prot_S-firma_F_contig105.696.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig105.696.1
Unique Nameprot_S-firma_F_contig105.696.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length875
Homology
BLAST of mRNA_S-firma_F_contig105.696.1 vs. uniprot
Match: A0A6H5JE26_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE26_9PHAE)

HSP 1 Score: 813 bits (2099), Expect = 3.720e-281
Identity = 417/554 (75.27%), Postives = 473/554 (85.38%), Query Frame = 0
Query:    5 DEADTRAFWDLMQRTTGARSSSWATFSATFETYMRRHYADEMSQLPTATRAEAEMVLRYAFDRGNPARAAAGEQVTPTHLAKFLKRFGPMRSCLLKAARSLFDTSGCLVPWFHGQTSREEAVFAIEEWEASRREGRQQRGVFLFRYSDRQPTISFSYRRRKGDKRIVPVLIDN-GPRGYSLRDKPD--LWRDLQDFVRKMNV-DFVYPVPSALYVECKEEIELRRRAEQFSPTPENQISHARQLYAEAQALVI---RPLDTGVEATRILERALGFVRQVEFILGQLEE--GEPQLQVKALRLGGDILWKLHREEEGVTSYLRCLNVISEAEKLQDAVHEDSPVVTASVLSHLHQLLAEYFLQQGPPGRGLDHFSELMACTTNEDARRQLVNEFRRTDDFHRATAGLTHSNVEAMLDEGISYFRNQDYGPAGEKFKKVLRDARCIGEGKLEARALGNLATVDYKTHLIPAAIRRYKTCVQLLRQQGDQVTERKILNYLVMCCIEAQRWAPANLFHEQLSKLAESEQNIRHLARLKGLIEDGMALQAAQHEGAAPS 549
            DEADTRAFWDL+QRTTGARS+SW TFSATFETY+RRHYA EMSQLP ATRAEAEMVLRYAFDRG+PARAAAGE+V P HLA FL RFGPM+SCL+KAARSLFD SGCLVPWFHG+ SREEA  AIEEWEASR  GR+QRGVFLFRYSD   TI FS+RR+KG++R+V  LI+N G RGY+L D      WRDL++FV +    DF +PVPSAL+ EC EEIE RRRAEQF PTPENQI+HARQL+ +AQ +V    R +  G EATRILE ALG V +VE IL +LE+  G+PQLQ KALRLGGDILWKLHREEEGV SYLRCL+V+SEAEK+ DA H+ SPVVT SVLSH+HQLLAEYFL +G   RGLDHFSEL+ACTT+EDAR+QLV++FRR D F RATAGLT S+V+ +LDEGISYFR QDYGPAG +F+KVLR+ARCIGEG++EARALGNLATVDYKTH IPAAIRRY+TCVQLLRQQG+QVTERKILNYLVMCCIEAQRWAPA LFHEQLSKLAESE+N+ HLARL+  IE+GMALQA Q   AAP+
Sbjct:    4 DEADTRAFWDLVQRTTGARSASWDTFSATFETYLRRHYAAEMSQLPRATRAEAEMVLRYAFDRGSPARAAAGERVAPKHLALFLTRFGPMKSCLIKAARSLFDESGCLVPWFHGKLSREEARRAIEEWEASRGNGREQRGVFLFRYSDWHSTICFSFRRKKGERRLVTCLINNEGRRGYTLPDTSGDGCWRDLREFVAEQRRGDFRHPVPSALHRECVEEIEARRRAEQFVPTPENQIAHARQLFGDAQTMVYSRDRDMKAGFEATRILEGALGLVEKVEHILRELEQDQGDPQLQAKALRLGGDILWKLHREEEGVASYLRCLSVVSEAEKVPDASHDGSPVVTISVLSHIHQLLAEYFLSRGWHERGLDHFSELVACTTDEDARQQLVDDFRRNDGFRRATAGLTQSSVQEVLDEGISYFRCQDYGPAGVRFEKVLRNARCIGEGRMEARALGNLATVDYKTHRIPAAIRRYRTCVQLLRQQGNQVTERKILNYLVMCCIEAQRWAPAKLFHEQLSKLAESEENVLHLARLQERIEEGMALQARQEGDAAPA 557          
