prot_S-firma_F_contig1037.527.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1037.527.1
Unique Nameprot_S-firma_F_contig1037.527.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length627
Homology
BLAST of mRNA_S-firma_F_contig1037.527.1 vs. uniprot
Match: D8LRG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG2_ECTSI)

HSP 1 Score: 401 bits (1031), Expect = 3.470e-124
Identity = 346/681 (50.81%), Postives = 403/681 (59.18%), Query Frame = 0
Query:    1 MDDHLMDEVFARFDPEGSGKVPVHRLVQHLLPSAERASHHLVPKTDEQGQATKTLLGKIFGMTGKRREMISLNGSGVEDPQGQSLLERMAAGDKGDGEKIRTQLAQRAKAAAAAATAVEIAAVEAARNG-VKVTPATLAAAAARRRDNSPLAFSGDVNANVPP----GTSLSRASDPRPETTSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGWRQSCR-ETSLEEREKRLIEREAELRRREDAVAVADVTGDASAPAAMVP----------------AKPRPPRRERDRPASATPLRQHGGNDRQQEKL-------RPGSSNRSSXXXXXXXXXXXXXXXXPRSARRSRNSVEASRARKEEAALVARCRALGAVRRKAATEAAARRREESREKTPSRPPETEANETSGTAGHAAPGRSPASESRHRSDGSSPTSAVARPGEHGA-----------------AXXXXXXXXXXXXXXXXXXRPQSAAATRRPGGCPHXXXXXXXXXXXXXXXXRGGDGARAGHWGGATREGGTGPNKVR-KEASPRSE-SVDGQERLGTGAPARGSSRRPASAGVPVGDRGERYRKRLDSAYAMQMRSMQRLEKRRAQSSHRRSPERPASGGCEGVSTGQFKSRYSGLDRFVLANRV-------AAMPTGASRFGGGVPFYG 626
            MDDHL+DE+FARFDPE +GK+ VHRLVQ+LLPS +  SHHLVPKTDEQGQATKTLLGK+FGMTGKRREMISLNGSGV+DPQG+SLLERMAAGD+GDGEKI+ +LA++AKAAA AATA E+AAVEAAR+G   VTPA         RDNSPL F+GD+   VP     GT+   A+  RPET+ST+XXXXXXXXXXXXXXXXXX                 GG RQS   E SL EREK L  REA LRRREDA+  AD +   S PA++                  A+PRPP RER+RPASAT LR++ GN              RP S+                    P +A RSR +  AS  ++EEA  +ARCRAL A RRKAA   AA R+  +      RP E   N  +       PG +  ++ R  S        V + GE G                  A                  RPQSAA+ RR         XXXXXXXXXX    G    R   WGG   EGG    ++R K+  P+S+ S   +E    G P    S RPASA +  GDRG RYR RLDS YA+QMR+MQRL+KRRAQS+H+RSPERPASGGCEG+STGQFKSRYSGLDRFVLA          AA   GASRFG GVPFYG
Sbjct:  390 MDDHLLDEIFARFDPERTGKMAVHRLVQYLLPSKDDCSHHLVPKTDEQGQATKTLLGKVFGMTGKRREMISLNGSGVDDPQGESLLERMAAGDRGDGEKIKAELARKAKAAAVAATAREMAAVEAARSGGPAVTPAXXXXXXXXXRDNSPLVFNGDL---VPTPGATGTAAQHAAAARPETSSTNXXXXXXXXXXXXXXXXXXVGR--------------GGSRQSSTGEFSLREREKHLDAREAALRRREDAIMAADKSDQVS-PASVTTTNRAVDSGAANGGRAAARPRPPSRERERPASATALRRYMGNXXXXXXXXXXXXXXRPASA----AGRERGTMSGHNNDCRPTNANRSRGAPGASPRQREEADSIARCRALDAARRKAAATVAAGRQRSTPGDRQHRP-EDGVNRAAQAVPPRHPGTANDADKRPVSASLPSREGVRQAGETGTSTGRGDGNLTTGGPRAEASGKATGTEAAGGAERIPARPQSAASARRKADSRPPSGXXXXXXXXXXSAGGGARRPRQERWGG---EGG---GEIRSKQIEPKSQGSGRREEYFDRGVPKHEPSPRPASASLAEGDRGVRYRTRLDSVYALQMRAMQRLQKRRAQSAHKRSPERPASGGCEGISTGQFKSRYSGLDRFVLARTGEGARDGGAAAQVGASRFGDGVPFYG 1041          
BLAST of mRNA_S-firma_F_contig1037.527.1 vs. uniprot
Match: A0A835YQE8_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQE8_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.850e-13
Identity = 39/72 (54.17%), Postives = 55/72 (76.39%), Query Frame = 0
Query:    5 LMDEVFARFDPEGSGKVPVHRLVQHLLPSAERASHHLVPKTDEQGQATKTLLGKIFGMTGKRREMISLNGSG 76
            L+D++FA++    + K+ +H+LV+ LLP A   SHHLVPKT  Q  ATKTLL K+F MTGKRR++++LNG+G
Sbjct:  572 LVDQLFAKYADPRTDKISIHKLVRTLLPPAFDGSHHLVPKTSAQQAATKTLLHKVFEMTGKRRDIVNLNGAG 643          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1037.527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRG2_ECTSI3.470e-12450.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YQE8_9STRA2.850e-1354.17EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 224..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1037contigS-firma_F_contig1037:12015..15538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1037.527.1mRNA_S-firma_F_contig1037.527.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1037 12002..15538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1037.527.1 ID=prot_S-firma_F_contig1037.527.1|Name=mRNA_S-firma_F_contig1037.527.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=627bp
MDDHLMDEVFARFDPEGSGKVPVHRLVQHLLPSAERASHHLVPKTDEQGQ
ATKTLLGKIFGMTGKRREMISLNGSGVEDPQGQSLLERMAAGDKGDGEKI
RTQLAQRAKAAAAAATAVEIAAVEAARNGVKVTPATLAAAAARRRDNSPL
AFSGDVNANVPPGTSLSRASDPRPETTSTSSSGGSSEPGYGGSGQGGLAS
RDGGGDGRRRGGVGGGGWRQSCRETSLEEREKRLIEREAELRRREDAVAV
ADVTGDASAPAAMVPAKPRPPRRERDRPASATPLRQHGGNDRQQEKLRPG
SSNRSSSSSSQPASPAGSEDRRPRSARRSRNSVEASRARKEEAALVARCR
ALGAVRRKAATEAAARRREESREKTPSRPPETEANETSGTAGHAAPGRSP
ASESRHRSDGSSPTSAVARPGEHGAAAEAPAAAAAAAAAPRTPRRPQSAA
ATRRPGGCPHPTSRPQSASTARSNGGRGGDGARAGHWGGATREGGTGPNK
VRKEASPRSESVDGQERLGTGAPARGSSRRPASAGVPVGDRGERYRKRLD
SAYAMQMRSMQRLEKRRAQSSHRRSPERPASGGCEGVSTGQFKSRYSGLD
RFVLANRVAAMPTGASRFGGGVPFYG*
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