mRNA_S-firma_F_contig10442.627.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10442.627.1 vs. uniprot
Match: A0A7S1CCX3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCX3_9STRA) HSP 1 Score: 105 bits (263), Expect = 3.190e-27 Identity = 50/68 (73.53%), Postives = 57/68 (83.82%), Query Frame = 1
Query: 1 PFKASTFEVVPTVGFSVEHFTKGKLKFEAFDMSGVGRYRSLWEQYYRDAHAIIFVVDSTDKIRMCVAK 204
P K+S++EVVPTVGFSVE F+K L F AFDMSG GRYRSLWE YY D AII+V+DSTDK+RMCVAK
Sbjct: 39 PKKSSSYEVVPTVGFSVESFSKNGLAFTAFDMSGQGRYRSLWETYYADVQAIIYVLDSTDKVRMCVAK 106
BLAST of mRNA_S-firma_F_contig10442.627.1 vs. uniprot
Match: A0A7S0WXA2_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WXA2_9CHLO) HSP 1 Score: 103 bits (257), Expect = 8.700e-27 Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 1
Query: 7 KASTFEVVPTVGFSVEHFTKGKLKFEAFDMSGVGRYRSLWEQYYRDAHAIIFVVDSTDKIRMCVAK 204
K + EV PTVGFSVE+F KG L F FDMSG GRYR+LWEQYY+DAHAII+V+D++DK+R+CVAK
Sbjct: 6 KGAPAEVTPTVGFSVENFQKGPLYFTVFDMSGAGRYRNLWEQYYKDAHAIIYVIDTSDKLRLCVAK 71
BLAST of mRNA_S-firma_F_contig10442.627.1 vs. uniprot
Match: A0A6S9ITP1_HETAK (ADP-ribosylation factor-like protein 6 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ITP1_HETAK) HSP 1 Score: 103 bits (258), Expect = 2.380e-26 Identity = 48/68 (70.59%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 1 PFKASTFEVVPTVGFSVEHFTKGKLKFEAFDMSGVGRYRSLWEQYYRDAHAIIFVVDSTDKIRMCVAK 204
P KA+TFE PTVGF VE F+K L F FDMSG RYRSLWE YYRD A+IFV+DSTD+IRMCVAK
Sbjct: 52 PKKATTFEATPTVGFQVEEFSKNSLNFTIFDMSGQARYRSLWEHYYRDVEAVIFVLDSTDRIRMCVAK 119
BLAST of mRNA_S-firma_F_contig10442.627.1 vs. uniprot
Match: A0A7S0RWP1_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RWP1_9CHLO) HSP 1 Score: 103 bits (257), Expect = 2.440e-26 Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 1
Query: 7 KASTFEVVPTVGFSVEHFTKGKLKFEAFDMSGVGRYRSLWEQYYRDAHAIIFVVDSTDKIRMCVAK 204
K + EV PTVGFSVE+F KG L F FDMSG GRYR+LWEQYY+DAHAII+V+D++DK+R+CVAK
Sbjct: 45 KGAPAEVTPTVGFSVENFQKGPLYFTVFDMSGAGRYRNLWEQYYKDAHAIIYVIDTSDKLRLCVAK 110
BLAST of mRNA_S-firma_F_contig10442.627.1 vs. uniprot
Match: A0A7S2V202_9STRA (ADP-ribosylation factor-like protein 6 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V202_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.570e-26 Identity = 48/68 (70.59%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 1 PFKASTFEVVPTVGFSVEHFTKGKLKFEAFDMSGVGRYRSLWEQYYRDAHAIIFVVDSTDKIRMCVAK 204
P KA+TFEV PTVGF VE F+K L F FDMSG RYRSLWE YYRD AI+FV+DSTD+IR+CVAK
Sbjct: 39 PKKATTFEVTPTVGFQVEEFSKNNLNFTIFDMSGQARYRSLWEHYYRDVQAIMFVLDSTDRIRLCVAK 106
BLAST of mRNA_S-firma_F_contig10442.627.1 vs. uniprot
Match: A0A7S3H1V6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1V6_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.030e-25 Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 1 PFKASTFEVVPTVGFSVEHFTKGKLKFEAFDMSGVGRYRSLWEQYYRDAHAIIFVVDSTDKIRMCVAK 204
P KA+TFEV PTVGF VE F+K + F +DMSG GRYR+LWE YY D AIIFV+DSTD++RMCVAK
Sbjct: 38 PKKAATFEVTPTVGFQVEEFSKNNVNFTVYDMSGQGRYRNLWEHYYSDVEAIIFVLDSTDRLRMCVAK 105
BLAST of mRNA_S-firma_F_contig10442.627.1 vs. uniprot
