prot_S-firma_M_contig976.20749.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig976.20749.1
Unique Nameprot_S-firma_M_contig976.20749.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length268
Homology
BLAST of mRNA_S-firma_M_contig976.20749.1 vs. uniprot
Match: A0A6H5J746_9PHAE (UBA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J746_9PHAE)

HSP 1 Score: 398 bits (1022), Expect = 1.110e-135
Identity = 188/250 (75.20%), Postives = 219/250 (87.60%), Query Frame = 0
Query:    1 YRVWSSTCPFVARSTMLGIGVSWLLSLFLPQLDMALRSGIEFTISHFEVYRLITTVFCSGGLMTVIFGLMSFNRIGPNLERSLGSTGLLALMAVLTVVTNAAFIGVCGLLVMLGNKYAVYFTSGGIWNLIIALTAVECMATPDTPRRFFILPWDIPGRYYPLFLACMLGIMRGSFLDLFCAVGIGYAYADGRLERVKPSRSRLANWESGCLANFVQRPGYIISGSAMGAAAYGTPLNNPADHPSNQRNDG 250
            YRVW+STCPF AR TM+GI  S+LLS FLPQLD+AL +    TI  FEVYRL+TTVFCSGGL+TVIFGLMSFN +GPNLERSLGSTGLLALM  LT +TN AFI +C +LV++G K   +++S GIWNL+IAL AVECMATPD PRRFFILPWDIPG+YYPLFLAC+   MRGS++DLFCA GIGYAYADGRL+R+KPSRS+LA+WESGC+ANFV+RPGYI+SG+AMGAAA+GTPLNNPADHPSNQR +G
Sbjct:   17 YRVWASTCPFTARCTMVGIVGSYLLSFFLPQLDLALSNSPFRTIESFEVYRLVTTVFCSGGLLTVIFGLMSFNSVGPNLERSLGSTGLLALMVTLTALTNLAFIALCYVLVIMGEKKYAFYSSKGIWNLLIALIAVECMATPDVPRRFFILPWDIPGKYYPLFLACLFSFMRGSWMDLFCAAGIGYAYADGRLDRLKPSRSKLASWESGCMANFVERPGYIVSGAAMGAAAFGTPLNNPADHPSNQRAEG 266          
BLAST of mRNA_S-firma_M_contig976.20749.1 vs. uniprot
Match: A0A835Z2V1_9STRA (UBA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2V1_9STRA)

HSP 1 Score: 194 bits (493), Expect = 6.120e-56
Identity = 105/240 (43.75%), Postives = 146/240 (60.83%), Query Frame = 0
Query:    1 YRVWSSTCPFVARSTMLGIGVSWLLSLFLPQLDMALRSGIEFTISHFEVYRLITTVFCSGGLMTVIFGLMSFNRIGPNLERSLGSTGLLALMAVLTVVTNAAFIGVCGLLVMLGNKYAVYFTSGGIWNLIIALTAVECMATPDTPRRFFILPWDIPGRYYPLFLACMLGIMRGSFLDLFCAVGIGYAYADGRLERVKPSRSRLANWESGCLANFVQRPGYIISGSAMGAAAYGTPLNNPA 240
            Y  W+ST PFV RS  +   V +LL +F+  LD+AL + + +TI   EVYR+ T        +T+IFG+M  +++GP +E SLGS  LLALMA+L V  N+AF+    L   LGN+ A    + G+WNL++ L  V+CM  PD PR+ F  P +IP +YYPL L  +  IM G  +D+  A+  GYA+A G+L+ +KPS SR+  WE+GCL NF  R GYI +           P+NNPA
Sbjct:   20 YNGWASTKPFVTRSMCILQVVLFLLGMFVD-LDLALNNSLHYTIYSLEVYRIFTASLWCTSFITLIFGVMVLSQMGPKMEYSLGSARLLALMAILDVAANSAFLLFGLLSTALGNRAAELSAAQGLWNLLMPLIVVDCMQMPDFPRKLFFFPCEIPSKYYPLALFALFSIMGGVRVDMALALATGYAFAFGKLDCLKPSISRVQGWENGCLRNFTSRQGYITATGTQQEPWQ--PVNNPA 256          
BLAST of mRNA_S-firma_M_contig976.20749.1 vs. uniprot
Match: UPI001C4C936D (rhomboid-like protein 15 isoform X3 n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4C936D)

