prot_S-firma_M_contig969.20675.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig969.20675.1
Unique Nameprot_S-firma_M_contig969.20675.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length236
Homology
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BLAST of mRNA_S-firma_M_contig969.20675.1 vs. uniprot
Match: D8LC38_ECTSI (Casc1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC38_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 1.340e-84
Identity = 131/149 (87.92%), Postives = 140/149 (93.96%), Query Frame = 0 
Query:   88 KARLRRAEMLEAMQSSWETYTKCDPRPDAASERELNTFLSQGADEEVPELDQALERCVYGESIAADLLNGTGEALENGDISRVSRNDEFLELLRGLSSDKIDFATAHLISHWDSLSGGDEDFDRTCTTAGGIRFGVWVNVSLKGFRMKT 236
            K RLR AE LEA+QSSWETYTKCDPRPDAASE+ LNTFLSQGADEEVPELDQA+ERCVYGESIAADLLN  G++LENGDISR++RN+EFLELLRGLS DKIDFATAHL+SHWDSLSGGDEDFDRTC TAGGIR GVWVNVSLKGFRMKT
Sbjct:   81 KERLRWAEKLEAVQSSWETYTKCDPRPDAASEKALNTFLSQGADEEVPELDQAMERCVYGESIAADLLNDIGQSLENGDISRMARNEEFLELLRGLSFDKIDFATAHLLSHWDSLSGGDEDFDRTCMTAGGIRVGVWVNVSLKGFRMKT 229
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BLAST of mRNA_S-firma_M_contig969.20675.1 vs. uniprot
Match: A0A6H5J7X6_9PHAE (Casc1_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7X6_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 7.830e-84
Identity = 131/163 (80.37%), Postives = 144/163 (88.34%), Query Frame = 0 
Query:   81 QDQIAETKARLRRAEMLEAMQSSWETYTKCDPRPDAASERELNTFLSQGADEEV-------PELDQALERCVYGESIAADLLNGTGEALENGDISRVSRNDEFLELLRGLSSDKIDFATAHLISHWDSLSGGDEDFDRTCTTAGGIRFGVWVNVSLKGFRMKT 236
            + Q+AETK RLR AE LEA+QSSWETYTKCDPRPD ASE+ LNTFLSQGADEE         EL+QA+ERCVYGESIAADLLN  G++LENGDISR++RN++FLELLRGLS DKIDFATAHL+SHWDSLSGGDEDFDRTC TAGGIRFGVWVNVSLKGFRMKT
Sbjct:    7 EQQMAETKERLRWAEKLEAVQSSWETYTKCDPRPDTASEKALNTFLSQGADEEARANTTESTELEQAMERCVYGESIAADLLNDIGQSLENGDISRMARNEKFLELLRGLSFDKIDFATAHLLSHWDSLSGGDEDFDRTCMTAGGIRFGVWVNVSLKGFRMKT 169
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BLAST of mRNA_S-firma_M_contig969.20675.1 vs. uniprot
Match: F0X0R2_9STRA (Uncharacterized protein AlNc14C513G12006 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X0R2_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 6.660e-5
Identity = 50/172 (29.07%), Postives = 83/172 (48.26%), Query Frame = 0 
Query:   66 RTEELERLANELQGAQDQIAETKARLR-RAEMLEAMQSSWETYTKCDPRPDAASERELNTFLSQGADEEVPELDQALERCVYGESIAADLLNGTGEALENGDISRVSRNDEFLELLRGLSSDKIDFATAHLISHWDSLSGGDEDFDRTCTTAG---GIRFGVWVNVSLKGFR 233
            R  EL RLA E + ++++I   + RL  +   L+A Q  WE Y KC+ RP A  E ++N FL+  + +   +L    E C     +  DL     EAL   +++ V ++  F++ ++     K +F  AHL+   D  +  +   +   T+A     IR G W+N+  K  R
Sbjct:   72 RESELLRLAIEEETSRERIELHQKRLELKLGSLKAAQD-WERYLKCESRPAADIEGDVNAFLNAWSADMSTDLHHVTECCDTSCLVIDDLTFVGMEALAVDNMALVQQSFAFVDHIQRQIHTKFEFVMAHLLQFADEFTQVNSRNEVKVTSASIHHRIRIGFWINLIPKSSR 242
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig969.20675.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LC38_ECTSI1.340e-8487.92Casc1_N domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5J7X6_9PHAE7.830e-8480.37Casc1_N domain-containing protein n=1 Tax=Ectocarp... [more]
F0X0R2_9STRA6.660e-529.07Uncharacterized protein AlNc14C513G12006 n=1 Tax=A... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 15..97
IPR031826Cancer susceptibility candidate 1, N-terminalPFAMPF15927Casc1_Ncoord: 42..231
e-value: 5.1E-37
score: 127.5
IPR023247Cancer susceptibility candidate protein 1PANTHERPTHR20929LUNG ADENOMA SUSCEPTIBILITY 1-RELATEDcoord: 12..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig969contigS-firma_M_contig969:9379..12255 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig969.20675.1mRNA_S-firma_M_contig969.20675.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig969 9379..12255 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig969.20675.1 ID=prot_S-firma_M_contig969.20675.1|Name=mRNA_S-firma_M_contig969.20675.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=236bp
VRASGSKVDEQMGPKKKSKAQKEAERLQAEEEERKAEILRVKREAERVRK
EAEYARRLKEEQVAERTEELERLANELQGAQDQIAETKARLRRAEMLEAM
QSSWETYTKCDPRPDAASERELNTFLSQGADEEVPELDQALERCVYGESI
AADLLNGTGEALENGDISRVSRNDEFLELLRGLSSDKIDFATAHLISHWD
SLSGGDEDFDRTCTTAGGIRFGVWVNVSLKGFRMKT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023247Casc1
IPR031826Casc1_N