BLAST of mRNA_S-firma_F_contig105.696.1 vs. uniprot
Match: D8LBM4_ECTSI (TPR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBM4_ECTSI)

HSP 1 Score: 810 bits (2093), Expect = 1.160e-279
Identity = 416/552 (75.36%), Postives = 470/552 (85.14%), Query Frame = 0
Query:    5 DEADTRAFWDLMQRTTGARSSSWATFSATFETYMRRHYADEMSQLPTATRAEAEMVLRYAFDRGNPARAAAGEQVTPTHLAKFLKRFGPMRSCLLKAARSLFDTSGCLVPWFHGQTSREEAVFAIEEWEASRREGRQQRGVFLFRYSDRQPTISFSYRRRKGDKRIVPVLIDN-GPRGYSLRDKPD--LWRDLQDFVRKMNV-DFVYPVPSALYVECKEEIELRRRAEQFSPTPENQISHARQLYAEAQALVI-RPLDTGVEATRILERALGFVRQVEFILGQLEEGE--PQLQVKALRLGGDILWKLHREEEGVTSYLRCLNVISEAEKLQDAVHEDSPVVTASVLSHLHQLLAEYFLQQGPPGRGLDHFSELMACTTNEDARRQLVNEFRRTDDFHRATAGLTHSNVEAMLDEGISYFRNQDYGPAGEKFKKVLRDARCIGEGKLEARALGNLATVDYKTHLIPAAIRRYKTCVQLLRQQGDQVTERKILNYLVMCCIEAQRWAPANLFHEQLSKLAESEQNIRHLARLKGLIEDGMALQAAQHEGAAPS 549
            DEADTRAFWDLMQRTTGARS+SW TFSATFETY+RR+YA EMSQLP ATRAEAEMVLRYAFDRG+PARAAAGE+V P HLA FL RFGPMRSCL+KAARSLFD SGCLVPWFHG+ SR+EA  AIEEWEASR  GR+QRGVFLFRYSD   TI FS+RR++G++R+V  LI+N G RGY+L D      WRDL++FV +    DF  PVPSAL+ EC EEIE RRRAEQF PTPENQI++ARQL+ EAQ +V  R +  G EATRIL+ ALG V +VE IL +LE+G+  PQLQ KALRLGGDILWKLHREE+GV SYLRCLNV+SEAEK+Q A    SPVVT SVLSH+HQLLAEYFL +G PGRGLDHFSEL+ACTT+EDARRQLV++FRR D F RATAGLT S+V+ +LDEGISYFR QDYGPAG +F+KVLRDARCIGEG++EARALGNLATVDYKTH IPAAIRRY+TCVQLLRQQG+Q TERKILNYLVMCCIEAQRWAPA LFHEQLSKLAESEQN++ L RL+  IE+GMALQA Q   AAP+
Sbjct:    4 DEADTRAFWDLMQRTTGARSASWDTFSATFETYLRRYYAAEMSQLPRATRAEAEMVLRYAFDRGSPARAAAGERVAPKHLALFLTRFGPMRSCLIKAARSLFDESGCLVPWFHGKLSRDEARRAIEEWEASRGNGREQRGVFLFRYSDWHSTICFSFRRKRGERRLVTCLINNEGSRGYTLPDTSGDGCWRDLREFVAEQRRGDFQQPVPSALHRECVEEIEARRRAEQFVPTPENQIAYARQLFGEAQTMVYSRDMKAGFEATRILQEALGLVEKVEHILLELEQGQGDPQLQAKALRLGGDILWKLHREEKGVASYLRCLNVVSEAEKVQGASDHGSPVVTISVLSHVHQLLAEYFLSRGSPGRGLDHFSELVACTTDEDARRQLVDDFRRNDGFQRATAGLTQSSVQEILDEGISYFRCQDYGPAGVRFEKVLRDARCIGEGRMEARALGNLATVDYKTHRIPAAIRRYRTCVQLLRQQGNQATERKILNYLVMCCIEAQRWAPAKLFHEQLSKLAESEQNVQLLGRLQERIEEGMALQARQEGDAAPA 555          
BLAST of mRNA_S-firma_F_contig105.696.1 vs. uniprot
Match: K8YX09_NANGC (Tpr domain-containing protein (Fragment) n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YX09_NANGC)

HSP 1 Score: 99.8 bits (247), Expect = 1.110e-18