HSP 1 Score: 85.5 bits (210), Expect = 2.090e-15
Identity = 68/239 (28.45%), Postives = 113/239 (47.28%), Query Frame = 0
Query:    4 WSSTCPFVARSTMLGIGVSWLLSLFL--PQLDMALRSGIEFTISHFEVYRLITTVFCSGGLMTVIFGLMSFNRIGPNLERSLGSTGLLALMAVLTVVTNAAFIGVCGLLVMLGNKYAVYFTSG----GIWNLIIALTAVECMATPDTPRRFFILPWDIPGRYYPLFLACMLGIMRG--SFLDLFCAVGIGYAYADGRLERVKPSRSRLANWESGCLANF-VQRPGYIISGSAMGAAAYG 233
            W ++ PF+    +   G+ +L+ L +          S  E  ISHF+VYR+ T+V   G L+ V+F +++   +G  LER +GS  LL LM +L  + N+ F  +  LLV     +   F       G   ++ A+  +E   +    R  F L +++P ++Y   L  +   +    SFL   C +  G+AY  G L  + P  S  ++ ES  + +F V+RP +I+     G   YG
Sbjct:   18 WWASVPFITSGIIFTCGIIYLVCLLVGYDSFSQICFSPFEI-ISHFQVYRMYTSVLFHGSLLHVLFNMLALVPLGTELERIMGSVRLLYLMLLLATI-NSIFHLIIALLVANNPLHPFPFLETECAIGFSGILFAMIVIETSLSGVQSRSVFGL-FNVPAKWYAWILLILFQFLASNVSFLGHLCGILSGFAYTSGLLNYLLPGPSFYSSIESSSILSFCVRRPRFIL---CTGGTTYG 250          
BLAST of mRNA_S-firma_M_contig976.20749.1 vs. uniprot
Match: UPI001C4AEC66 (rhomboid-like protein 15 isoform X1 n=6 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4AEC66)

HSP 1 Score: 85.5 bits (210), Expect = 2.180e-15
Identity = 68/239 (28.45%), Postives = 113/239 (47.28%), Query Frame = 0
Query:    4 WSSTCPFVARSTMLGIGVSWLLSLFL--PQLDMALRSGIEFTISHFEVYRLITTVFCSGGLMTVIFGLMSFNRIGPNLERSLGSTGLLALMAVLTVVTNAAFIGVCGLLVMLGNKYAVYFTSG----GIWNLIIALTAVECMATPDTPRRFFILPWDIPGRYYPLFLACMLGIMRG--SFLDLFCAVGIGYAYADGRLERVKPSRSRLANWESGCLANF-VQRPGYIISGSAMGAAAYG 233
            W ++ PF+    +   G+ +L+ L +          S  E  ISHF+VYR+ T+V   G L+ V+F +++   +G  LER +GS  LL LM +L  + N+ F  +  LLV     +   F       G   ++ A+  +E   +    R  F L +++P ++Y   L  +   +    SFL   C +  G+AY  G L  + P  S  ++ ES  + +F V+RP +I+     G   YG
Sbjct:   18 WWASVPFITSGIIFTCGIIYLVCLLVGYDSFSQICFSPFEI-ISHFQVYRMYTSVLFHGSLLHVLFNMLALVPLGTELERIMGSVRLLYLMLLLATI-NSIFHLIIALLVANNPLHPFPFLETECAIGFSGILFAMIVIETSLSGVQSRSVFGL-FNVPAKWYAWILLILFQFLASNVSFLGHLCGILSGFAYTSGLLNYLLPGPSFYSSIESSSILSFCVRRPRFIL---CTGGTTYG 250          
BLAST of mRNA_S-firma_M_contig976.20749.1 vs. uniprot
Match: A0A482UV15_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UV15_9ARCH)

