prot_S-firma_M_contig9701.20698.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9701.20698.1
Unique Nameprot_S-firma_M_contig9701.20698.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length209
Homology
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BLAST of mRNA_S-firma_M_contig9701.20698.1 vs. uniprot
Match: A0A6H5JUR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUR1_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 7.300e-10
Identity = 43/89 (48.31%), Postives = 53/89 (59.55%), Query Frame = 0 
Query:   48 VRVQDS--AETVSEMQAQESHSLMVAIEHEGIAQVRAELEVEREMSDTVLTAPSLAEEHGFRTPLMAAVMRGDLSILTAVLRRFEWRFS 134
            ++V DS    T SE +A+ SH LM  IE   +  VR  L   +    ++LTAPSL  EH  RTPLMAAV RGDL I TA+L  F+  FS
Sbjct:    2 LQVSDSKLTRTYSEREARGSHGLMQMIERGTVDDVRTILLKTQPPDRSILTAPSLEAEHFQRTPLMAAVERGDLPIFTALLHYFDRLFS 90
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9701.20698.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JUR1_9PHAE7.300e-1048.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 48..199
e-value: 2.3E-6
score: 29.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 68..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9701contigS-firma_M_contig9701:545..3280 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9701.20698.1mRNA_S-firma_M_contig9701.20698.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9701 545..3281 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9701.20698.1 ID=prot_S-firma_M_contig9701.20698.1|Name=mRNA_S-firma_M_contig9701.20698.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=209bp
AVALHTASHVPRSSSFLPAALLESKGSTWTMTLGNPDDPSQARPSRKVRV
QDSAETVSEMQAQESHSLMVAIEHEGIAQVRAELEVEREMSDTVLTAPSL
AEEHGFRTPLMAAVMRGDLSILTAVLRRFEWRFSKKGRKKCWQVLAGEAC
PQEERDREMRTQLEIQDSQGKNLAMLAALCGNVAILKTIMSEIVHTGATH
VLEESDFEG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf