prot_S-firma_M_contig9882.20868.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9882.20868.1
Unique Nameprot_S-firma_M_contig9882.20868.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length133
Homology
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BLAST of mRNA_S-firma_M_contig9882.20868.1 vs. uniprot
Match: D8LI42_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI42_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.920e-26
Identity = 62/70 (88.57%), Postives = 65/70 (92.86%), Query Frame = 0 
Query:    8 GQAATVRNADAVMVVLGVLPYLSEEIAWAALGALNQVVRAGGFAEAEALVAAGVARKAADVLAKALHAQT 77
            GQ A VRNADAVMVVLGVLPYLSE+ AWAALGALNQVVRAGGFAEAEALVAAGV R AADVLAKALH++T
Sbjct: 1330 GQHAPVRNADAVMVVLGVLPYLSEDTAWAALGALNQVVRAGGFAEAEALVAAGVVRMAADVLAKALHSRT 1399
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BLAST of mRNA_S-firma_M_contig9882.20868.1 vs. uniprot
Match: A0A6H5KQH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH9_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 2.640e-26
Identity = 70/101 (69.31%), Postives = 75/101 (74.26%), Query Frame = 0 
Query:    8 GQAATVRNADAVMVVLGVLPYLSEEIAWAALGALNQVVRAGGFAEAEALVAAGVARKAADVLAKALHAQT-------------TSGGRRGSIGGTDPTAGA 95
            GQ A VRNADAVMVVLGVLPYLSE+IAWAALGALNQVVRAG FAEAEALVAAGV R AADVLAKALH++T             ++GG R    GT   AGA
Sbjct: 1384 GQHAPVRNADAVMVVLGVLPYLSEDIAWAALGALNQVVRAGRFAEAEALVAAGVVRMAADVLAKALHSRTVRANNKRRPDSRTSTGGARDDATGTPWDAGA 1484
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9882.20868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LI42_ECTSI1.920e-2688.57Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KQH9_9PHAE2.640e-2669.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9882contigS-firma_M_contig9882:1089..1487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9882.20868.1mRNA_S-firma_M_contig9882.20868.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9882 1089..1489 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9882.20868.1 ID=prot_S-firma_M_contig9882.20868.1|Name=mRNA_S-firma_M_contig9882.20868.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=133bp
GGGANDDGQAATVRNADAVMVVLGVLPYLSEEIAWAALGALNQVVRAGGF
AEAEALVAAGVARKAADVLAKALHAQTTSGGRRGSIGGTDPTAGASRNLG
VSDSAVPGEEEGGGGGAASAAIVRSGRAFRRPS
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