prot_S-firma_M_contig9705.20701.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9705.20701.1
Unique Nameprot_S-firma_M_contig9705.20701.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length149
Homology
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: D8LIL5_ECTSI (Cyclin D1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIL5_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 1.180e-95
Identity = 136/149 (91.28%), Postives = 143/149 (95.97%), Query Frame = 0
Query:    1 MPMISELADATEMSLTTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 149
            MPMISELADATEMSLTT IVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVT P+DTCQGRRLVEKVVTYMNKYVDFFANLCQQ YQFQRYKPSHIAAAAIL ARRALCIKP+WRDELT+LTGYKLEE+ +CGE+LW+FYEKMFP H
Sbjct:  134 MPMISELADATEMSLTTSIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTAPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQGYQFQRYKPSHIAAAAILTARRALCIKPMWRDELTDLTGYKLEEISDCGEDLWHFYEKMFPLH 282          
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A835ZBR6_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR6_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.110e-62
Identity = 98/149 (65.77%), Postives = 113/149 (75.84%), Query Frame = 0
Query:    1 MPMISELADATEMSLTTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 149
            MPM+SE+A A E  LTT +VT+GEL L +  L WD+SRVTAMHFLGYY  QGVT   D CQGR LV KV  YM KYV+FFANLCQQDY FQR++PS IAAA+ILAARRALCI P+WR EL  LTG    ++  C EE+W FYE MFP+H
Sbjct:   76 MPMVSEMAIAAETRLTTGMVTQGELSLARG-LGWDISRVTAMHFLGYYLHQGVTFLSDECQGRALVTKVTRYMKKYVEFFANLCQQDYSFQRHRPSTIAAASILAARRALCIAPLWRPELERLTGCAPRDIQACAEEVWAFYEAMFPTH 223          
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A1E7FL21_9STRA (Cyclin-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FL21_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.760e-37
Identity = 70/151 (46.36%), Postives = 96/151 (63.58%), Query Frame = 0
Query:    2 PMISELADATEMSLT--TPIVTR-GELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 149
            P I EL   T++     TP+  R GEL++++  L W +  V  +H +GY+ ++G    EDT QGR L+EK+  YM KY DFF NL  Q+Y FQ+Y PSH+AAA ILA+R AL I+P WR EL  LTGY   E+ +    +W++YE+ FP H
Sbjct:   88 PPIPELLRLTKLGNAGHTPLSFRDGELEVLRY-LNWQLRAVPPIHVVGYFLAKGAVFYEDTWQGRSLIEKIPKYMKKYADFFCNLTLQEYSFQQYLPSHLAAAVILASRVALNIEPRWRPELVRLTGYSEIEITDAFHHVWSYYEEQFPGH 237          
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: B8BTM7_THAPS (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTM7_THAPS)

HSP 1 Score: 136 bits (343), Expect = 1.900e-36
Identity = 65/151 (43.05%), Postives = 98/151 (64.90%), Query Frame = 0
Query:    2 PMISELADATEMSL---TTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 149
            P I +L   T++S    T+     GE+ +++N L W +  +  +H +GYY S+G T  +D  QGR L+EK+  Y+ KY +FF NL  Q+Y FQ+Y P+H+AAA +LA+R AL I P WR EL ELTG++ +E+ E  + +W++YE+ FP H
Sbjct:  157 PHIPDLLRLTKLSSVGHTSLSFREGEVQVLRN-LGWKLRAIPPLHVIGYYLSKGATFVDDAWQGRSLIEKIPKYIKKYAEFFCNLTLQEYSFQQYLPTHLAAAILLASREALQISPRWRPELEELTGFEEKEIGEAFQHVWSYYEEQFPGH 306          
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A7S1YXT2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YXT2_TRICV)

HSP 1 Score: 135 bits (341), Expect = 2.310e-36
Identity = 66/151 (43.71%), Postives = 96/151 (63.58%), Query Frame = 0
Query:    2 PMISELADATEM---SLTTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 149
            P I EL   T++     T      GEL ++Q+ L W +  +  +H +GYY S+G T  +DT QGR L+EK+  Y+ KYV+FF NL  Q+Y FQ+Y P+H+AAA +LA+R AL ++P WR EL  +TGY+  E+V+    +W +YE+ FP H
Sbjct:  134 PPIPELLQLTKLCNSGHTALSFREGELAVLQH-LGWRLRAIPPLHIVGYYLSKGATFEDDTWQGRALIEKIPKYVKKYVEFFCNLTLQEYSFQQYLPTHLAAAILLASRVALQLEPRWRPELARVTGYEDHEIVDVFTHVWRYYEEQFPGH 283          
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A7S0FMS6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMS6_9STRA)

