prot_S-firma_F_contig1048.674.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1048.674.1
Unique Nameprot_S-firma_F_contig1048.674.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length520
Homology
BLAST of mRNA_S-firma_F_contig1048.674.1 vs. uniprot
Match: A0A6H5LIM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIM4_9PHAE)

HSP 1 Score: 330 bits (847), Expect = 2.890e-102
Identity = 163/288 (56.60%), Postives = 221/288 (76.74%), Query Frame = 0
Query:  183 GDEPPSKKAKTANGASAKKPTPARQPRMSGDPKGKEIFIDNLPATATEEAVKELAADVGGEVISVRVMMSKDEEPKCTGLALVRFKEREFAAKALKSIPDQELDGNKLEARPSSNVNTLFIGSLSKNWTKEMVLKEFEEKLEGVVNFEVAPDNIGHNVNRGFGFCTFKDQEACKAAHSKHESIKLEILDTPVVLHWAESKGGREEDESGVYLSNVVEDVTSDFIRKELGRFGEIKEVVLGADNPNNKRKDFVIIKFIKPDSAAACIESINGTDMKGRKVTAVKAQAKR 470
            GDEPP+KKAKTANGASA K   A +P++SGDP GKEIFIDNLP +ATEE VK++A + GGEV+S+RV+M+KDEEPKC GLALVRF+ R+ AA+AL+ +P+ +++ NKLEARPSSN NTLFIG+L+K WTKE VLKEFE++++G+VNFEV  D +  N+NRGFGF TFKD ++CKAAH+K+   KL IL+  V++ WAE++G +++DE GVY++ + E V    +RK  G +G I +VV+G      +RKDF II +   D+A  CIES++GTD   +K+    A++KR
Sbjct:  180 GDEPPTKKAKTANGASAAKKD-APKPKVSGDPSGKEIFIDNLPPSATEETVKKVAEEEGGEVVSMRVIMTKDEEPKCAGLALVRFQNRDHAARALERLPETKMESNKLEARPSSNANTLFIGNLNKTWTKETVLKEFEKEVDGIVNFEVTMDALNKNLNRGFGFATFKDVDSCKAAHTKYYKDKLTILENKVLIDWAETRGNKQDDERGVYITGLDEKVDEAALRKHFGSYGTIVKVVVGNQVGTAQRKDFAIINYSTADAAKTCIESMHGTDFMDKKLEVTMAKSKR 466          
BLAST of mRNA_S-firma_F_contig1048.674.1 vs. uniprot
Match: D7FTF9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTF9_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 2.000e-95
Identity = 165/328 (50.30%), Postives = 224/328 (68.29%), Query Frame = 0
Query:  183 GDEPPSKKAKTANGASAKKPTPARQPRMSGDPKGKEIFIDNLPATATEEAVKELAADVGGEVISVRVMMSKDEEPKCTGLALVRFKEREFAAKALKSIPDQELDGNKLEARPSSNVNTLFIGSLSKNWTK----------------------------EMVLKEFEEKLEGVVNFEVAPDNIGHNVNRGFGFCTFKDQEACKAAHSKHESIKLEILDTPVVLHWAESKGGREEDESGVYLSNVVEDVTSDFIRKELGRFGEIKEVVLGADNPNNKRKDFVIIKFIKPDSAAACIESINGTDMKG---------RKVTAVKAQAKRRRE 473
            GDEPP+KKAKTANGASA K   A +P++SGDP GKEIFIDNLP +ATEE VK++A + GGEV+S+RVMM+KDEEPKC GLALVRF+ R+ AA+AL+ +P+ +++ NKLEAR SSN NTLFIG+L+K WTK                            E VLKEFE++++G+VNFEV  D +  N+NRGFGF TFKD ++CKAAH+K+   KL IL+  V++ WAE++G +++DE GVY++ + E V    +RK  G +G I +VV+G      +RKDF II +   ++A  CIES++GTD  G         RK+    A++KR+R+
Sbjct:  217 GDEPPTKKAKTANGASAAKKD-APKPKVSGDPSGKEIFIDNLPPSATEETVKKVAEEQGGEVVSMRVMMTKDEEPKCAGLALVRFQNRDHAARALERLPEIKMESNKLEARSSSNANTLFIGNLNKTWTKXXXXXXXXXXXXXXXXXXXXXXXXXXKKETVLKEFEKEVDGIVNFEVTMDALNKNLNRGFGFATFKDVDSCKAAHAKYYKDKLTILENKVLIDWAETRGNKQDDERGVYITGLDEKVDEAGLRKHFGSYGTIVKVVVGNQVGTAQRKDFAIINYSAAEAAKTCIESMHGTDFMGKLTVTSPAGRKLEVTMAKSKRKRD 543          
