prot_S-firma_F_contig1037.528.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1037.528.1
Unique Nameprot_S-firma_F_contig1037.528.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length327
Homology
BLAST of mRNA_S-firma_F_contig1037.528.1 vs. uniprot
Match: D8LRG1_ECTSI (HNH endonuclease family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG1_ECTSI)

HSP 1 Score: 458 bits (1178), Expect = 1.070e-159
Identity = 239/333 (71.77%), Postives = 263/333 (78.98%), Query Frame = 0
Query:    1 MAHRKRMRT------TWLLGACVVNSL-QGGAAFALPPQQDLLRHSSRHCQVDASSFGIGRAGRAWCGASGPAAVARRGDISMSAKQKRGRKTAGVRSRRGGPRTDVEGYSHDNFIKLRKEVSGQVETSKQGNRRSKKINFSGGIDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSHPPFTRRNLFLRDSHQCQYCMKYFPPHNLSFDHVVPKKLGGKGTWDNVVTACGRCNNRKSDCHPRDLRSIGMSLNKYPHTPTFSQLQNLARRYPPNEIHETWEDYLYFESEILEED 326
            MAHRKR R       TW LGACV+N+  QG +AFA           S   Q D +S G   A +A        A A R +  +S K K+  K   VRSRR GP  +VEGYSH  F+K++ EV+ QV T+K+G+RR++ +NF+GGIDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRS+RSPSVVVQLPSVIALKEFVNNHR+HPPFTRRNLFLRDSHQCQYC KYF PHNLSFDHVVPKKLGGKGTWDNVVTACGRCNNRKSDCHPRDL+SIGMSL KYP TPTFSQLQ  ARRYPP EIHETW DYLYFESEILEE+
Sbjct:    1 MAHRKRARNNGARAKTWFLGACVMNAAAQGASAFAFSSYS--ASSFSLRGQADPASRGTVLAKQA-------VAPAGRAENLLSMKIKKAGKKP-VRSRRSGPPANVEGYSHAAFVKMKNEVALQVATNKKGSRRTRTVNFNGGIDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSVRSPSVVVQLPSVIALKEFVNNHRTHPPFTRRNLFLRDSHQCQYCQKYFAPHNLSFDHVVPKKLGGKGTWDNVVTACGRCNNRKSDCHPRDLKSIGMSLAKYPVTPTFSQLQAKARRYPPLEIHETWGDYLYFESEILEEE 323          
BLAST of mRNA_S-firma_F_contig1037.528.1 vs. uniprot
Match: A0A836CK35_9STRA (HNH endonuclease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK35_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.810e-82
Identity = 121/185 (65.41%), Postives = 145/185 (78.38%), Query Frame = 0
Query:  138 IDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSHPPFTRRNLFLRDSHQCQYCMKYFPPHNLSFDHVVPKKLGGKGTWDNVVTACGRCNNRKSDCHPRDLRSIGMSLNKYPHTPTFSQLQNLARRYPPNEIHETWEDYLYFESEI 322
            ++SCP LVLNADYQPLSYLPLSLW WQ+ IKAV+ ++VVVLAT+ DR +RS +V ++LPSVIALK +VN H   P FTRRNL+LRD +QC YC K F   +LSFDHV P+KLGG  +W NVVT+C RCNN K DCHP+ L  IGM LNK PH PTF +LQN ARRYPP  IH+TW +YLY++S I
Sbjct:   78 LESCPALVLNADYQPLSYLPLSLWPWQEAIKAVWMDRVVVLATH-DRYVRSANVELKLPSVIALKGYVNQHAKVPSFTRRNLYLRDGYQCAYCSKQFQAGDLSFDHVTPRKLGGPTSWTNVVTSCHRCNNAKGDCHPKSLSRIGMRLNKAPHIPTFYELQNQARRYPPKLIHKTWAEYLYYDSAI 261          
BLAST of mRNA_S-firma_F_contig1037.528.1 vs. uniprot
Match: A0A7S2S5X4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5X4_9STRA)

