mRNA_S-firma_F_contig1049.686.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1049.686.1 vs. uniprot
Match: A0A6H5KYH1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH1_9PHAE) HSP 1 Score: 1240 bits (3208), Expect = 0.000e+0 Identity = 946/1794 (52.73%), Postives = 1054/1794 (58.75%), Query Frame = 1
Query: 7 GRGGGGGAPS-TPLALAVGTGLQVVVEELLARGARVDARRAGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSIVDMLLGNDDDEXXXXXXXXXXXXXXXXXXAGTVAGGRTSAVLXXXXXXXXXXXXXXXXXXXXXXXXGSRRHAEERAWDGRTPLHRAATQGHTEVVLRLLSHGVAVDPTDSRGAXXXXXXXXXXXWMAARALARTGGASTLVATDEGDTALHAAAWSGAH----GGTAERVVHLLLDCGAEVDARNRFGSTALHLAAAAADHDSVTLLLSGGANPSVINSCGLSPGACFLRTPDALAAAGNAMN------DVRDVRKTLRQHRERFGHVRRLADTSTKRVAVEAVGDRATVAVHRFVEFALKM--------------QRWDLEARTHRARLRRLDKFRSEILSDP-EQPTSANKNK---SLLLDLSPEREGRAAQAVKRRRKAAAEAVKGAKLALRDLEDWRGSVLAERAAVASFLGLVDPTRAFAAGSFCDGAEAGAGCTGT---------ASSSFEADVVVADPSFLAAEGVAEAGSENA-RLRRHASWAGTGAET-ASSESSPGSXXXXXXRDESVXXXXXXXXXXXXXXGR----RSPAPGVGFLRALAALDPCVSALREAKSSARTGDRLGMALETLREHVKATLIDLMDLETSIPGEALDSDGGEEDAATGAGQSAAASILALSATDAGALDVKVAGLVRRLSGGGGDENGR-----------------ARGPPSLASVYEDGLRGAAEASEAEVDTTESLTARAVRMVTRAVAGPLLWALDDAYQRLTKANIELRRLLPDAEALLGGTDSAEELARGARSRLVTVRQQ--VKDEEDLLKELVSKLGRRRRQGADHDEIRSIDDERLHVSARLAALRSAKLAELKALRRSRAYQRFPELLLDHPNAAERAFRALLLNGVAVRDSDEWKEHHLTSVASLGSTGDGVGGAGTGGGDVGASERTLAGLGGQGCRLAEVDGSAVAIVE--VDCRGRQAERDLVTTLRSFTPASPTLRLPPEVATVSAVSLHEGRVALEVPVEGALTAQAWLATLV-----------QPVVEAAPAAATADGLPDG--TAVAVNLAG-EHSQVEIWAVMLQALRGLAAVHALREGSTHRAVCLANILVAARSGPD------FPAAAAVAETGTPPAAAGLPPSLT-TRQDGFRRAQLGPPAPSALAHPSAGCIAPEVVRGQSFGQPADVYAFGCALRAACCGAQHKDSFFAAGGGGKVDGGSGXXXXXXXX-----------VXXXXXXXXXXXXXXXXXXLLESMLEEDVSHRCTALEALSSDYFRAPPLRSPNPAYPLQWSPFPVRPRRVSNTAPGGQPHWVAVALAGGGLKGD-ASTTDRGWLDSAYIVEVPL----APPGSSSRRGGSRAPELESSRIESLLQRSVPGARLRRLVRVQDRARMLRFVCERDAAVSSXXXXXXXXXXXXTR---------------SSAKVSRLFADPRDVVARDTLTAIAAHSPGASATGXXXXXXKAGLGWTVGGTSV--------PEGSSDDTRARVCG--YGSASSRIVRCVDEARFAAAAFAPPPTEPGGEXXXXXDSS-NLRTLAIVRAIV--------GVPREDVARHGPGGXXXXXXXXXXXXXXXXXXXXXXEEEDPFAGVG--SQLDDLTRVGGIGLSSPPPSLIGGDGGGDDRGLQPAPGLATPEVHSVKTWERVG---EDEVSTGRWRGGGGGGATPVYMLRHNACYPEYLATFSL 4965
