mRNA_S-firma_M_contig9705.20701.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: D8LIL5_ECTSI (Cyclin D1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIL5_ECTSI) HSP 1 Score: 302 bits (774), Expect = 9.940e-102 Identity = 143/157 (91.08%), Postives = 151/157 (96.18%), Query Frame = 1
Query: 4 KYEEAECNMPMISELADATEMSLTTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 474
+YEEAECNMPMISELADATEMSLTT IVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVT P+DTCQGRRLVEKVVTYMNKYVDFFANLCQQ YQFQRYKPSHIAAAAIL ARRALCIKP+WRDELT+LTGYKLEE+ +CGE+LW+FYEKMFP H
Sbjct: 126 RYEEAECNMPMISELADATEMSLTTSIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTAPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQGYQFQRYKPSHIAAAAILTARRALCIKPMWRDELTDLTGYKLEEISDCGEDLWHFYEKMFPLH 282
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A835ZBR6_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR6_9STRA) HSP 1 Score: 215 bits (547), Expect = 5.460e-68 Identity = 106/158 (67.09%), Postives = 121/158 (76.58%), Query Frame = 1
Query: 1 AKYEEAECNMPMISELADATEMSLTTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 474
AKYEEAE NMPM+SE+A A E LTT +VT+GEL L + L WD+SRVTAMHFLGYY QGVT D CQGR LV KV YM KYV+FFANLCQQDY FQR++PS IAAA+ILAARRALCI P+WR EL LTG ++ C EE+W FYE MFP+H
Sbjct: 67 AKYEEAERNMPMVSEMAIAAETRLTTGMVTQGELSLARG-LGWDISRVTAMHFLGYYLHQGVTFLSDECQGRALVTKVTRYMKKYVEFFANLCQQDYSFQRHRPSTIAAASILAARRALCIAPLWRPELERLTGCAPRDIQACAEEVWAFYEAMFPTH 223
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A1E7FL21_9STRA (Cyclin-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FL21_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.510e-41 Identity = 77/161 (47.83%), Postives = 104/161 (64.60%), Query Frame = 1
Query: 1 AKYEEAECNMPMISELADATEMSLT--TPIVTR-GELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 474
AKYEEAE + P I EL T++ TP+ R GEL++++ L W + V +H +GY+ ++G EDT QGR L+EK+ YM KY DFF NL Q+Y FQ+Y PSH+AAA ILA+R AL I+P WR EL LTGY E+ + +W++YE+ FP H
Sbjct: 78 AKYEEAEEHCPPIPELLRLTKLGNAGHTPLSFRDGELEVLRY-LNWQLRAVPPIHVVGYFLAKGAVFYEDTWQGRSLIEKIPKYMKKYADFFCNLTLQEYSFQQYLPSHLAAAVILASRVALNIEPRWRPELVRLTGYSEIEITDAFHHVWSYYEEQFPGH 237
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: B8BTM7_THAPS (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTM7_THAPS) HSP 1 Score: 147 bits (371), Expect = 1.800e-40 Identity = 72/161 (44.72%), Postives = 106/161 (65.84%), Query Frame = 1
Query: 1 AKYEEAECNMPMISELADATEMSL---TTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 474
AKYEEAE + P I +L T++S T+ GE+ +++N L W + + +H +GYY S+G T +D QGR L+EK+ Y+ KY +FF NL Q+Y FQ+Y P+H+AAA +LA+R AL I P WR EL ELTG++ +E+ E + +W++YE+ FP H
Sbjct: 147 AKYEEAEEHCPHIPDLLRLTKLSSVGHTSLSFREGEVQVLRN-LGWKLRAIPPLHVIGYYLSKGATFVDDAWQGRSLIEKIPKYIKKYAEFFCNLTLQEYSFQQYLPTHLAAAILLASREALQISPRWRPELEELTGFEEKEIGEAFQHVWSYYEEQFPGH 306
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A7S1YXT2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YXT2_TRICV) HSP 1 Score: 146 bits (369), Expect = 2.120e-40 Identity = 73/161 (45.34%), Postives = 104/161 (64.60%), Query Frame = 1
Query: 1 AKYEEAECNMPMISELADATEM---SLTTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 474
AKYEEAE + P I EL T++ T GEL ++Q+ L W + + +H +GYY S+G T +DT QGR L+EK+ Y+ KYV+FF NL Q+Y FQ+Y P+H+AAA +LA+R AL ++P WR EL +TGY+ E+V+ +W +YE+ FP H
Sbjct: 124 AKYEEAEEHCPPIPELLQLTKLCNSGHTALSFREGELAVLQH-LGWRLRAIPPLHIVGYYLSKGATFEDDTWQGRALIEKIPKYVKKYVEFFCNLTLQEYSFQQYLPTHLAAAILLASRVALQLEPRWRPELARVTGYEDHEIVDVFTHVWRYYEEQFPGH 283
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A7S3L9W8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L9W8_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.710e-38 Identity = 73/164 (44.51%), Postives = 106/164 (64.63%), Query Frame = 1
Query: 1 AKYEEAECNMPMISELADATEM------SLTTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 474
AKYEEAE + P I +L T++ SLT GE+ ++++ L W + A+H +GYY S+G +DT QGR L+EK+ Y+ KY +FF NL QDY+FQ+Y P+ +AAA +LA+R AL ++P WR EL +LTGY+ EE+V+ +W +YE+ FP H
