prot_S-firma_M_contig9781.20768.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9781.20768.1
Unique Nameprot_S-firma_M_contig9781.20768.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length100
Homology
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BLAST of mRNA_S-firma_M_contig9781.20768.1 vs. uniprot
Match: A0A6H5KKG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKG2_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.410e-17
Identity = 50/91 (54.95%), Postives = 58/91 (63.74%), Query Frame = 0 
Query:    1 HVTASLAGVVSAWMAGAAXXXXXXXXXXXXXLRSAAAADLESHVKALAVSKTKEVTGTGA---GGAWTPGMTTIALSGIRAWDEKWTEVFP 88
            HVTA++   V  WMA AA             +RS  AADLE+H KALAVSKTKEVTG G    GG WT GMT IAL+GI AW +KW E++P
Sbjct:  469 HVTAAVTENVREWMAAAAAEAAAAAMSNG--VRSVTAADLEAHAKALAVSKTKEVTGGGGRXGGGVWTAGMTRIALAGIEAWKDKWREIYP 557
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BLAST of mRNA_S-firma_M_contig9781.20768.1 vs. uniprot
Match: D7G140_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G140_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 6.660e-17
Identity = 49/91 (53.85%), Postives = 58/91 (63.74%), Query Frame = 0 
Query:    1 HVTASLAGVVSAWMAGAAXXXXXXXXXXXXXLRSAAAADLESHVKALAVSKTKEVTG---TGAGGAWTPGMTTIALSGIRAWDEKWTEVFP 88
            HVTA++   V  WMA AA             +RS  AADLE+H KALAVSKTKEVTG    G GG W+ GMT IAL+G+ AW +KW EV+P
Sbjct:  451 HVTAAVTENVREWMAAAAAEAAAAAMSNG--VRSVTAADLEAHAKALAVSKTKEVTGGGGRGGGGVWSAGMTRIALAGMEAWHDKWREVYP 539
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9781.20768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKG2_9PHAE1.410e-1754.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G140_ECTSI6.660e-1753.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..100
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.601
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9781contigS-firma_M_contig9781:3516..3815 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9781.20768.1mRNA_S-firma_M_contig9781.20768.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9781 3516..3815 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9781.20768.1 ID=prot_S-firma_M_contig9781.20768.1|Name=mRNA_S-firma_M_contig9781.20768.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=100bp
HVTASLAGVVSAWMAGAAAQAAAAVAASGGGLRSAAAADLESHVKALAVS
KTKEVTGTGAGGAWTPGMTTIALSGIRAWDEKWTEVFPGSGGGGDAGDSG
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