BLAST of mRNA_S-firma_F_contig1048.674.1 vs. uniprot
Match: A0A388JQ19_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JQ19_CHABU)

HSP 1 Score: 123 bits (308), Expect = 1.830e-26
Identity = 77/267 (28.84%), Postives = 134/267 (50.19%), Query Frame = 0
Query:  204 PARQPRMSGDP-----KGKEIFIDNLPATATEEAVKELAADVGGEVISVRVMMSKDEEPKCTGLALVRFKEREFAAKALKSIPDQELDGNKLEARPSSNVNTLFIGSLSKNWTKEMVLKEFEEKLEGVVNFEVAPDNIGHNVNRGFGFCTFKDQEACKAAHSKHESIKLEILDTPVVLHWAESKGGREEDESG------VYLSNVVEDVTSDFIRKELGRFGEIKEVVLGADNPNNKRKDFVIIKFIKPDSAAACIESINGTDMKGR 459
            PA +  +S DP      G E+F+  +    +++ V+E     G EV  VR+++ + E  +C G   V F  +E A KA++++ + E  G K+   PS + + LFIG++ K WTKE +LK   ++  G+ + ++  D    + NRGF F  + +  A + A          +      +++AE++   E D +       VY+ N+ E VT D++RK   + GEI +++L    P   ++DF  I F +  SA A I+     ++ GR
Sbjct:  119 PATKKEVSKDPLDRPPHGSEVFLGGIGRDVSDDEVREFCLPCG-EVYEVRLVVDR-ETGQCKGYGFVTFMNKESAQKAIETLNETEFKGKKIRVTPSQSKHRLFIGNIPKLWTKEELLKALSDESAGIESVDLLQDPSNPHKNRGFAFVEYYNHAAAEQARRVLSKQSFLLGGRTPTVNYAENR--TEPDAAAMAQVKVVYVRNLPESVTEDYLRKLFEKHGEITKIILPIPKPGQPKRDFGFIHFAERSSAVAAIDKDEKYEVDGR 381          
BLAST of mRNA_S-firma_F_contig1048.674.1 vs. uniprot
Match: UPI001CC693B8 (heterogeneous nuclear ribonucleoprotein R-like isoform X1 n=2 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC693B8)

HSP 1 Score: 114 bits (284), Expect = 5.580e-23
Identity = 86/272 (31.62%), Postives = 135/272 (49.63%), Query Frame = 0
Query:  218 EIFIDNLPATATEEAVKELAADVGGEVISVRVMMSKDEEPKCTGLALVRFKEREFAAKALKSIPDQELDGNKLEARPSSNVNTLFIGSLSKNWTKEMVLKEFEEKLEGVVNFE---VAPDNIGHNVNRGFGFCTFKDQ----EACK------AAHSKHESIKLEILDTPVVLHWAESKGGREEDESGVYLSNVVEDVTSDFIRKELGRFGEIKEVVLGADNPNNKRKDFVIIKFIKPDSAAACIESINGTDMK-GRKVTAVKAQAKRRRESG 475
            E+F+  L   ATEE ++++   VG EV  VR+MM+     K  G A +RF   E A +A+  +    ++G +    PS + +TLF+G++ K WTKE  LKE +  L GV +FE   +  D+    +NRGF F  F  +    +ACK             + K+   DT     + E           +++  +      D +R+ L ++G+I++V L  + P  KR DF  + F   DSA AC+E IN T++  G K   V+A+  R R+ G
Sbjct:  163 EVFVGGLDRDATEEDLRKVFIQVG-EVTEVRLMMNPMTH-KNKGFAFIRFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKE-ALKE-KLSLYGVDSFEDLTLVEDSKNEGMNRGFAFLDFPSRADALDACKRLQRMDVVFGTDRTAKVAFADT-----FIEPDDEIMSQVKTIFIDGLPPAWDEDRVREPLKKYGKIEKVELARNMPAAKRTDFGFVTFDTHDSAVACVEGINNTELHDGDKKVKVRARLSRPRQRG 425          
BLAST of mRNA_S-firma_F_contig1048.674.1 vs. uniprot
Match: A0A8J5LX52_ZINOF (Uncharacterized protein n=7 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LX52_ZINOF)

