mRNA_S-firma_F_contig10450.640.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10450.640.1 vs. uniprot
Match: D8LQB7_ECTSI (Similar to Phosphoacetylglucosamine mutase (PAGM) (Acetylglucosamine phosphomutase) (N-acetylglucosa) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB7_ECTSI) HSP 1 Score: 290 bits (741), Expect = 6.420e-93 Identity = 141/164 (85.98%), Postives = 152/164 (92.68%), Query Frame = 1
Query: 10 FVSVLPLSKDTRPHSPKLAALALLGIKLVGGVGKDQGVLTTPMLHHCVRMANGEAGSGPFWGKPEWCGEEGYYKMLASSFANLLASAEDPKKRRGSWFRRAAAGQVDPGGVFIDAAHGVGAPKMEALAKVLAEEMPGGLLEIEVRNRVGEGQLNEGCGAEWAQK 501
F ++ ++KDTRPHSPKLAALALLGI LVGG G DQGV+TTPMLHHCVRMANGEAGSGPFWGK EW GEEGYYKMLASSFA+LLASAEDPKKR GSWF+RAAA Q +PGGVF+DAAHGVGAPK+EALAKVLAEEMPGG LE+EVRNRVGEGQLNEGCGAEWAQK
Sbjct: 223 FTPIVYVAKDTRPHSPKLAALALLGISLVGGEGLDQGVMTTPMLHHCVRMANGEAGSGPFWGKEEWRGEEGYYKMLASSFADLLASAEDPKKRGGSWFQRAAARQPNPGGVFVDAAHGVGAPKLEALAKVLAEEMPGGRLEVEVRNRVGEGQLNEGCGAEWAQK 386
BLAST of mRNA_S-firma_F_contig10450.640.1 vs. uniprot
Match: A0A6H5JSA8_9PHAE (Phosphoacetylglucosamine mutase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSA8_9PHAE) HSP 1 Score: 285 bits (730), Expect = 5.330e-91 Identity = 140/164 (85.37%), Postives = 150/164 (91.46%), Query Frame = 1
Query: 10 FVSVLPLSKDTRPHSPKLAALALLGIKLVGGVGKDQGVLTTPMLHHCVRMANGEAGSGPFWGKPEWCGEEGYYKMLASSFANLLASAEDPKKRRGSWFRRAAAGQVDPGGVFIDAAHGVGAPKMEALAKVLAEEMPGGLLEIEVRNRVGEGQLNEGCGAEWAQK 501
F V+ ++KDTRPHSPKLAALALLGI LVGG G DQGV+TTPMLHHCVRMANGEAGSGPFWGK EW GEEGYYKMLASSFA+LLASAEDPKKR GSWF+RAAA Q +PG VF+DAAHGVGAPK+EALAKVLAEEMPGG LE+EVRNRVG GQLNEGCGAEWAQK
Sbjct: 150 FTPVVYVAKDTRPHSPKLAALALLGISLVGGEGLDQGVMTTPMLHHCVRMANGEAGSGPFWGKEEWRGEEGYYKMLASSFADLLASAEDPKKRGGSWFQRAAARQPNPGAVFVDAAHGVGAPKLEALAKVLAEEMPGGRLEVEVRNRVGAGQLNEGCGAEWAQK 313
BLAST of mRNA_S-firma_F_contig10450.640.1 vs. uniprot
Match: A0A7S0LV10_9EUKA (Phosphoacetylglucosamine mutase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LV10_9EUKA) HSP 1 Score: 134 bits (336), Expect = 1.330e-33 Identity = 76/164 (46.34%), Postives = 96/164 (58.54%), Query Frame = 1
Query: 13 VSVLPLSKDTRPHSPKLAALALLGIKLVGGVGKDQGVLTTPMLHHCVRMANGEAGSGPFWGKPE-WCGEEGYYKMLASSFANLLASAEDPKKRRGSWFRRAAAGQVDPGGVFIDAAHGVGAPKMEALAKVLAEEMPGGLLEIEVRNRVGEGQLNEGCGAEWAQK 501
V + L +DTRPHS KL+A+AL G+ +G G+D G+L+TP LHH VRM NGE G+GP+ G W E+GYY MLA +F+ LL+S D W DAAHGVGAPK+EAL + L++ V N VG G LN+GCGAE QK
Sbjct: 127 VGTVLLGRDTRPHSEKLSAIALEGVGALGAAGRDLGLLSTPQLHHLVRMTNGEKGAGPYVGDTAAWNSEQGYYTMLADAFSALLSSGGDRASCSPLW---------------ADAAHGVGAPKLEALLSKTPQ------LQVAVANTVGTGPLNDGCGAEHVQK 269
BLAST of mRNA_S-firma_F_contig10450.640.1 vs. uniprot
Match: A0A0M0J7R5_9EUKA (Phosphoacetylglucosamine mutase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7R5_9EUKA) HSP 1 Score: 126 bits (317), Expect = 1.310e-30 Identity = 68/158 (43.04%), Postives = 95/158 (60.13%), Query Frame = 1