Match: A0A6T7CD24_9EUKA (ADP-ribosylation factor-like protein 6 n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A6T7CD24_9EUKA) HSP 1 Score: 101 bits (251), Expect = 3.260e-25 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 1 PFKASTFEVVPTVGFSVEHFTKGKLKFEAFDMSGVGRYRSLWEQYYRDAHAIIFVVDSTDKIRMCVAK 204
P KA++ EVVPTVGF+VE+FTK L F FDMSG GRYR+LWE YY++ IIF +DSTDKIRMCVAK
Sbjct: 59 PRKAASAEVVPTVGFAVENFTKNNLTFTVFDMSGQGRYRNLWEHYYKEVAGIIFCIDSTDKIRMCVAK 126
BLAST of mRNA_S-firma_F_contig10442.627.1 vs. uniprot
Match: A0A8J5X8L9_DIALT (ADP-ribosylation factor-like protein 6 n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X8L9_DIALT) HSP 1 Score: 100 bits (248), Expect = 5.550e-25 Identity = 47/68 (69.12%), Postives = 52/68 (76.47%), Query Frame = 1
Query: 1 PFKASTFEVVPTVGFSVEHFTKGKLKFEAFDMSGVGRYRSLWEQYYRDAHAIIFVVDSTDKIRMCVAK 204
P K + E+VPTVGF+VE F K L F FDMSG GRYRSLWE YY+D I+FVVDSTDKIRMCVAK
Sbjct: 39 PKKTAATELVPTVGFAVEEFAKNNLNFTVFDMSGQGRYRSLWEHYYKDVTGIMFVVDSTDKIRMCVAK 106
BLAST of mRNA_S-firma_F_contig10442.627.1 vs. uniprot
Match: A0A1Y1HJS7_KLENI (ADP-ribosylation factor family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HJS7_KLENI) HSP 1 Score: 99.8 bits (247), Expect = 7.860e-25 Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 1 PFKASTFEVVPTVGFSVEHFTKGKLKFEAFDMSGVGRYRSLWEQYYRDAHAIIFVVDSTDKIRMCVAK 204
P KA T +VVPT+GF VE F K ++F AFDMSG GRYRSLWE Y++DA A+IFV+D+TD +RMCVAK
Sbjct: 39 PKKARTADVVPTIGFQVESFLKHGIQFTAFDMSGAGRYRSLWEAYFKDAQAVIFVIDATDLVRMCVAK 106
BLAST of mRNA_S-firma_F_contig10442.627.1 vs. uniprot
Match: A0A7S0HPL8_9EUKA (ADP-ribosylation factor-like protein 6 (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HPL8_9EUKA) HSP 1 Score: 99.4 bits (246), Expect = 1.030e-24 Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 1 PFKASTFEVVPTVGFSVEHFTKGKLKFEAFDMSGVGRYRSLWEQYYRDAHAIIFVVDSTDKIRMCVAK 204
P K+++ EVVPTVGFSVE F KG L F FDMSG GRYR+LWE YY+D IIF +DS DKIRMCVA+
Sbjct: 39 PKKSTSTEVVPTVGFSVEEFAKGNLGFTVFDMSGQGRYRNLWEHYYKDCGGIIFTIDSCDKIRMCVAR 106 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10442.627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10442.627.1 >prot_S-firma_F_contig10442.627.1 ID=prot_S-firma_F_contig10442.627.1|Name=mRNA_S-firma_F_contig10442.627.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=68bp PFKASTFEVVPTVGFSVEHFTKGKLKFEAFDMSGVGRYRSLWEQYYRDAHback to top mRNA from alignment at S-firma_F_contig10442:80..283+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10442.627.1 ID=mRNA_S-firma_F_contig10442.627.1|Name=mRNA_S-firma_F_contig10442.627.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=204bp|location=Sequence derived from alignment at S-firma_F_contig10442:80..283+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10442:80..283+ >mRNA_S-firma_F_contig10442.627.1 ID=mRNA_S-firma_F_contig10442.627.1|Name=mRNA_S-firma_F_contig10442.627.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=408bp|location=Sequence derived from alignment at S-firma_F_contig10442:80..283+ (Sphaerotrichia firma ET2_F female)back to top |