HSP 1 Score: 79.0 bits (193), Expect = 1.650e-13
Identity = 33/83 (39.76%), Postives = 53/83 (63.86%), Query Frame = 0
Query:  127 WNLIIALTAVECMATPDTPRRFFILPWDIPGRYYPLFLACMLGIMRGS-FLDLFCAVGIGYAYADGRLERVKPSRSRLANWES 208
            W ++ AL  ++CM+TPDTPRR   +P+DIP +Y PL L  ++ ++ GS +     ++G+GYA   G ++R +PS   LA  E+
Sbjct:  193 WTVLFALLTLDCMSTPDTPRRLLCIPYDIPSKYLPLVLYALVCVLSGSLYTSYLISMGMGYAVCMGYMDRCRPSSQYLAGLEA 275          
BLAST of mRNA_S-firma_M_contig976.20749.1 vs. uniprot
Match: A0A061EXY1_THECC (RHOMBOID-like protein 15 n=6 Tax=Malvaceae TaxID=3629 RepID=A0A061EXY1_THECC)

HSP 1 Score: 79.0 bits (193), Expect = 4.190e-13
Identity = 65/237 (27.43%), Postives = 112/237 (47.26%), Query Frame = 0
Query:    4 WSSTCPFVARSTMLGIGVSWLLSL-----------FLPQLDMALRSGIEFTISHFEVYRLITTVFCSGGLMTVIFGLMSFNRIGPNLERSLGSTGLLALMAVLTVVTNAAFIGVCGLLV----MLGNKYAVYFTSGGIWNLIIALTAVECMATPDTPRRFFILPWDIPGRYYPLFLACMLGIMRG--SFLDLFCAVGIGYAYADGRLERVKPSRSRLANWESGC-LANFVQRPGYII 222
            W    PF+  + ++  GV +L+ L           FLP          E  +SHF+VYR+ T++   G L+ V+F +++   +G  LER +GS  LL  M +L   +NA F  +  L+V     L +KY +   + G   ++ ++  +E   +    R  F L +++P ++Y   L  +  ++    S L   C +  G+AY  G    + P  S  +  ES   LA+ V+RP +I+
Sbjct:   18 WWDNIPFLTSAVVIVCGVIYLVCLLVGYDSFYEICFLP----------EALVSHFQVYRIYTSIIFHGSLLHVLFNMLALVPLGSELERIMGSIRLLY-MIILLATSNAIFHLIIALVVAHNPFLTDKYLMNECAIGFSGILFSMIVIETSLSGVQSRSVFGL-FNVPAKWYAFILLVVFQLLMSNVSLLGHLCGILSGFAYTYGLFNFLIPGPSFYSAIESSSWLASCVRRPKFIL 242          
BLAST of mRNA_S-firma_M_contig976.20749.1 vs. uniprot
Match: A0A8J5M0A9_ZINOF (UBA domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5M0A9_ZINOF)

HSP 1 Score: 78.6 bits (192), Expect = 6.610e-13
Identity = 61/222 (27.48%), Postives = 105/222 (47.30%), Query Frame = 0
Query:    4 WSSTCPFVARSTMLGIGVSWLLSLFL--PQLDMALRSGIEFTISHFEVYRLITTVFCSGGLMTVIFGLMSFNRIGPNLERSLGSTGLLALMAVLTVVTNAAFIGVCGLLVMLGNKYAVYFTSG----GIWNLIIALTAVECMATPDTPRRFFILPWDIPGRYYPLFLACMLGIMRG--SFLDLFCAVGIGYAYADGRLERVKPSRSRLANWESGCLANFVQR 217
            W ++ PF+    +   G+ +L+ L +          S  E  ISHF+VYR+ T+V   G L+ V+F +++   +G  LER +GS  LL LM +L  + N+ F  +  LLV     +   F       G   ++ A+  +E   +    R  F L +++P ++Y   L  +   +    SFL   C +  G+AY +G L  + P  S  ++ ES  +   ++R
Sbjct:   18 WWASVPFITSGIIFTCGIIYLVCLLVGYDSFSQICFSPFEI-ISHFQVYRMYTSVLFHGSLLHVLFNMLALVPLGTELERIMGSVRLLYLMLLLATI-NSIFHLIIALLVANNPLHPFPFLETECAIGFSGILFAMIVIETSLSGVQSRSVFGL-FNVPAKWYAWILLILFQFLASNVSFLGHLCGILSGFAYTNGLLNYLLPGPSFYSSIESSSILASLER 236          
BLAST of mRNA_S-firma_M_contig976.20749.1 vs. uniprot
Match: A0A7N2M416_QUELO (UBA domain-containing protein n=5 Tax=Fagaceae TaxID=3503 RepID=A0A7N2M416_QUELO)

