D++ L +  + FA+  S  +  K +RP
Sbjct:   35 SWGSRSVRLGKDSLLPFAHCYLCTQ---WAVEPLVSPSGHMYCKECIYKNLLSQRAALKKQKAAWKAQQXXDAAETSEAALAAAAADVQSFIDQETNPTAQLARGRGEAGSVLGVGTSTVQAAAFASPEEGAAAQGRTLRERAEAEAAQRTAAVQQAHARVDLRDEDVKRREVAATSFWVPSFAPESAPTRVKRPAARPSSPITGAPLRAKDLLPVKFHVEDKDEAAAGGKG-RYCCAITRKSITHQPAVLLRPSAAVVLASAFEAAVKGGMVDPINGASLGPG-DVVPLASEGSGFAARGSGKLVAKSWRP 341          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10553.764.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K3WDI8_GLOUD1.860e-4536.82zf-NOSIP domain-containing protein n=1 Tax=Globisp... [more]
A0A8K1CLL8_PYTOL2.240e-4236.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662WXT0_9STRA8.260e-4034.17zf-NOSIP domain-containing protein n=2 Tax=Nothoph... [more]
A0A5D6XYI6_9STRA1.010e-3935.02zf-NOSIP domain-containing protein n=1 Tax=Pythium... [more]
A0A2D4CI17_PYTIN2.260e-3835.40Nitric oxide synthase-interacting protein, putativ... [more]
A0A3M6VQG5_9STRA2.670e-3532.97zf-NOSIP domain-containing protein n=1 Tax=Peronos... [more]
A0A2P4X1H0_9STRA2.770e-3533.94Nitric oxide synthase-interacting protein n=2 Tax=... [more]
W2M2S6_PHYPR1.600e-3434.89zf-NOSIP domain-containing protein n=13 Tax=Phytop... [more]
A0A388KH19_CHABU1.970e-3333.83RING-type domain-containing protein n=1 Tax=Chara ... [more]
A0A812VS04_9DINO5.740e-3334.62RAD54B protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10553contigS-firma_F_contig10553:173..1292 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog65071.PYU1_T003029
PFAMszf-NOSIP
Max annot lvl121069|Pythiales
Evalue3.05e-46
EggNOG OGsKOG3039@1|root,KOG3039@2759|Eukaryota,1MAJE@121069|Pythiales
DescriptionNitric oxide synthase-interacting protein. Source PGD
COG categoryA
Hectar predicted targeting categoryother localisation
Exons4
Model size834
Cds size834
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10553.764.1prot_S-firma_F_contig10553.764.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10553 173..1292 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815591.5288866-CDS-S-firma_F_contig10553:172..2571622815591.5288866-CDS-S-firma_F_contig10553:172..257Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10553 173..257 +
1696949439.0915108-CDS-S-firma_F_contig10553:172..2571696949439.0915108-CDS-S-firma_F_contig10553:172..257Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10553 173..257 +
1622815591.542263-CDS-S-firma_F_contig10553:302..5741622815591.542263-CDS-S-firma_F_contig10553:302..574Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10553 303..574 +