HSP 1 Score: 112 bits (279), Expect = 2.450e-22
Identity = 74/244 (30.33%), Postives = 116/244 (47.54%), Query Frame = 0
Query:  218 EIFIDNLPATATEEAVKELAADVGGEVISVRVMMSKDEEPKCTGLALVRFKEREFAAKALKSIPDQELDGNKLEARPSSNVNTLFIGSLSKNWTKEMVLKEFEE-KLEGVVNFEVAPDNIGHNVNRGFGFCTFKDQEACKAAHSKHESIKLEILDTPVVLHWAESKGGREEDE----------SGVYLSNVVEDVTSDFIRKELGRFGEIKEVVLGADNPNNKRKDFVIIKFIKPDSAAACIES 450
            EIFI  L   A EE +K++   VG E++ VR+MM   +  K  G A +R+K+   A KA+   P  E+ G    A      +T+++GS+ K+W KE V+K  ++  +E +    V PD    + NRGF F   +       A+ K +   +      + + WAE      E+E            VY+  +        +R+  G+FGEI+ +V   D    KRKDF  + F   ++A +CIES
Sbjct:  336 EIFIGGLSRDAKEEDLKKVFGKVG-EIVEVRLMMD-GQTRKNKGYAFLRYKDPAHAKKAVSEFPRVEICGKLCGAAALEGNDTIYLGSIDKDWKKEDVMKILQDIGIEKIDTVTVMPDPHNADANRGFAFLELETNRDAHIAYRKLQKKDVFGKGRNISVSWAEPLNDPNEEELKKVSLSFLVKSVYVEGIPSSWNESKLRELFGKFGEIERIVHSRDIHTAKRKDFAFVNFTVREAALSCIES 577          
BLAST of mRNA_S-firma_F_contig1048.674.1 vs. uniprot
Match: A0A2I0WI65_9ASPA (Polyadenylate-binding protein 2 n=3 Tax=Epidendroideae TaxID=158332 RepID=A0A2I0WI65_9ASPA)

HSP 1 Score: 109 bits (272), Expect = 6.510e-22
Identity = 75/267 (28.09%), Postives = 128/267 (47.94%), Query Frame = 0
Query:  214 PKGKEIFIDNLPATATEEAVKELAADVGGEVISVRVMMSKDEEPKCTGLALVRFKEREFAAKALKSIPDQELDGNKLEARPSSNVNTLFIGSLSKNWTKEMVLKEFEEKLEGVVNFEVAPDNIGHNVNRGFGFCTFKDQEACKAAHSKHESIKLEILDTPVVLHWAESKGGREEDESG----VYLSNVVEDVTSDFIRKELGRFGEIKEVVLGADNPNNKRKDFVIIKFIKPDSAAACIESINGTDMKGR--KVTAVKAQAKRRRES 474
            P G E+F+  LP   T+E +++L    G E+  VR++  KD++ +  G A + F  ++ A  A++ I D++  G  L    S   + LFIG++ K+  +E + +  EE   GV N E   D    + NRGF F  + +      A  K      +I  +   + WA+ K   +   +     +Y+ N+ E VTS+ +++   R GEI +VVL       KR DF  + F +  SA   ++     ++ G   +V+  K Q  ++ ES
Sbjct:  109 PHGSEVFVGGLPRDVTDEELRDLCESFG-EIYEVRLVKDKDKK-ESKGFAFIVFTTKDAAQMAVEEIQDKDFKGRTLRCSLSQVKHRLFIGNVPKSLAEEELKRILEETGPGVENIECFKDPQNPSRNRGFVFVEYYNNACADYARQKMSRSNFKIDGSTPTVSWADPKNSADASAAAQVKAIYVKNLPESVTSEKLKENFERHGEITKVVLPPAKAGQKR-DFGFVHFAERSSALKAVKGTEKYEIDGHTIEVSLAKPQTDKKSES 372          
BLAST of mRNA_S-firma_F_contig1048.674.1 vs. uniprot
Match: UPI001C4EDC8E (heterogeneous nuclear ribonucleoprotein Q-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4EDC8E)

HSP 1 Score: 109 bits (273), Expect = 1.320e-21
Identity = 85/272 (31.25%), Postives = 135/272 (49.63%), Query Frame = 0
Query:  218 EIFIDNLPATATEEAVKELAADVGGEVISVRVMMSKDEEPKCTGLALVRFKEREFAAKALKSIPDQELDGNKLEARPSSNVNTLFIGSLSKNWTKEMVLKEFEEKLEGVVNFE---VAPDNIGHNVNRGFGFCTFKDQ----EACKAAHSKH------ESIKLEILDTPVVLHWAESKGGREEDESGVYLSNVVEDVTSDFIRKELGRFGEIKEVVLGADNPNNKRKDFVIIKFIKPDSAAACIESINGTDMK-GRKVTAVKAQAKRRRESG 475