HSP 1 Score: 228 bits (581), Expect = 2.290e-68
Identity = 106/200 (53.00%), Postives = 141/200 (70.50%), Query Frame = 0
Query:  117 GQVETSKQGNRRSKKINFSGGIDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSHPPFTRRNLFLRDSHQCQYCMKYFPPHNLSFDHVVPKKLGGKGTWDNVVTACGRCNNRKSDCHPRDLRSIGMSLNKYPHTPTFSQLQNLARRYPPNEIHETWEDYL 316
            G V T  +     K +N+   ++ CP LVLNAD+QPLSY+PLS+W WQD IKAVF+E+VVV+A Y +  +RS SV VQ+PSVIALK++V   R+ P FTRRN+FLRDS+ CQYC       +L+FDHV+P+  GG  +W+NVVTAC RCNN+K D  P+ L  +G+SL + P  P+  +LQ  AR++PP  +H TW DYL
Sbjct:  188 GSVSTILEECMVKKSVNYFNNLEQCPVLVLNADFQPLSYIPLSIWSWQDAIKAVFAERVVVVANY-EHEVRSASVAVQVPSVIALKQYVPQARATPTFTRRNVFLRDSYCCQYCGTCAQTQHLTFDHVLPRSKGGDTSWNNVVTACHRCNNKKKDMMPQQLHHLGLSLLREPRVPSHYELQAAARKFPPKVMHHTWRDYL 386          
BLAST of mRNA_S-firma_F_contig1037.528.1 vs. uniprot
Match: A0A2E4F2L9_9PROT (HNH endonuclease n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4F2L9_9PROT)

HSP 1 Score: 217 bits (553), Expect = 4.620e-67
Identity = 101/185 (54.59%), Postives = 135/185 (72.97%), Query Frame = 0
Query:  138 IDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSHPPFTRRNLFLRDSHQCQYCMKYFPPHNLSFDHVVPKKLGGKGTWDNVVTACGRCNNRKSDCHPRDLRSIGMSLNKYPHTPTFSQLQNLARRYPPNEIHETWEDYLYFESEI 322
            +D+CP LVLNADY+PLSY PLSLW WQ+ +KAVF ++V ++A Y ++ +RSPS  ++LPSVI+LK +V ++R  P FTR N+FLRD   CQYC KYF  H+L+FDHV+PK  GG   W NV+TAC  CN RK +   R +  +GM L   P  PT  +LQN+ RRYPPN +HE+W D+LY++SE+
Sbjct:    3 VDTCPALVLNADYRPLSYFPLSLWSWQETVKAVFLDRVHIVAEY-EQEVRSPSWQMRLPSVISLKRYVQSNR-RPAFTRFNVFLRDGFTCQYCRKYFDTHDLTFDHVLPKSRGGFTNWTNVITACASCNLRKGN---RLMAEVGMHLVYMPRVPTVYELQNVGRRYPPNYLHESWSDFLYWDSEL 182          
BLAST of mRNA_S-firma_F_contig1037.528.1 vs. uniprot
Match: A0A7W6WA90_9PROT (5-methylcytosine-specific restriction endonuclease McrA n=2 Tax=Roseospira visakhapatnamensis TaxID=390880 RepID=A0A7W6WA90_9PROT)