1696949439.1028388-CDS-S-firma_F_contig10553:302..5741696949439.1028388-CDS-S-firma_F_contig10553:302..574Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10553 303..574 +
1622815591.5544257-CDS-S-firma_F_contig10553:700..9361622815591.5544257-CDS-S-firma_F_contig10553:700..936Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10553 701..936 +
1696949439.1124728-CDS-S-firma_F_contig10553:700..9361696949439.1124728-CDS-S-firma_F_contig10553:700..936Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10553 701..936 +
1622815591.5649343-CDS-S-firma_F_contig10553:1051..12921622815591.5649343-CDS-S-firma_F_contig10553:1051..1292Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10553 1052..1292 +
1696949439.1240416-CDS-S-firma_F_contig10553:1051..12921696949439.1240416-CDS-S-firma_F_contig10553:1051..1292Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10553 1052..1292 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10553.764.1

>prot_S-firma_F_contig10553.764.1 ID=prot_S-firma_F_contig10553.764.1|Name=mRNA_S-firma_F_contig10553.764.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=278bp
VPCSHGTESVRLGKDSLRPFDYCCLCTQRIQTVTAPVVSPGGYLFCKECI
YNHLLMQREKLQQQRIAYEAQLEAKAADAARARAATEAAEIKAFEDAEVK
VTSGVGADAFMMHKGPKGEAIRKAIRNQVVLGVHDLRRKDLARTSFWIPE
QTPDAGPDDIAKPDPLPRCPCSGAFLRMKQLVDVKFHESAADVRVGLRYH
CPACLKSLQYQPACVLRKCGHALCAKCTKKFVVPAKRCFVCNMRCKPGKD
IINLKAGETAFASHNSVTTKVYRPTMT*
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mRNA from alignment at S-firma_F_contig10553:173..1292+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10553.764.1 ID=mRNA_S-firma_F_contig10553.764.1|Name=mRNA_S-firma_F_contig10553.764.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1120bp|location=Sequence derived from alignment at S-firma_F_contig10553:173..1292+ (Sphaerotrichia firma ET2_F female)
GTACCCTGCAGCCATGGCACGGAGAGTGTGCGACTGGGCAAGGACTCCCT GCGGCCGTTTGATTACTGCTGCTTGTGTACGCAACGTGTGTGAGGGTTTG TGAGACGCTCACACGTGTGGCGGTTGGCAGGCATCCAAACCGTGACGGCA CCGGTGGTGAGCCCTGGAGGCTACCTGTTTTGCAAGGAGTGCATCTACAA CCACCTCCTCATGCAGCGGGAGAAGCTGCAGCAGCAGCGCATCGCGTACG AAGCCCAGCTGGAGGCCAAGGCTGCGGACGCTGCAAGGGCACGGGCGGCC ACGGAGGCGGCGGAAATTAAGGCGTTTGAGGATGCAGAGGTGAAGGTCAC GTCGGGCGTCGGTGCTGACGCGTTTATGATGCACAAGGGCCCCAAGGGGG AGGTGAAGGGCCCGGGGGCGCACCTGCTTGAGGAAGCAAAGTCAGAGGAG GAGAGGTGTGTATGTTTGCTGGTTGTCTGTTTTCGTGGTGCGCTGGTGGA GGCTCAAGGTGTGTTTTTGTGCAGGGAGGCAATTCGTAAGGCCATCCGGA ACCAGGTGGTGCTAGGCGTCCACGACCTCCGCCGGAAAGACCTTGCACGG ACGTCGTTTTGGATCCCGGAGCAAACACCGGACGCGGGGCCAGACGATAT TGCAAAGCCGGACCCGCTGCCGCGGTGCCCATGCAGTGGCGCCTTCCTCA GAATGAAGCAGCTGGTGGACGTCAAGTTCCACGAGTCTGCAGCGGACGTA