G GG GGAP TPLALAV TGLQ VVEELLARGARVD R D LS+VDMLLG D XXXXXXXXX G AG T++ G+RRHAE++ W GRTPLHRAA+ GHTEVVLRLL+HGVAVDPTDSR AXXXXXXXXXXX G AS ATDEGDT LHAAA SG G AAAD DSV LLLS GAN SV+NSCGL PGA FLR P+ AA A V+DVR +R HRER GHVRRLAD S KRVAVEAV D AT +VHRFV+FALK+ QRWDL+AR HR RLRRLDKFRS+ILSDP +QPT+ + N SLLLDLSPERE RAA+ VK R KAAAEA K KLALRDLEDWRG + AERAAV FL DPT A G+ CD A+ G G G + E DVV+ADP FLA E A +++ R RRHASW GTGAE A S S+ G+ + XXXXXXXXXXX R+ P VG LRALAALDPCVSALREA+S+A+TGDRLGMALETLREHVK G + LSA DA +LD KVAGLV RLSGGG + +RG PSLASVY+DGLRGAA ASEAEVD TESLTARA+ MV A AGPLLWALDDAYQ A++ELRRLLPDAEALLGG SA E+AR ARSRLV+VRQQ V DEEDLLKEL S+LGRRRRQ AD +EIRSIDDERLH ARLAALRSAKLAELKALRRS AY+RFPELLL+HP+ AERAFR+LLL+GV +RD DEW++HHL SVAS G AG ER LAGLGG GCRLAE+DGSAVAIVE V CR RQAERDLV + F P + RLPPEVA VS VSL EG+ LEV VEGALTA+AWLA P EA PA A+ P AVAV+ A E QVE+WAVM+QAL GLAAVHA+ E S HRAVCL NILVAARS P+ P A E P + G S + Q GFRRA+LGPP P+ALA PSAGCIAPEVVRGQ FGQPADVYAFGCALRAACCGA+H +SF+A XXXXXXXX + LL+SMLEED S RCT LEALSSDYFRA PLR PNPAYPLQWSPFPVR R S+TAPG QPHWVAVALA GGLKGD AS DR W DS Y VEVPL A PG + GG E SR+E+LL+ S+P ARL RLVR+QDRARMLRFVC RDAA+SS XXXXXXXXXXX + V+RLFADPRDVVA D LTAI+ ++T WTVGGT +DD RAR G A + R ARFAA A A P E + S LRTLA+VRA+V G RE GG ++ DPF + +++DDLTRV GIGLSSPPPS+ G G+ R L+PAPGL++P VHS+ WE V VY +R ACYPEYLATF+L
Sbjct: 123 GVGGAGGAPPPTPLALAVVTGLQRVVEELLARGARVDTPRPEDGWTALHLCAARGDALMMEVLLRAPLADAGARTSQLETPLSVASSRGHLSVVDMLLGGD-----------XXXXXXXXXTGGEPAGKPTAS-----------DPPSVSAATGATGNRGARRHAEDKTWAGRTPLHRAASAGHTEVVLRLLAHGVAVDPTDSRRAXXXXXXXXXXXXXXXXXXXXEGKASVAAATDEGDTVLHAAAGSGTPPCGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAADLDSVALLLSAGANASVVNSCGLCPGAGFLRPPNGGAAIATATTYTGSSERVKDVRWMIRGHRERLGHVRRLADASAKRVAVEAVADGATASVHRFVDFALKVPMLVVGTQRETWTVQRWDLDARNHRTRLRRLDKFRSDILSDPPKQPTAVDGNNGGNSLLLDLSPERESRAARVVKGRTKAAAEATKEGKLALRDLEDWRGRISAERAAVEHFLRGADPTLALVPGASCDAAD-GEGLGGWDPGGLYRPGGRAGCEVDVVIADPGFLAGEADGRAANDSGGRSRRHASWTGTGAEVIAPSRSTVGAAGAAFAEGDGSRRGXXXXXXXXXXXXXXHRSRAQQPAVGPLRALAALDPCVSALREARSAAKTGDRLGMALETLREHVKGR--------AGGRGGXXXXXXXXXXXXXXXXXXXXGPAVELSAADASSLDAKVAGLVSRLSGGGDADXXXXXXXXXXXXXXXXXXXXSRGSPSLASVYKDGLRGAAAASEAEVDATESLTARALGMVITAAAGPLLWALDDAYQA---AHLELRRLLPDAEALLGGAGSAGEVAREARSRLVSVRQQASVVDEEDLLKELESRLGRRRRQAADAEEIRSIDDERLHARARLAALRSAKLAELKALRRSGAYRRFPELLLEHPDPAERAFRSLLLSGVELRDVDEWEDHHLASVASS------AGAAGPERASSEVGERVLAGLGGVGCRLAEIDGSAVAIVEASVGCRDRQAERDLVADILHFIPRA--RRLPPEVAVVSGVSLQEGKALLEVNVEGALTAKAWLAASATAGTVDGKPVDHPGTEAEPAVDGAEDAPAPKVAAVAVDSASSERFQVEVWAVMIQALAGLAAVHAVSERSVHRAVCLDNILVAARSSPESPPGRLLPLAGGGGEGAVAPNSDGSSSSSDPSGQHGFRRAKLGPPFPAALARPSAGCIAPEVVRGQEFGQPADVYAFGCALRAACCGAKHAESFYATASXXXXXXXXXXXXXXXXXXXXXXXXXXELLLPVGLGPAFEPLREALAQLLDSMLEEDPSRRCTVLEALSSDYFRALPLRGPNPAYPLQWSPFPVRTRSFSSTAPGSQPHWVAVALAAGGLKGDYASALDRHWFDSTYAVEVPLLATAAVPGGACTEGG------EGSRVEALLRSSLPEARLVRLVRLQDRARMLRFVCIRDAAISSAXXXXXXXXXXXXXXXGFPNXXXXXXGRVGNVSVARLFADPRDVVADDALTAISTSGSDPASTVRGRPDC-----WTVGGTMAVTMTAAEEDPRDNDDARARGAGGPVSKAGEDLCRLAASARFAAVALAQPQVERRDDGGRGGGKSMTLRTLAVVRAVVSGDPEEHPGWRREGTCSDSEGGGEAGGSASGNGWLQSAAAAVGRDKMDPFLDMDCMAKVDDLTRVAGIGLSSPPPSVADAGGSGN-RTLEPAPGLSSPAVHSITGWEAVSGXXXXXXXXXXXXXXXXXXTAAVYTVRREACYPEYLATFAL 1862
BLAST of mRNA_S-firma_F_contig1049.686.1 vs. uniprot
Match: D8LGZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ1_ECTSI) HSP 1 Score: 316 bits (810), Expect = 7.710e-92 Identity = 243/472 (51.48%), Postives = 274/472 (58.05%), Query Frame = 1
Query: 3700 MLEEDVSHRCTALEALSSDYFRAPPLRSPNPAYPLQWSPFPVRPRRVSNTAPGGQPHWVAVALAGGGLKGD-ASTTDRGWLDSAYIVEVPL---APPGSSSRRGGSRAPELESSRIESLLQRSVPGARLRRLVRVQDRARMLRFVCERDAAVSSXXXXXXXXXXXXTR-------------------SSAKVSRLFADPRDVVARDTLTAIAAH-SPGASATGXXXXXXKAGLG-WTVGGTSVP------EGSSDDTRARVCGYGSASSR----IVRCVDEARFAAAAFAPPPTEPGGEXXXXXDSS-NLRTLAIVRAIV-GVPREDVARHGPG--------GXXXXXXXXXXXXXXXXXXXXXXEEEDPFAGVG--SQLDDLTRVGGIGLSSPPPSLIGGDGGGDDRGLQPAPGLATPEVHSVKTWERVG---EDEVSTGRWRGGGGGGATPVYMLRHNACYPEYLATFSL 4965
MLEED S RCT LEALSSDYFRA PLR PNPAYPLQWSPFPVR R S+TAPGGQPHWVAVALA GGLKGD AS DR W DS Y VEVPL A PG + GG E SR+E+LL+ S+PGARL RLVR+QDRARMLRFVC+RDAA+SS XXXXXXXXXX V+RLFADPRDVVA D LTAI+ S ASAT + G G WTVGGT+ E D+ ARV G G S+ + R ARFAA A A P E E S LRTLA+VRAIV G P E G XXXXXXXX ++ DPF + +++DDLTRV GIGLSSPPPS+ G G+ R L+PAPGL++P VHS+ WE V VY +R ACYPEYLATF+L
Sbjct: 1 MLEEDPSRRCTVLEALSSDYFRALPLRGPNPAYPLQWSPFPVRTRSFSSTAPGGQPHWVAVALAAGGLKGDYASALDRHWFDSTYAVEVPLLAAAVPGGACSEGG------EGSRVEALLRSSLPGARLVRLVRLQDRARMLRFVCDRDAAISSAAXXXXXXXXXXXXXPGFPNTGXXXXXXXXXSVGRVSVARLFADPRDVVAGDALTAISTSGSDPASAT-------RGGPGCWTVGGTAATTTPAAEEDLRDNDDARVRGAGGPVSKAGRDLCRLAASARFAAVALAQPQIERRDEGGRGGGKSMTLRTLAVVRAIVSGDPEEHPGWRREGTCSGSEXXXXXXXXXXXNGWLQSVAAAAVDRDKMDPFLDIDCMAKVDDLTRVAGIGLSSPPPSVADAGGSGN-RTLEPAPGLSSPAVHSITDWEAVSGXXXXXXXXXXXXXXXXXXTAAVYTVRREACYPEYLATFAL 458
BLAST of mRNA_S-firma_F_contig1049.686.1 vs. uniprot