HSP 1 Score: 213 bits (542), Expect = 2.250e-65
Identity = 105/189 (55.56%), Postives = 133/189 (70.37%), Query Frame = 0
Query:  134 FSGGIDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSHPPFTRRNLFLRDSHQCQYCMKYFPPHNLSFDHVVPKKLGGKGTWDNVVTACGRCNNRKSDCHPRDLRSIGMSLNKYPHTPTFSQLQNLARRYPPNEIHETWEDYLYFESEI 322
              GG    P LVLNADY+PLSY PLSLW WQD +K+VF ++V V+  Y D  IRSPS+ V+LPSVI+LKEFV+  R  P FTR N+FLRD   CQYC + FP H L+FDHVVP+  GG+ TW+NVVTAC  CN RKS+  P+   +  M L + P  PT   LQ++ R +PPN +HE+W DYLY++SE+
Sbjct:    1 MEGGPPHAPALVLNADYRPLSYFPLSLWPWQDAVKSVFLDRVHVVCEY-DTVIRSPSLEVRLPSVISLKEFVSTARM-PAFTRFNVFLRDRFTCQYCGRRFPTHELTFDHVVPRSWGGRTTWENVVTACAACNLRKSNRTPK---TASMPLMREPRVPTHHALQDVGRAFPPNFLHESWRDYLYWDSEL 184          
BLAST of mRNA_S-firma_F_contig1037.528.1 vs. uniprot
Match: UPI001B298D4B (HNH endonuclease n=1 Tax=Rhodospirillales bacterium TMPK1 TaxID=2812848 RepID=UPI001B298D4B)

HSP 1 Score: 213 bits (542), Expect = 3.330e-65
Identity = 102/191 (53.40%), Postives = 135/191 (70.68%), Query Frame = 0
Query:  132 INFSGGIDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSHPPFTRRNLFLRDSHQCQYCMKYFPPHNLSFDHVVPKKLGGKGTWDNVVTACGRCNNRKSDCHPRDLRSIGMSLNKYPHTPTFSQLQNLARRYPPNEIHETWEDYLYFESEI 322
            +  S  +DSCP LVLNAD++PLSY PLSLW WQD +KAVF ++V +L+ Y D+++RSP+  ++LPSVI+LKE+V   R  P FTR N+FLRDS  CQYC   FP H L+FDHV+P+  GG+ TWDNV+TAC  CN RK D   +  R  GM     P  P+  +LQ   R++PPN +HE+W DYLY++SE+
Sbjct:   12 LRLSPPLDSCPALVLNADFRPLSYFPLSLWSWQDTVKAVFLDRVNILSHY-DQTVRSPNFEMRLPSVISLKEYVQATR-RPAFTRFNVFLRDSFTCQYCGTGFPTHELTFDHVIPRSRGGRTTWDNVLTACSACNLRKGD---KLCRECGMHPRLEPFQPSAFELQENGRQFPPNFLHESWRDYLYWDSEL 197          
BLAST of mRNA_S-firma_F_contig1037.528.1 vs. uniprot
Match: A0A2E3IPI6_9PROT (HNH endonuclease n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E3IPI6_9PROT)

HSP 1 Score: 212 bits (540), Expect = 4.660e-65
Identity = 108/192 (56.25%), Postives = 141/192 (73.44%), Query Frame = 0
Query:  135 SGGIDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSHPPFTRRNLFLRDSHQCQYCMKYFPPHNLSFDHVVPKKLGGKGTWDNVVTACGRCNNRKSDCHPRDLRSIGMSLNKYPHTPTFSQLQNLARRYPPNEIHETWEDYLYFESEILEED 326
            +G +++ P LVLNAD++PLSYLPLSLWGWQD +KA F  +V V+A Y ++ IRSPS  +QLPSVIALK++V  +R+ P FTR N+FLRD   CQYC   FP  +L+FDHV+P+  GG  +W+NVVTAC +CN RK +   R LR  GM L K P  PT  QLQ++ R +PPN +HE+WEDYLY++S +LE D
Sbjct:    3 TGSLENYPALVLNADFRPLSYLPLSLWGWQDSVKACFQGRVNVVAEY-EQVIRSPSFEMQLPSVIALKDYVPMNRA-PAFTRFNVFLRDHFNCQYCSTRFPVQSLTFDHVIPRSKGGGTSWENVVTACQKCNLRKGN---RYLRDSGMRLIKEPLRPTAYQLQDVGRSFPPNFLHESWEDYLYWDS-VLERD 188          
BLAST of mRNA_S-firma_F_contig1037.528.1 vs. uniprot
Match: A0A6I7P8K3_9PROT (HNH endonuclease n=1 Tax=Geminicoccaceae bacterium TaxID=2448052 RepID=A0A6I7P8K3_9PROT)