Identity = 74/259 (28.57%), Postives = 130/259 (50.19%), Query Frame = 0
Query:  287 EPQLQVKALRLGGDILWKLHREEEGVTSYLRCLNVISEAEKLQDAVHEDSPVVTASVLSHLHQLLAEYFLQQGPPGRGLDHFSELMACTTNEDARRQLVNEFRRTDDFHRATAGLTHSNVEAMLDEGISYFRNQDYGPAGEKFKKVLRDARCI----GEGK--LEARALGNLATVDYKTHLIPAAIRRYKTCVQLLRQQGDQVTERKILNYLVMCCIEAQRWAPANLFHEQLSKLAESEQNIR----HLARLKGLIEDG 535
            E ++Q +A ++ G +L ++   +E    Y   L+V +    LQ A   +        L ++H  LA+++L        L+HF +L+A T +   RR+L+ EF R    H     +T   ++  L++G  ++R + +  A  +F++V++ AR      G+G   +EARALGN ATV         +I  Y+ C +LL +  ++  ER++LN L +  IEA R+  A +  E+L  L E + N+      L  ++  + DG
Sbjct:  103 EARMQARAAKVKGTVLQEMGLMKEASVWYE--LSVRAGRRLLQQAPLSEDLRKYFPSLRYVHNQLAQFYLSVRAFALVLEHFEQLVALTDDAGDRRRLLREFERLSLEHDFWQDVTPGMLDQELEQGRRWYREKCWEEAALQFRRVVQLARLASFSSGDGTRMVEARALGNYATVLKDLRRCDESILAYRLCCRLLEELEEEQMERRMLNGLSLSLIEAHRYEDAAVVCERLLVLTERDDNVELVKTRLEEIQACLRDG 359          
BLAST of mRNA_S-firma_F_contig105.696.1 vs. uniprot
Match: A0A4D9CYM5_9STRA (SH2 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYM5_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.290e-17
Identity = 75/268 (27.99%), Postives = 131/268 (48.88%), Query Frame = 0
Query:  287 EPQLQVKALRLGGDILWKLHREEEGVTSYLRCLNVISEAEKLQDAVHEDSPVVTASVLSHLHQLLAEYFLQQGPPGRGLDHFSELMACTTNEDARRQLVNEFRRTDDFHRATAGLTHSNVEAMLDEGISYFRNQDYGPAGEKFKKVLRDARCI----GEGK--LEARALGNLATVDYKTHLIPAAIRRYKTCVQLLRQQGDQVTERKILNYLVMCCIEAQRWAPANLFHEQLSKLAESEQNI----RHLARLKGLIEDGMALQAAQHE 544
            E ++Q +A ++ G +L ++   +E    Y   L+V +    LQ A   +        L ++H  LA+++L        L+HF +L+A T +   RR L+ EF R    H     +T   ++  L++G  ++R + +  A  +F++V++ AR      G+G   +EARALGN ATV         +I  Y+ C +LL +  ++  ER++LN L +  IEA R+  A +  E+L  L E + N+      L  ++  + DG      + E
Sbjct:  538 EARMQARAAKVKGTVLQEMGLMKEASVWYE--LSVRAGRRLLQQAPLSEDLSKYFPSLRYVHNQLAQFYLSVRAFALVLEHFEQLVALTDDVGDRRLLLREFERLSLEHDFWQDVTPGMLDQELEQGRRWYREKCWEEAALQFRRVVQLARLASFSSGDGTRMVEARALGNYATVLKDLRRCDESILAYRLCCRLLEELEEEQMERRMLNGLSLSLIEAHRYEDAAVVCERLLVLTERDDNVGLVKTRLEEIQACLRDGRRTMERESE 803          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig105.696.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JE26_9PHAE3.720e-28175.27SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LBM4_ECTSI1.160e-27975.36TPR domain-containing protein n=1 Tax=Ectocarpus s... [more]