            E+FI  L   ATE+ ++++ + VG EV  VR+M +     K  G A +RF   E A +A+  +    ++G +    PS + +TLF+G++ K WTKE  LKE +  L GV NFE   +  D     +NRGF F  F  +    +ACK    +        + K+   DT     + E           +++  +      D +R+ L ++G+I++V L  + P  KR DF  + F   +SA AC+E IN T++  G K   V+A+  R R+ G
Sbjct:  158 EVFIGGLDRDATEDDLRKVFSQVG-EVTEVRLMKNPMTH-KNKGFAFLRFATVEQARRAITELKHPTVNGKQCGVSPSQDSDTLFLGNICKMWTKE-ALKE-KLALYGVDNFEDLTLVEDTKNEGMNRGFAFLDFPSRADALDACKRLQRRDVVFGTDRTAKVAFADT-----FIEPDDEIMSQVKTIFVDGLPPTWDEDRVREHLKKYGKIEKVELARNMPAAKRTDFGFVTFDTHESAVACVEDINNTELHDGDKKVKVRARLSRPRQRG 420          
BLAST of mRNA_S-firma_F_contig1048.674.1 vs. uniprot
Match: A0A1D1YM63_9ARAE (Heterogeneous nuclear ribonucleoprotein Q (Fragment) n=2 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YM63_9ARAE)

HSP 1 Score: 108 bits (271), Expect = 1.700e-21
Identity = 80/265 (30.19%), Postives = 133/265 (50.19%), Query Frame = 0
Query:  218 EIFIDNLPATATEEAVKELAADVGGEVISVRVMMSKDEEPKCTGLALVRFKEREFAAKALKSIPDQELDGNKLEARPSSNVNTLFIGSLSKNWTKEMVLKEFEEK-LEGVVNFEVAPDNIGHNVNRGFGFCTFKDQ-EACKAAHSKHESIKLEILDTPVVLHWAES----KGGREEDESGVYLSNVVEDVTSDFIRKELGRFGEIKEVVLGADNPNNKRKDFVIIKFIKPDSAAACIESINGTDM-KGRKVTAVKAQAKRRRESG 475
            E+F+  L   ATEE +K++  +VG EV  VR +M   +  K  G A +RF   E A +A+  + +  ++G +    PS + +TLF+G++SK WTKE +  + ++  +E + +  +  D+     NRGF F  F  + EA  A     +   L  +D    + +AES         +    V++  +      + +R+ L  FG+I+ V L  + P+ +RKDF  + F   DSA  C E IN  D+ +G K   V+A+  R  + G
Sbjct:   23 EVFVGGLDNDATEEDLKKVFTEVG-EVKEVR-LMKNPQTKKNKGFAFLRFATVEQAKRAVAELKNPVINGKQCGVSPSLDNDTLFVGNISKTWTKEHLKDKLKQYGVENIEDLTLVEDSNNEGNNRGFAFLEFSSRKEAMDAFRRLRKRDVLFGVDRNAKVSFAESFILPNDEIMKQVKTVFVDGLPVAWDEERVRESLKEFGQIERVELARNMPSARRKDFGFVTFDTHDSAVKCSEGINNADLGEGDKKVKVRARLSRPLQKG 285          
BLAST of mRNA_S-firma_F_contig1048.674.1 vs. uniprot
Match: W1P4L8_AMBTC (Uncharacterized protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=W1P4L8_AMBTC)

HSP 1 Score: 108 bits (270), Expect = 3.290e-21
Identity = 70/249 (28.11%), Postives = 125/249 (50.20%), Query Frame = 0
Query:  215 KGKEIFIDNLPATATEEAVKELAADVGGEVISVRVMMSKDEEPKCTGLALVRFKEREFAAKALKSIPDQELDGNKLEARPSSNVNTLFIGSLSKNWTKEMVLKEFEEK-LEGVVNFEVAPDNIGHNVNRGFGFCTFKDQEACKAAHSKHESIKLEILDTPVVLHWAESKGGREEDES------GVYLSNVVEDVTSDFIRKELGRFGEIKEVVLGADNPNNKRKDFVIIKFIKPDSAAACIESINGTDM 456
            K +EIF+  L   A E+ +K+    +G EV+ VR++ +     K  G A V+F  +E A++A+  + +  + G +    PS + +TLF+G++   WTKE + K+  E  ++GV    +  D     +++GF F  F        A+ + +   +           A ++  RE D+        V++  +      D +R+++  +GEI+ VVL  + P  KR+DF  + F   DSA ACIE++N T++