HSP 1 Score: 211 bits (536), Expect = 2.200e-64
Identity = 101/185 (54.59%), Postives = 132/185 (71.35%), Query Frame = 0
Query:  138 IDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSHPPFTRRNLFLRDSHQCQYCMKYFPPHNLSFDHVVPKKLGGKGTWDNVVTACGRCNNRKSDCHPRDLRSIGMSLNKYPHTPTFSQLQNLARRYPPNEIHETWEDYLYFESEI 322
            +D+CP LVLNADYQPLSY PLSLWGWQD +KA+F ++V V++ Y DR IRSPS  ++LPSV+ALKE+V     +PPFTR NLFLRD   CQYC   F   +L+FDHVVP+  GG+ +WDN+VTAC RCN +K +  P +    GM     P  PT  +LQ   R +PPN +HE+W D+LY+++E+
Sbjct:   12 LDACPALVLNADYQPLSYFPLSLWGWQDAVKAMFLDRVAVVSYY-DREIRSPSFRLRLPSVVALKEYVQQSH-YPPFTRFNLFLRDRFGCQYCGTRFRAEDLTFDHVVPRSRGGQTSWDNIVTACTRCNLQKGNKLPAEC---GMPPRTKPRRPTNYELQRAGRAFPPNYLHESWRDFLYWDTEL 191          
BLAST of mRNA_S-firma_F_contig1037.528.1 vs. uniprot
Match: A0A1G7CT82_9PROT (5-methylcytosine-specific restriction endonuclease McrA n=2 Tax=Rhodospirillaceae TaxID=41295 RepID=A0A1G7CT82_9PROT)

HSP 1 Score: 210 bits (535), Expect = 2.560e-64
Identity = 104/183 (56.83%), Postives = 132/183 (72.13%), Query Frame = 0
Query:  140 SCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSHPPFTRRNLFLRDSHQCQYCMKYFPPHNLSFDHVVPKKLGGKGTWDNVVTACGRCNNRKSDCHPRDLRSIGMSLNKYPHTPTFSQLQNLARRYPPNEIHETWEDYLYFESEI 322
            S P LVLNADY+PLSY PLSL  WQD +KAVF ++V V+  Y DR I SPS+ ++LPSVI+LK+FV   R+ P FTR N+FLRD   CQYC + FP H+L+FDHVVP+  GG+ TW NVVTACG CN RKS+  PR   +  M L + PH P+   LQ + R +PPN +HE+W DYLY++SE+
Sbjct:    7 SSPALVLNADYRPLSYFPLSLVPWQDAVKAVFLDRVNVVCEY-DRVIHSPSLEIRLPSVISLKQFVRTART-PAFTRFNVFLRDRFTCQYCGQRFPTHDLTFDHVVPRSWGGRTTWANVVTACGACNLRKSNRTPR---AASMPLRQPPHVPSHHMLQEIGRAFPPNYLHESWRDYLYWDSEL 184          
BLAST of mRNA_S-firma_F_contig1037.528.1 vs. uniprot
Match: A0A1G8D236_9PROT (5-methylcytosine-specific restriction endonuclease McrA n=1 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G8D236_9PROT)