K8YX09_NANGC1.110e-1828.57Tpr domain-containing protein (Fragment) n=3 Tax=N... [more]
A0A4D9CYM5_9STRA2.290e-1727.99SH2 domain-containing protein n=1 Tax=Nannochlorop... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036860SH2 domain superfamilyGENE3D3.30.505.10coord: 113..220
e-value: 1.4E-5
score: 26.9
IPR036860SH2 domain superfamilySUPERFAMILY55550SH2 domaincoord: 114..200
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 221..544
e-value: 6.7E-12
score: 47.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 406..527
IPR000980SH2 domainPROSITEPS50001SH2coord: 115..199
score: 9.233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig105contigS-firma_F_contig105:10407..18815 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig105.696.1mRNA_S-firma_F_contig105.696.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig105 9861..19061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig105.696.1 ID=prot_S-firma_F_contig105.696.1|Name=mRNA_S-firma_F_contig105.696.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=875bp
METSDEADTRAFWDLMQRTTGARSSSWATFSATFETYMRRHYADEMSQLP
TATRAEAEMVLRYAFDRGNPARAAAGEQVTPTHLAKFLKRFGPMRSCLLK
AARSLFDTSGCLVPWFHGQTSREEAVFAIEEWEASRREGRQQRGVFLFRY
SDRQPTISFSYRRRKGDKRIVPVLIDNGPRGYSLRDKPDLWRDLQDFVRK
MNVDFVYPVPSALYVECKEEIELRRRAEQFSPTPENQISHARQLYAEAQA
LVIRPLDTGVEATRILERALGFVRQVEFILGQLEEGEPQLQVKALRLGGD
ILWKLHREEEGVTSYLRCLNVISEAEKLQDAVHEDSPVVTASVLSHLHQL
LAEYFLQQGPPGRGLDHFSELMACTTNEDARRQLVNEFRRTDDFHRATAG
LTHSNVEAMLDEGISYFRNQDYGPAGEKFKKVLRDARCIGEGKLEARALG
NLATVDYKTHLIPAAIRRYKTCVQLLRQQGDQVTERKILNYLVMCCIEAQ
RWAPANLFHEQLSKLAESEQNIRHLARLKGLIEDGMALQAAQHEGAAPSG
GGGGGGGGGGGGSAATVATTTTTTRGAAAAPADTGGAGSFFPSQGAAPAG
DSYRSYASPRQQGAPTSGSEGVGYDGQPRGAQGASPAGDSYRSYASPRQQ
RAPASGIEGVGYDGHPRGAQGAGAADHRLYVPVRQPGAPTSGSDGVGYDG
QPRVAQGAAPAGDSYRLYASPRQHGAPTSGSEGVGYGGQPRGTQGTAPIG
DAYHRLYAPPRQQGAPTSGTEGVLYDGRPRAAQRTAPISDAYNRLYAPPR
QQGAPSSESESVDHDGQIRGAAPARGGTGLHRVHVRRQQALPARAGGDAD
DYVLVSPDPPPPQPQPHYGPYSNR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000980SH2
IPR011990TPR-like_helical_dom_sf
IPR036860SH2_dom_sf