Sbjct: 172 AKYEEAEEHCPPIPDLLSLTKLASAGHNSLT---FREGEVQVLKH-LGWRLRAFPAIHVIGYYLSKGACFEDDTWQGRGLIEKIPRYVKKYAEFFCNLTLQDYEFQQYLPTQLAAAILLASRVALQLEPRWRPELVQLTGYEEEEIVDIFHHVWAYYEEQFPGH 331
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A7S0A123_9STRA (Hypothetical protein n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0A123_9STRA) HSP 1 Score: 137 bits (344), Expect = 4.230e-38 Identity = 66/160 (41.25%), Postives = 105/160 (65.62%), Query Frame = 1
Query: 4 KYEEAECNMPMISELADATEMSL---TTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 474
KYEEAE + P I +L T++++ T+ GELD+++ L W + + +HF+GY+ ++G +DT QGR L+EK+ Y+ KY +FF NL Q+Y FQ+Y PS +AAA +LA+R AL ++P WR EL LTGY+ +++ + +W++Y++ FP H
Sbjct: 1 KYEEAEEHCPPIPDLLQLTKLNVAGHTSYSFREGELDVLRY-LGWRLRAIPPIHFIGYFLAKGSVFVDDTWQGRPLIEKIPKYVKKYTEFFCNLTLQEYSFQQYLPSLLAAAILLASRTALQLEPRWRPELVRLTGYEEQDLSSAFQHVWSYYDEQFPGH 159
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A7S0FMS6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMS6_9STRA) HSP 1 Score: 130 bits (327), Expect = 8.280e-36 Identity = 58/133 (43.61%), Postives = 88/133 (66.17%), Query Frame = 1
Query: 76 TPIVTR-GELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPS 471
TP+ R GE++++++ L W + + A+H +GYY S+G +DT QGR L+EK+ Y+ KY DFF NL Q+Y FQ+Y PS +AAA ++A+R AL + P WR E+T LTGY+ E+ + +W +Y + FP
Sbjct: 6 TPLAFRDGEVEVLKH-LNWTLRAIPALHVVGYYLSKGAVFVDDTWQGRDLIEKIPRYVKKYADFFCNLTMQEYSFQKYLPSQLAAAILMASREALSVAPRWRPEMTALTGYEESEITPIFDHVWKYYAEQFPD 137
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A7S3QJF9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJF9_9STRA) HSP 1 Score: 135 bits (340), Expect = 9.310e-36 Identity = 68/161 (42.24%), Postives = 100/161 (62.11%), Query Frame = 1
Query: 1 AKYEEAECNMPMISELADATEMSL---TTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 474
AKYEEAE + P I +L T +S T+ GE++ ++ L W + + +HF+GY+ ++G +DT Q R L+EK+ Y+ KY DFF NL Q+Y FQ+Y PS +AAA +LA+R AL ++P WR ELT LTG + +++ LW +YE+ FP H
Sbjct: 158 AKYEEAEEHCPPIPDLLQLTRLSQAGHTSLSFRDGEVECLKF-LGWRLRAIPPIHFIGYFLAKGAIFQDDTWQDRNLIEKIPKYVKKYADFFCNLTLQEYSFQQYLPSELAAAILLASRVALQLQPRWRPELTTLTGQEESQIIHIFNHLWGYYEEQFPGH 317
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Match: A0A7S2M1N0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M1N0_9STRA) HSP 1 Score: 135 bits (339), Expect = 9.710e-36 Identity = 69/161 (42.86%), Postives = 102/161 (63.35%), Query Frame = 1
Query: 1 AKYEEAECNMPMISELADATEMSLT---TPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTMPEDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAAAILAARRALCIKPVWRDELTELTGYKLEEVVECGEELWNFYEKMFPSH 474
AKYEEAE + P I +L T++S + GE+++++ L W + V +H +GY+ S+G T +DT QGR L++K+ Y+ KY +FF NL Q+Y FQ+Y P+H+AAA ILA+R +L I P WR EL LTGY +E+ + +W +YE+ FP H
Sbjct: 145 AKYEEAEEHCPAIPDLLKLTKLSNVGHNSLSFRDGEVEVLKY-LGWKLRAVPPIHVVGYFLSKGATFEDDTWQGRALIDKIPKYVKKYAEFFCNLTLQEYSFQQYLPTHLAAAIILASRVSLQITPQWRPELQLLTGYSEDEIKGAFKHVWAYYEEQFPGH 304 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9705.20701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig9705.20701.1 >prot_S-firma_M_contig9705.20701.1 ID=prot_S-firma_M_contig9705.20701.1|Name=mRNA_S-firma_M_contig9705.20701.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=149bp MPMISELADATEMSLTTPIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSback to top mRNA from alignment at S-firma_M_contig9705:1270..2833+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig9705.20701.1 ID=mRNA_S-firma_M_contig9705.20701.1|Name=mRNA_S-firma_M_contig9705.20701.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=1564bp|location=Sequence derived from alignment at S-firma_M_contig9705:1270..2833+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig9705:1270..2833+ >mRNA_S-firma_M_contig9705.20701.1 ID=mRNA_S-firma_M_contig9705.20701.1|Name=mRNA_S-firma_M_contig9705.20701.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=894bp|location=Sequence derived from alignment at S-firma_M_contig9705:1270..2833+ (Sphaerotrichia firma Sfir_13m male)back to top |