prot_S-firma_M_contig9748.20739.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9748.20739.1
Unique Nameprot_S-firma_M_contig9748.20739.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length118
Homology
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BLAST of mRNA_S-firma_M_contig9748.20739.1 vs. uniprot
Match: D8LT04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT04_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 8.680e-45
Identity = 85/130 (65.38%), Postives = 101/130 (77.69%), Query Frame = 0 
Query:    1 MLRPRLGAHGHALLCRTKGIGSGSVRR-GRRRLSTTSEPSKPAGSPNAADEEPGWPLKYKLAGGAVLGTIIPWMFSYAVANDPGSRRLVAKLSPGL-----------VQWFRNRQKGGHFFDEDPKRVEY 118
            +L+PRL  HG A L R K I  G +R+ G RRLSTT+EP+KP+   + A EEPGWPLKYK+AGGA+LGTIIP++FSYA+ANDPGSRRLV+KLSPG+           VQWFR RQKGGHFFDEDPKR+EY
Sbjct:    4 VLQPRLPTHGRAPLRRPKVI-EGCIRQHGHRRLSTTAEPAKPS---SPAAEEPGWPLKYKVAGGAILGTIIPYIFSYAMANDPGSRRLVSKLSPGIATTLPGGGRLGVQWFRQRQKGGHFFDEDPKRLEY 129
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9748.20739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT04_ECTSI8.680e-4565.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9748contigS-firma_M_contig9748:337..1741 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9748.20739.1mRNA_S-firma_M_contig9748.20739.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9748 337..1741 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9748.20739.1 ID=prot_S-firma_M_contig9748.20739.1|Name=mRNA_S-firma_M_contig9748.20739.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=118bp
MLRPRLGAHGHALLCRTKGIGSGSVRRGRRRLSTTSEPSKPAGSPNAADE
EPGWPLKYKLAGGAVLGTIIPWMFSYAVANDPGSRRLVAKLSPGLVQWFR
NRQKGGHFFDEDPKRVEY
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