prot_S-firma_F_contig1055.760.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1055.760.1
Unique Nameprot_S-firma_F_contig1055.760.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length131
Homology
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BLAST of mRNA_S-firma_F_contig1055.760.1 vs. uniprot
Match: A0A6H5L1F9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F9_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 2.850e-5
Identity = 32/69 (46.38%), Postives = 39/69 (56.52%), Query Frame = 0 
Query:    4 YDAT-MWHQGVDEYGRQFWVNNHTGQATYHLHGGVGGP----PSPQYPMAYQAPSQMGMP-PAGMMAGP 66
            YD T +W Q +D+ G  +W+N HTGQATY L G    P    P+   PM   AP QMG+P P   M GP
Sbjct:    6 YDPTNVWQQAIDQNGFLYWINTHTGQATYQLPGSYPNPMMSYPTHLAPMG-PAPPQMGLPAPHAPMGGP 73
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1055.760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L1F9_9PHAE2.850e-546.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1055contigS-firma_F_contig1055:6809..7548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1055.760.1mRNA_S-firma_F_contig1055.760.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1055 5042..8783 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1055.760.1 ID=prot_S-firma_F_contig1055.760.1|Name=mRNA_S-firma_F_contig1055.760.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=131bp
MNNYDATMWHQGVDEYGRQFWVNNHTGQATYHLHGGVGGPPSPQYPMAYQ
APSQMGMPPAGMMAGPSFQPVREGIYDSKMNPGFATDSSERRRSYLGAAQ
TVGISLLLAAGKVRSTKSNRSKVLGFPYRR*
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