HSP 1 Score: 130 bits (327), Expect = 5.990e-36
Identity = 58/133 (43.61%), Postives = 88/133 (66.17%), Query Frame = 0
Query:   17 TPIVTR-GELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPS 148
            TP+  R GE++++++ L W +  + A+H +GYY S+G    +DT QGR L+EK+  Y+ KY DFF NL  Q+Y FQ+Y PS +AAA ++A+R AL + P WR E+T LTGY+  E+    + +W +Y + FP 
Sbjct:    6 TPLAFRDGEVEVLKH-LNWTLRAIPALHVVGYYLSKGAVFVDDTWQGRDLIEKIPRYVKKYADFFCNLTMQEYSFQKYLPSQLAAAILMASREALSVAPRWRPEMTALTGYEESEITPIFDHVWKYYAEQFPD 137          
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A7S3L9W8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L9W8_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.740e-35
Identity = 65/146 (44.52%), Postives = 97/146 (66.44%), Query Frame = 0
Query:    4 ISELADATEMSLTTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 149
            +++LA A   SLT      GE+ ++++ L W +    A+H +GYY S+G    +DT QGR L+EK+  Y+ KY +FF NL  QDY+FQ+Y P+ +AAA +LA+R AL ++P WR EL +LTGY+ EE+V+    +W +YE+ FP H
Sbjct:  190 LTKLASAGHNSLT---FREGEVQVLKH-LGWRLRAFPAIHVIGYYLSKGACFEDDTWQGRGLIEKIPRYVKKYAEFFCNLTLQDYEFQQYLPTQLAAAILLASRVALQLEPRWRPELVQLTGYEEEEIVDIFHHVWAYYEEQFPGH 331          
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A7S0A123_9STRA (Hypothetical protein n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0A123_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.300e-34
Identity = 60/151 (39.74%), Postives = 98/151 (64.90%), Query Frame = 0
Query:    2 PMISELADATEMSL---TTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 149
            P I +L   T++++   T+     GELD+++  L W +  +  +HF+GY+ ++G    +DT QGR L+EK+  Y+ KY +FF NL  Q+Y FQ+Y PS +AAA +LA+R AL ++P WR EL  LTGY+ +++    + +W++Y++ FP H
Sbjct:   10 PPIPDLLQLTKLNVAGHTSYSFREGELDVLRY-LGWRLRAIPPIHFIGYFLAKGSVFVDDTWQGRPLIEKIPKYVKKYTEFFCNLTLQEYSFQQYLPSLLAAAILLASRTALQLEPRWRPELVRLTGYEEQDLSSAFQHVWSYYDEQFPGH 159          
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A7S2FS20_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FS20_9STRA)

HSP 1 Score: 126 bits (316), Expect = 4.930e-34
Identity = 61/141 (43.26%), Postives = 91/141 (64.54%), Query Frame = 0
Query:   15 LTTPI------VTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 149
            LTTPI      V   E+ ++Q RLE+++S VT MH + Y+  +GV   +D+  GR L++K+  Y+ KY +FFANLC QDY +Q++ PS +AAA + +AR AL + P+WR EL ELTG+  E+  +   ++W  Y   FP+H
Sbjct:    6 LTTPIKLAPAQVREWEIYVLQ-RLEYNMSMVTPMHCITYFNGRGVVFKDDSWNGRALIDKIPRYVQKYTEFFANLCMQDYLYQQFSPSLLAAAIVYSARHALSVAPLWRPELEELTGHCTEDAHQVFLKIWGLYSDTFPAH 145          
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A7S1E947_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E947_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.150e-33
Identity = 58/146 (39.73%), Postives = 99/146 (67.81%), Query Frame = 0
Query:    4 ISELADATEMSLTTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 149
            +++L++A   SL+      GE++++++ L W +     +H +GY+ ++GVT  +DT QGR L+EK+  Y+ KY +FF NL  Q+Y FQ+Y P+ +AAA +LA+R AL ++P WR EL +LTG++ +E+    + +W++YE+ FP H
Sbjct:   12 LTKLSNAGHSSLS---FRDGEVEVLRH-LGWRLRAFPPIHVIGYFLAKGVTFVDDTWQGRPLIEKIPRYVKKYAEFFCNLALQEYAFQQYLPTQLAAAVLLASRVALQLEPRWRPELAKLTGHEEKEITTIFQHVWSYYEEQFPGH 153          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIL5_ECTSI1.180e-9591.28Cyclin D1 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A835ZBR6_9STRA1.110e-6265.77Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A1E7FL21_9STRA1.760e-3746.36Cyclin-like protein n=1 Tax=Fragilariopsis cylindr... [more]
B8BTM7_THAPS1.900e-3643.05Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A7S1YXT2_TRICV2.310e-3643.71Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S0FMS6_9STRA5.990e-3643.61Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S3L9W8_9STRA1.740e-3544.52Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S0A123_9STRA1.300e-3439.74Hypothetical protein n=1 Tax=Rhizosolenia setigera... [more]
A0A7S2FS20_9STRA4.930e-3443.26Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1E947_9STRA1.150e-3339.73Hypothetical protein n=2 Tax=Thalassionema nitzsch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004367Cyclin, C-terminal domainSMARTSM01332Cyclin_C_2coord: 39..149
e-value: 4.0E-13
score: 59.6
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 39..142
e-value: 1.1E-16
score: 61.0
NoneNo IPR availableGENE3D1.10.472.10coord: 26..148
e-value: 6.7E-27
score: 96.3
NoneNo IPR availablePANTHERPTHR10177:SF253CYCLIN-B1-4coord: 70..143
IPR039361CyclinPANTHERPTHR10177CYCLINEcoord: 70..143
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 40..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9705contigS-firma_M_contig9705:1297..2833 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9705.20701.1mRNA_S-firma_M_contig9705.20701.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9705 1270..2833 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9705.20701.1 ID=prot_S-firma_M_contig9705.20701.1|Name=mRNA_S-firma_M_contig9705.20701.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=149bp
MPMISELADATEMSLTTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTS
QGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAA
AAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf
IPR039361Cyclin
IPR004367Cyclin_C-dom