Match: A0A6U0I3R1_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A6U0I3R1_MICPS) HSP 1 Score: 65.5 bits (158), Expect = 1.900e-7 Identity = 50/131 (38.17%), Postives = 63/131 (48.09%), Query Frame = 1
Query: 514 DGRTPLHRAATQGHTEVVLRLLSHGVAVDPTDSRGAXXXXXXXXXXXWMAARALARTGGASTLVATDEGDTALHAAAWSGAHGGTAERVVHLLLDCGAEVDARNRFGSTALHLAAAAADHDSVTLLLSGGA 906
DG TPLH AA +G V+ LL+ G VD DS G + AL R G AS + + GDTALH AA + + L+ GA+ DARN+ G+T L LA+ A V LL GA
Sbjct: 41 DGATPLHHAAEEGDDVVIEALLAIGADVDEVDSEGQTALMLAASWGHPSSVNALIRVGNASINLKDEGGDTALHEAARA-----NELETLSQLISLGADKDARNKLGATPLLLASHAGHKRIVVALLDAGA 166
BLAST of mRNA_S-firma_F_contig1049.686.1 vs. uniprot
Match: A0A010S0E3_9PEZI (SesA domain-containing protein n=1 Tax=Colletotrichum fioriniae PJ7 TaxID=1445577 RepID=A0A010S0E3_9PEZI) HSP 1 Score: 63.2 bits (152), Expect = 5.380e-6 Identity = 48/141 (34.04%), Postives = 68/141 (48.23%), Query Frame = 1
Query: 520 RTPLHRAATQGHTEVVLRLLSHGVAVDPTDSRGAXXXXXXXXXXXWMAARALARTGGASTLVATDEGDTALHAAAWSGAHGGTAERVVHLLLDCGAEVDARNRFGSTALHLAAAAADHDSVTLLLSGGANPSVINSCGLSP 942
RTPLH AA+ G +V LLSH +D +G + A L + G ++ T++ TALH AAW+G + +V +L+ GAE+DA++R G TA HLA A V L +N GL+P
Sbjct: 958 RTPLHEAASWGSLPIVEMLLSHDAHIDAQTRKGQTPLYLSILQDHFSVAELLVKKGANLRILNTNKRWTALHLAAWAG-----SLVIVEMLISNGAEIDAQDRQGYTAQHLALQAGHGGIVDCLRMNRSNTQHPKPEGLNP 1093 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1049.686.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1049.686.1 >prot_S-firma_F_contig1049.686.1 ID=prot_S-firma_F_contig1049.686.1|Name=mRNA_S-firma_F_contig1049.686.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=1656bp IAGRGGGGGAPSTPLALAVGTGLQVVVEELLARGARVDARRAGDASTPLHback to top mRNA from alignment at S-firma_F_contig1049:6978..14090- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1049.686.1 ID=mRNA_S-firma_F_contig1049.686.1|Name=mRNA_S-firma_F_contig1049.686.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=7113bp|location=Sequence derived from alignment at S-firma_F_contig1049:6978..14090- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1049:6978..14090- >mRNA_S-firma_F_contig1049.686.1 ID=mRNA_S-firma_F_contig1049.686.1|Name=mRNA_S-firma_F_contig1049.686.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=9936bp|location=Sequence derived from alignment at S-firma_F_contig1049:6978..14090- (Sphaerotrichia firma ET2_F female)back to top |