HSP 1 Score: 78.2 bits (191), Expect = 7.590e-13
Identity = 60/195 (30.77%), Postives = 98/195 (50.26%), Query Frame = 0
Query:   44 ISHFEVYRLITTVFCSGGLMTVIFGLMSFNRIGPNLERSLGSTGLLALMAVLTVVTNAAFIGVCGLLV---------MLGNKYAVYFTSGGIWNLIIALTAVECMATPDTPRRFFILPWDIPGRYYPLFLACMLGIMRG--SFLDLFCAVGIGYAYADGRLERVKPSRS-----RLANWESGCLANFVQRPGYII 222
            +SHF+VYR+ T++F  G L+ V+F +++   +G  LER +GS  LL  M +L   TNA F  +  LLV          L N+ A+ F SG ++++I+  T++        PRR     + +P ++YP  L  +  ++    S L   C +  G+AY  G    + P  S       ++W S C    V+RP +I+
Sbjct:   59 LSHFQVYRIYTSIFFHGSLLHVLFNMLALVPLGSELERIMGSVRLLY-MIILLATTNAIFHLLIALLVGHNPFHPFLYLMNECAIGF-SGILFSMIVIETSLS-----GEPRRSVFGLFHVPAQWYPWILLILFQLLASNVSLLGHLCGILSGFAYTYGIFNFLIPGASFYSAIEASSWLSSC----VRRPKFIL 242          
BLAST of mRNA_S-firma_M_contig976.20749.1 vs. uniprot
Match: A0A2P5B7Z7_PARAD (Peptidase n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5B7Z7_PARAD)

HSP 1 Score: 78.2 bits (191), Expect = 7.590e-13
Identity = 62/233 (26.61%), Postives = 113/233 (48.50%), Query Frame = 0
Query:    4 WSSTCPFVARSTMLGIGVSWLLSLFLPQLDMA----LRSGIEFTISHFEVYRLITTVFCSGGLMTVIFGLMSFNRIGPNLERSLGSTGLLALMAVLTVVTNAAFIGVCGLLVMLGNKYAVYFTSGGIWN--------LIIALTAVECMATPDTPRRFFILPWDIPGRYYP--LFLACMLGIMRGSFLDLFCAVGIGYAYADGRLERVKPSRSRLANWESGCLANFVQRPGYII 222
            W  + PF+  + ++  G+ + + L +          L S +   +SHF+VYR+ T++   G L+ V+F +M+   +G  LER +GS  LL L+ +L  ++NA F     LL+ L   Y  ++T   + N        ++ ++  +E   +    R  F L +++P ++Y   L +   L +   S L   C +  G+AY  G    + P  S  +  E+  LA+ V+RP +I+
Sbjct:   18 WWESIPFLTSAVVIVCGMIYFVCLLVGYDSFFEVCFLPSAV---VSHFQVYRVFTSILFHGSLLHVLFNMMALVPLGSELERIMGSVRLLFLI-ILLAISNALF----HLLIALVVAYNPFYTDQYLMNECAIGFSGILFSMIVIETSLSGVQSRSVFGL-FNVPAKWYAWILLIVFQLLMTNVSLLGHLCGILSGFAYTYGLFNFLMPGASFYSAIEASLLASCVRRPKFIL 241          
BLAST of mRNA_S-firma_M_contig976.20749.1 vs. uniprot
Match: B9H9X7_POPTR (UBA domain-containing protein n=8 Tax=Saliceae TaxID=238069 RepID=B9H9X7_POPTR)