Query: 28 LSKDTRPHSPKLAALALLGIKLVGGVGKDQGVLTTPMLHHCVRMANGEAGSGPFWGKPEWCGEEGYYKMLASSFANLLASAEDPKKRRGSWFRRAAAGQVDPGGVFIDAAHGVGAPKMEALAKVLAEEMPGGLLEIEVRNRVGEGQLNEGCGAEWAQK 501
+++DTR HS +LA LAL G+ G+G D G+LTTP LHH VR NG A +GP G W E GYY+MLAS++A ++S + ++ G +++D A GVGAP++ AL + + E LL + + N VG+G LNEGCGAE+ QK
Sbjct: 175 IARDTRSHSARLARLALEGVAHAAGIGTDCGILTTPQLHHIVRHVNGSAAAGPHVGPAAWASEAGYYEMLASAYAAFVSSVDATRR----------------GPLWVDTACGVGAPQLAALQRRMGSE----LLPLTLVNGVGDGALNEGCGAEYVQK 312
BLAST of mRNA_S-firma_F_contig10450.640.1 vs. uniprot
Match: A0A7S2SUY6_9STRA (Phosphoacetylglucosamine mutase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUY6_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.080e-28 Identity = 77/163 (47.24%), Postives = 97/163 (59.51%), Query Frame = 1
Query: 37 DTRPHSPKLAALALLGIKLVGGVGKDQGVLTTPMLHHCVRMAN-------GEA-GSGPFWGKPEWCGEEGYYKMLASSFANLLASAEDPKKRRGSWFRRAAAGQVDPGGVFIDAAHGVGAPKMEALAKVLAEEMPGGLLEIEVRNRVGEGQLNEGCGAEWAQK 501
D+RPHS +LAALA G L G + G+LTTP LHH VRM N GEA G P G +W GEEGYY+MLA++FA L+++AE AA V P + IDA+ GVGAPK+ + E+ G L++ V N +GEG LNEGCGAE+ QK
Sbjct: 138 DSRPHSERLAALARRGAALAGAAVSNLGLLTTPQLHHTVRMKNVQDGVSLGEATGLTPAHGA-DWAGEEGYYRMLATAFAALVSTAE-------------AAEGVRP--LCIDASCGVGAPKVTQAIAAVNAELDGAGLQVTVTNGIGEGALNEGCGAEFVQK 284
BLAST of mRNA_S-firma_F_contig10450.640.1 vs. uniprot
Match: A0A7S2FR16_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FR16_9EUKA) HSP 1 Score: 116 bits (291), Expect = 2.610e-28 Identity = 70/157 (44.59%), Postives = 91/157 (57.96%), Query Frame = 1
Query: 31 SKDTRPHSPKLAALALLGIKLVGGVGKDQGVLTTPMLHHCVRMANGEAGSGPFWGKPEWCGEEGYYKMLASSFANLLASAEDPKKRRGSWFRRAAAGQVDPGGVFIDAAHGVGAPKMEALAKVLAEEMPGGLLEIEVRNRVGEGQLNEGCGAEWAQK 501
++DTR HS +LA LAL GI VGG +D +LTTP LHH VR ANG A +G G +W E GY +MLA +F + +AE R G +++DAA GVGAP++ L + L G LL + + N VG+G LNEGCGAE+ QK
Sbjct: 127 ARDTRSHSERLALLALDGIASVGGSSEDFKLLTTPQLHHIVRHANGTAAAGRHVGPAKWASEAGYCEMLADAFGRFV-TAEVASSR---------------GALWVDAACGVGAPQLATLQRHL-----GSLLPLTIANAVGDGALNEGCGAEYVQK 262
BLAST of mRNA_S-firma_F_contig10450.640.1 vs. uniprot
Match: W4G4H9_9STRA (Phosphoacetylglucosamine mutase n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4H9_9STRA) HSP 1 Score: 105 bits (261), Expect = 3.480e-23 Identity = 70/158 (44.30%), Postives = 85/158 (53.80%), Query Frame = 1
Query: 28 LSKDTRPHSPKLAALALLGIKLVGGVGKDQGVLTTPMLHHCVRMANGEAGSGPFWGKPEWCGEEGYYKMLASSFANLLASAEDPKKRRGSWFRRAAAGQVDPGGVFIDAAHGVGAPKMEALAKVLAEEMPGGLLEIEVRNRVGEGQLNEGCGAEWAQK 501
++KDTR S L+ LA G LVGG D G+ TTP LHH VRM N E + K +W E GYY ML +F L S DPKK P +++D AHGVGAP++ LAK L G LL +E+RN +GQLN CGAE QK
Sbjct: 166 IAKDTRVSSEHLSELAREGALLVGGNVLDFGLQTTPQLHHYVRMWNFEQ-----YNKGDWASETGYYNMLVDAFKQLT-SGVDPKKLE----------LRTP--LYVDCAHGVGAPQLSKLAKEL-----GDLLHVEIRNTPADGQLNHECGAEHVQK 300
BLAST of mRNA_S-firma_F_contig10450.640.1 vs. uniprot
Match: A0A7S2CLD8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CLD8_9STRA) HSP 1 Score: 101 bits (251), Expect = 7.760e-22 Identity = 71/186 (38.17%), Postives = 95/186 (51.08%), Query Frame = 1