Sbjct:  252 KEQEIFVGGLDKDAVEDDLKKAFEKIG-EVVEVRLLKNHITN-KNKGFAFVKFATKEQASRAVSELKNPVIRGKRCGVAPSEDNDTLFLGNICNTWTKEAIKKKLMEYGVDGVETITLVADPQHEGLSKGFAFVEFSCHMDAMNAYKRLQQPDVIFGHPERTAKVAFAEPLREPDQEVMAQVKSVFVDGLPPHWDEDRVREQMKYYGEIERVVLARNMPTAKRRDFGFVNFTTHDSAVACIEALNSTEL 498          
BLAST of mRNA_S-firma_F_contig1048.674.1 vs. uniprot
Match: A0A8K0MH84_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0MH84_9ROSA)

HSP 1 Score: 104 bits (259), Expect = 7.740e-20
Identity = 68/245 (27.76%), Postives = 126/245 (51.43%), Query Frame = 0
Query:  218 EIFIDNLPATATEEAVKELAADVGGEVISVRVMMSKDEEPKCTGLALVRFKEREFAAKALKSIPDQELDGNKLEARPSSNVNTLFIGSLSKNWTKEMVLKEFEEK-LEGVVNFEVAPDNIGHNVNRGFGFCTFKDQEACKAAHSKHESIKLEI-LDTPVVLHWAES--KGGRE--EDESGVYLSNVVEDVTSDFIRKELGRFGEIKEVVLGADNPNNKRKDFVIIKFIKPDSAAACIESINGTDM 456
            E+F+  L   ATE+ +++    VG EV  VR+MM+   + K  G A +RF   E A +A+  + +  ++G +    PS + +TLF+G++SK WT+  + ++ +   ++ V +  +  D+    +NRGF F  F  +     A  + +   +   +D P  + +A+S    G E       V++  +      D + + L ++GEI+++ L  + P+ KRKDF  + F   D+A  C +SIN  ++
Sbjct:  219 EVFVGGLDKDATEDDLRKAFTAVG-EVTEVRLMMNPQTK-KNKGFAFLRFATVEQAKRAVTELKNPVINGKQCGVTPSQDSDTLFLGNISKAWTRNTLKEKLKHYGVDNVEDLTLVEDSNNEGMNRGFAFLEFSTRSDAMDAFKRLQKRDIMFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGLPASWDEDLVGELLKKYGEIEKIELARNMPSAKRKDFGFVTFDSHDAAVTCAKSINNAEL 461          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1048.674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LIM4_9PHAE2.890e-10256.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTF9_ECTSI2.000e-9550.30Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A388JQ19_CHABU1.830e-2628.84Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
UPI001CC693B85.580e-2331.62heterogeneous nuclear ribonucleoprotein R-like iso... [more]
A0A8J5LX52_ZINOF2.450e-2230.33Uncharacterized protein n=7 Tax=Zingiber officinal... [more]
A0A2I0WI65_9ASPA6.510e-2228.09Polyadenylate-binding protein 2 n=3 Tax=Epidendroi... [more]
UPI001C4EDC8E1.320e-2131.25heterogeneous nuclear ribonucleoprotein Q-like n=1... [more]
A0A1D1YM63_9ARAE1.700e-2130.19Heterogeneous nuclear ribonucleoprotein Q (Fragmen... [more]
W1P4L8_AMBTC3.290e-2128.11Uncharacterized protein n=2 Tax=Amborella trichopo... [more]
A0A8K0MH84_9ROSA7.740e-2027.76Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 8..42
e-value: 2.6E-9
score: 46.9
IPR003034SAP domainPFAMPF02037SAPcoord: 10..41
e-value: 8.3E-12
score: 44.6