HSP 1 Score: 75.1 bits (183), Expect = 8.740e-12
Identity = 62/227 (27.31%), Postives = 110/227 (48.46%), Query Frame = 0
Query:    4 WSSTCPFVARSTMLGIGVSWLLSLFLPQLDMALRSGIEFTI-SHFEVYRLITTVFCSGGLMTVIFGLMSFNRIGPNLERSLGSTGLLALMAVLTVVTNAAFIGVCGLLVMLGN----KYAVYFTSGGIWNLIIALTAVECMATPDTPRRFFILPWDIPGRYYP--LFLACMLGIMRGSFLDLFCAVGIGYAYADGRLERVKPSRSRLANWE-SGCLANFVQRPGYII 222
            W  + PF+  + ++  GV +L+ L +          +   + SHF+VYR+ T++F  G L+ V+F +++   +G  LER +GS  L A + +L   TNA F     LLV        +Y +   + G   ++ ++  +E   +    R  F L +++P ++Y   L +A  L +   S L   C +  G+AY  G    + P  S  +  E S  L++ V+RP +I+
Sbjct:   18 WWESIPFLTSAVVVVCGVIYLVCLLIGYDSFYEICFLPTAVVSHFQVYRIYTSIFFHGSLLHVLFNMLALVPLGSELERIMGSIRL-AYLIILLATTNAIFHLFIALLVAHNPFHPYQYLLDECAIGFSGILFSMIVIETSLSGVQSRSVFGL-FNVPAKWYAFILLVAFQLLMTNVSLLGHLCGILSGFAYTYGLFNFLMPGASSFSAIEASSWLSSCVRRPKFIL 242          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig976.20749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J746_9PHAE1.110e-13575.20UBA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z2V1_9STRA6.120e-5643.75UBA domain-containing protein n=1 Tax=Tribonema mi... [more]
UPI001C4C936D2.090e-1528.45rhomboid-like protein 15 isoform X3 n=2 Tax=Zingib... [more]
UPI001C4AEC662.180e-1528.45rhomboid-like protein 15 isoform X1 n=6 Tax=Zingib... [more]
A0A482UV15_9ARCH1.650e-1339.76Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A061EXY1_THECC4.190e-1327.43RHOMBOID-like protein 15 n=6 Tax=Malvaceae TaxID=3... [more]
A0A8J5M0A9_ZINOF6.610e-1327.48UBA domain-containing protein n=1 Tax=Zingiber off... [more]
A0A7N2M416_QUELO7.590e-1330.77UBA domain-containing protein n=5 Tax=Fagaceae Tax... [more]
A0A2P5B7Z7_PARAD7.590e-1326.61Peptidase n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A... [more]
B9H9X7_POPTR8.740e-1227.31UBA domain-containing protein n=8 Tax=Saliceae Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 10..182
e-value: 2.7E-6
score: 29.2
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 45..161
e-value: 1.4E-6
score: 28.4
NoneNo IPR availablePANTHERPTHR11009:SF25RHOMBOID DOMAIN-CONTAINING PROTEIN 2coord: 4..231
NoneNo IPR availablePANTHERPTHR11009DER1-LIKE PROTEIN, DERLINcoord: 4..231
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 70..88
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..189
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 190..268
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 143..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..142
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 9..173
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
NoneNo IPR availableTMHMMTMhelixcoord: 10..29
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
NoneNo IPR availableTMHMMTMhelixcoord: 160..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig976contigS-firma_M_contig976:21404..25185 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig976.20749.1mRNA_S-firma_M_contig976.20749.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig976 21404..25186 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig976.20749.1 ID=prot_S-firma_M_contig976.20749.1|Name=mRNA_S-firma_M_contig976.20749.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=268bp
YRVWSSTCPFVARSTMLGIGVSWLLSLFLPQLDMALRSGIEFTISHFEVY
RLITTVFCSGGLMTVIFGLMSFNRIGPNLERSLGSTGLLALMAVLTVVTN
AAFIGVCGLLVMLGNKYAVYFTSGGIWNLIIALTAVECMATPDTPRRFFI
LPWDIPGRYYPLFLACMLGIMRGSFLDLFCAVGIGYAYADGRLERVKPSR
SRLANWESGCLANFVQRPGYIISGSAMGAAAYGTPLNNPADHPSNQRNDG
GGGGGGLSSMFGGGGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
IPR035952Rhomboid-like_sf