Query: 31 SKDTRPHSPKLAALALLGIKLVGGVGKDQGVLTTPMLHHCVRMAN-GEAGSG----PFWGKPE----WCGEEGYYKMLASSFANLLASA-------------------EDPKKRRGSWFRRAAAGQVDPGGVFIDAAHGVGAPKMEALAKVLAEEMPGG-LLEIEVRNRVGEGQLNEGCGAEWAQK 501
++DTR HSP LA+LA+ G L G D G+LTTP+LHH VRM N + G F P+ W E GY M+ S++ L+ +A ED R + G D G + +D A GVGA KM + + + + GG LL +EVRN VG+G+LNE CGAE+ QK
Sbjct: 87 ARDTRSHSPHLASLAIRGASLFGAASTDFGILTTPVLHHIVRMRNIADPPDGREIIDFGVSPDNARSWASELGYGAMVGSAYRWLVGTAGGAEERLKCLQGDGTMEFNEDVLNERQFATFMESGGGGDRGTLHLDGASGVGALKMPGVVAAVNDGVVGGTLLRLEVRNGVGDGELNESCGAEFVQK 272
BLAST of mRNA_S-firma_F_contig10450.640.1 vs. uniprot
Match: A0A024TDR4_9STRA (Phosphoacetylglucosamine mutase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TDR4_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.000e-21 Identity = 62/158 (39.24%), Postives = 83/158 (52.53%), Query Frame = 1
Query: 28 LSKDTRPHSPKLAALALLGIKLVGGVGKDQGVLTTPMLHHCVRMANGEAGSGPFWGKPEWCGEEGYYKMLASSFANLLASAEDPKKRRGSWFRRAAAGQVDPGGVFIDAAHGVGAPKMEALAKVLAEEMPGGLLEIEVRNRVGEGQLNEGCGAEWAQK 501
++KDTR S L+ LA G L+GG D G+ TTP LHH VRM N E + K +W E GYY ML +F L + + K + +++D AHGVGAP++ LAK L G +L +E+RN +G+LN CGAE QK
Sbjct: 162 IAKDTRLSSEHLSELAREGALLIGGNVLDFGLQTTPQLHHYVRMWNFEQ-----YNKGDWASETGYYNMLVDAFKQLTSGVDSKKLELRT-------------PLYVDCAHGVGAPQLSKLAKEL-----GDVLHVEIRNAPADGELNHECGAEHVQK 296
BLAST of mRNA_S-firma_F_contig10450.640.1 vs. uniprot
Match: A0A7S4ETJ7_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ETJ7_CHRCT) HSP 1 Score: 91.7 bits (226), Expect = 7.970e-20 Identity = 40/71 (56.34%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 28 LSKDTRPHSPKLAALALLGIKLVGGVGKDQGVLTTPMLHHCVRMANGEAGSGPFWGKPEWCGEEGYYKMLA 240
+ +DTR HS LAA+A G + +GGV +D G+LTTP LHH VRM NGE G+GP +GK W E GYY ML+
Sbjct: 145 IGRDTRAHSAGLAAIAAQGARAIGGVAEDAGLLTTPQLHHLVRMGNGEKGAGPLYGKEAWASEGGYYAMLS 215 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10450.640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10450.640.1 >prot_S-firma_F_contig10450.640.1 ID=prot_S-firma_F_contig10450.640.1|Name=mRNA_S-firma_F_contig10450.640.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=167bp MVCFVSVLPLSKDTRPHSPKLAALALLGIKLVGGVGKDQGVLTTPMLHHCback to top mRNA from alignment at S-firma_F_contig10450:2064..4939- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10450.640.1 ID=mRNA_S-firma_F_contig10450.640.1|Name=mRNA_S-firma_F_contig10450.640.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2876bp|location=Sequence derived from alignment at S-firma_F_contig10450:2064..4939- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10450:2064..4939- >mRNA_S-firma_F_contig10450.640.1 ID=mRNA_S-firma_F_contig10450.640.1|Name=mRNA_S-firma_F_contig10450.640.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1002bp|location=Sequence derived from alignment at S-firma_F_contig10450:2064..4939- (Sphaerotrichia firma ET2_F female)back to top |