IPR003034SAP domainPROSITEPS50800SAPcoord: 8..42
score: 10.426
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 300..377
e-value: 1.5E-10
score: 51.1
coord: 218..293
e-value: 2.7E-9
score: 46.9
coord: 391..464
e-value: 3.8E-9
score: 46.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 219..290
e-value: 2.3E-10
score: 40.1
coord: 301..360
e-value: 7.1E-8
score: 32.2
coord: 392..461
e-value: 4.3E-10
score: 39.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 390..468
score: 12.799
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 299..381
score: 11.247
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 217..297
score: 13.669
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 391..464
e-value: 0.0031
score: 26.7
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 381..486
e-value: 8.2E-15
score: 56.9
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 299..380
e-value: 6.1E-13
score: 50.7
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 180..294
e-value: 5.4E-15
score: 57.4
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 9..53
e-value: 5.2E-12
score: 47.2
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 8..42
NoneNo IPR availablePANTHERPTHR21245FAMILY NOT NAMEDcoord: 59..508
NoneNo IPR availablePANTHERPTHR21245:SF10SYNCRIP, ISOFORM Qcoord: 59..508
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 388..498
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 216..382

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1048contigS-firma_F_contig1048:14220..24430 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1048.674.1mRNA_S-firma_F_contig1048.674.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1048 14220..24555 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1048.674.1 ID=prot_S-firma_F_contig1048.674.1|Name=mRNA_S-firma_F_contig1048.674.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=520bp
MTLTPQKARAMTVPKIKEELTERGLDTTGKKAVLVERLLAHAADEKAEPE
PEEEEEEEALSETEEPEAAAEPAAAAEPETPAEPEAAAEPEPEAAAEPEA
EVVKAEDAAEEGGSADKDGGSADSNAEEAKKVKDENEGEGGEEEEKAGDV
KGEEKAAEVDADAAETSSTGAAEAEAGDGDRNGDEPPSKKAKTANGASAK
KPTPARQPRMSGDPKGKEIFIDNLPATATEEAVKELAADVGGEVISVRVM
MSKDEEPKCTGLALVRFKEREFAAKALKSIPDQELDGNKLEARPSSNVNT
LFIGSLSKNWTKEMVLKEFEEKLEGVVNFEVAPDNIGHNVNRGFGFCTFK
DQEACKAAHSKHESIKLEILDTPVVLHWAESKGGREEDESGVYLSNVVED
VTSDFIRKELGRFGEIKEVVLGADNPNNKRKDFVIIKFIKPDSAAACIES
INGTDMKGRKVTAVKAQAKRRRESGGPRGGGPGGRSHGGGRSGGGMGGGS
RSRGQGGYGGGGGGGRRGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR036361SAP_dom_sf
IPR012677Nucleotide-bd_a/b_plait_sf
IPR003954RRM_dom_euk
IPR000504RRM_dom
IPR003034SAP_dom