HSP 1 Score: 210 bits (535), Expect = 2.560e-64
Identity = 104/185 (56.22%), Postives = 129/185 (69.73%), Query Frame = 0
Query:  138 IDSCPCLVLNADYQPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIALKEFVNNHRSHPPFTRRNLFLRDSHQCQYCMKYFPPHNLSFDHVVPKKLGGKGTWDNVVTACGRCNNRKSDCHPRDLRSIGMSLNKYPHTPTFSQLQNLARRYPPNEIHETWEDYLYFESEI 322
            +++CP LVLNAD++PLSY PLSLW WQD IKAVF E+V V++ Y +R IRSP   V+LPSVI+LKEF    R  P FTR N+FLRD   CQYC + FP H L+FDHVVP+  GG+ TW NVVTACG CN +K    PR     GM L + P  PT   LQ   R +PPN +HE+W D+LY++SE+
Sbjct:    5 LENCPALVLNADFRPLSYFPLSLWSWQDTIKAVFLERVNVVSEY-EREIRSPRQAVRLPSVISLKEFAPVAR-RPAFTRFNVFLRDRFTCQYCGQRFPTHELTFDHVVPRSKGGRTTWHNVVTACGACNLKKGSRLPRQA---GMPLIREPMEPTSPMLQEFGRAFPPNYLHESWRDFLYWDSEL 184          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1037.528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRG1_ECTSI1.070e-15971.77HNH endonuclease family protein n=1 Tax=Ectocarpus... [more]
A0A836CK35_9STRA1.810e-8265.41HNH endonuclease family protein n=1 Tax=Tribonema ... [more]
A0A7S2S5X4_9STRA2.290e-6853.00Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A2E4F2L9_9PROT4.620e-6754.59HNH endonuclease n=1 Tax=Rhodospirillaceae bacteri... [more]
A0A7W6WA90_9PROT2.250e-6555.565-methylcytosine-specific restriction endonuclease... [more]
UPI001B298D4B3.330e-6553.40HNH endonuclease n=1 Tax=Rhodospirillales bacteriu... [more]
A0A2E3IPI6_9PROT4.660e-6556.25HNH endonuclease n=5 Tax=Alphaproteobacteria TaxID... [more]
A0A6I7P8K3_9PROT2.200e-6454.59HNH endonuclease n=1 Tax=Geminicoccaceae bacterium... [more]
A0A1G7CT82_9PROT2.560e-6456.835-methylcytosine-specific restriction endonuclease... [more]
A0A1G8D236_9PROT2.560e-6456.225-methylcytosine-specific restriction endonuclease... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003615HNH nucleaseSMARTSM00507HNH_5coord: 214..267
e-value: 2.0E-9
score: 47.3
NoneNo IPR availableGENE3D3.30.40.60coord: 200..298
e-value: 8.5E-20
score: 72.4
NoneNo IPR availablePANTHERPTHR33877:SF2coord: 113..319
NoneNo IPR availablePANTHERPTHR33877FAMILY NOT NAMEDcoord: 113..319
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..327
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..28
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.592
IPR029471HNH endonuclease 5PFAMPF14279HNH_5coord: 227..277
e-value: 5.3E-16
score: 58.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1037contigS-firma_F_contig1037:17028..23737 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1037.528.1mRNA_S-firma_F_contig1037.528.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1037 17028..23770 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1037.528.1 ID=prot_S-firma_F_contig1037.528.1|Name=mRNA_S-firma_F_contig1037.528.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=327bp
MAHRKRMRTTWLLGACVVNSLQGGAAFALPPQQDLLRHSSRHCQVDASSF
GIGRAGRAWCGASGPAAVARRGDISMSAKQKRGRKTAGVRSRRGGPRTDV
EGYSHDNFIKLRKEVSGQVETSKQGNRRSKKINFSGGIDSCPCLVLNADY
QPLSYLPLSLWGWQDVIKAVFSEKVVVLATYGDRSIRSPSVVVQLPSVIA
LKEFVNNHRSHPPFTRRNLFLRDSHQCQYCMKYFPPHNLSFDHVVPKKLG
GKGTWDNVVTACGRCNNRKSDCHPRDLRSIGMSLNKYPHTPTFSQLQNLA
RRYPPNEIHETWEDYLYFESEILEEDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029471HNH_5
IPR003615HNH_nuc