prot_S-firma_M_contig976.20750.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig976.20750.1
Unique Nameprot_S-firma_M_contig976.20750.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length105
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig976.20750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..93
NoneNo IPR availableTMHMMTMhelixcoord: 75..97
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig976contigS-firma_M_contig976:25347..25661 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig976.20750.1mRNA_S-firma_M_contig976.20750.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig976 25193..25759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig976.20750.1 ID=prot_S-firma_M_contig976.20750.1|Name=mRNA_S-firma_M_contig976.20750.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=105bp
MLASRFVVGGVGMWTCVHPPVLAWPVYCCTAVLLLASFCRFGPCWMSCHG
VESSVSSTIDVVFGIRRQPKMRARFRCALLHAVFCWFVLYYVSPGCLNPT
YTVR*
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