CGTGTGGGTTTGCGGTGTTGCATGGTGTTGCGCTCCACCCCCCCCCCCCA ACCACCAGCTGTCTGTGGAGGACGAGGCCGGCGCCGGGGCCTCCAGTGAC GTGCGGGGGAGGGCCAGCCACGTCGGCAGGTACCACTGCCCAGCATGCCT CAAGTCCCTGCAGTACCAGCCTGCCTGTGTGCTGCGTAAGTGCGGGCATG CGCTGTGCGCCAAGTGCACCAAAAAGTTTGTGGTGCCCGCCAAGCGGTGC TTCGTGTGCAACATGAGGTGCAAGCCGGGGAAGGACATTATCAACCTAAA GGCCGGAGAGACGGCGTTTGCGTCCCACAACTCGGTGACAACAAAGGTGT ACAGGCCAACCATGACGTGA
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Coding sequence (CDS) from alignment at S-firma_F_contig10553:173..1292+

>mRNA_S-firma_F_contig10553.764.1 ID=mRNA_S-firma_F_contig10553.764.1|Name=mRNA_S-firma_F_contig10553.764.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1668bp|location=Sequence derived from alignment at S-firma_F_contig10553:173..1292+ (Sphaerotrichia firma ET2_F female)
GTACCCTGCAGCCATGGCACGGAGAGTGTGCGACTGGGCAAGGACTCCCT
GCGGCCGTTTGATTACTGCTGCTTGTGTACGCAACGTACCCTGCAGCCAT
GGCACGGAGAGTGTGCGACTGGGCAAGGACTCCCTGCGGCCGTTTGATTA
CTGCTGCTTGTGTACGCAACGCATCCAAACCGTGACGGCACCGGTGGTGA
GCCCTGGAGGCTACCTGTTTTGCAAGGAGTGCATCTACAACCACCTCCTC
ATGCAGCGGGAGAAGCTGCAGCAGCAGCGCATCGCGTACGAAGCCCAGCT
GGAGGCCAAGGCTGCGGACGCTGCAAGGGCACGGGCGGCCACGGAGGCGG
CGGAAATTAAGGCGTTTGAGGATGCAGAGGTGAAGGTCACGTCGGGCGTC
GGTGCTGACGCGTTTATGATGCACAAGGGCCCCAAGGGGGAGGCATCCAA
ACCGTGACGGCACCGGTGGTGAGCCCTGGAGGCTACCTGTTTTGCAAGGA
GTGCATCTACAACCACCTCCTCATGCAGCGGGAGAAGCTGCAGCAGCAGC
GCATCGCGTACGAAGCCCAGCTGGAGGCCAAGGCTGCGGACGCTGCAAGG
GCACGGGCGGCCACGGAGGCGGCGGAAATTAAGGCGTTTGAGGATGCAGA
GGTGAAGGTCACGTCGGGCGTCGGTGCTGACGCGTTTATGATGCACAAGG
GCCCCAAGGGGGAGGCAATTCGTAAGGCCATCCGGAACCAGGTGGTGCTA
GGCGTCCACGACCTCCGCCGGAAAGACCTTGCACGGACGTCGTTTTGGAT
CCCGGAGCAAACACCGGACGCGGGGCCAGACGATATTGCAAAGCCGGACC
CGCTGCCGCGGTGCCCATGCAGTGGCGCCTTCCTCAGAATGAAGCAGCTG
GTGGACGTCAAGTTCCACGAGTCTGCAGCGGACGTACGTGTGGGTTTGCG
GCAATTCGTAAGGCCATCCGGAACCAGGTGGTGCTAGGCGTCCACGACCT
CCGCCGGAAAGACCTTGCACGGACGTCGTTTTGGATCCCGGAGCAAACAC
CGGACGCGGGGCCAGACGATATTGCAAAGCCGGACCCGCTGCCGCGGTGC
CCATGCAGTGGCGCCTTCCTCAGAATGAAGCAGCTGGTGGACGTCAAGTT
CCACGAGTCTGCAGCGGACGTACGTGTGGGTTTGCGGTACCACTGCCCAG
CATGCCTCAAGTCCCTGCAGTACCAGCCTGCCTGTGTGCTGCGTAAGTGC
GGGCATGCGCTGTGCGCCAAGTGCACCAAAAAGTTTGTGGTGCCCGCCAA
GCGGTGCTTCGTGTGCAACATGAGGTGCAAGCCGGGGAAGGACATTATCA
ACCTAAAGGCCGGAGAGACGGCGTTTGCGTCCCACAACTCGGTGACAACA
AAGGTGTACAGGCCAACCATGACGTGAGTACCACTGCCCAGCATGCCTCA
AGTCCCTGCAGTACCAGCCTGCCTGTGTGCTGCGTAAGTGCGGGCATGCG
CTGTGCGCCAAGTGCACCAAAAAGTTTGTGGTGCCCGCCAAGCGGTGCTT
CGTGTGCAACATGAGGTGCAAGCCGGGGAAGGACATTATCAACCTAAAGG
CCGGAGAGACGGCGTTTGCGTCCCACAACTCGGTGACAACAAAGGTGTAC
AGGCCAACCATGACGTGA
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