prot_S-firma_M_contig967.20660.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig967.20660.1
Unique Name	prot_S-firma_M_contig967.20660.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	262

Homology

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BLAST of mRNA_S-firma_M_contig967.20660.1 vs. uniprot
Match: A0A0K1H341_SCYLO (Phytochrome (Fragment) n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A0K1H341_SCYLO)

HSP 1 Score: 172 bits (435), Expect = 1.250e-45
Identity = 112/241 (46.47%), Postives = 137/241 (56.85%), Query Frame = 0

Query:    1 MSGSLGIASTFAGAAAGDETPVAPGGGGTLFAVVLPLRPAAPLPPAAERAGAVGSVEKRAAVTTAGAAESKAAA--PSSFWGNPP--SRKLTFLVVDDHKLNIKLLQRKIQLTFE--DSDVQVLTAMDGVMAMDTLAFVRECRSGEEDDGDSPPLFLAGMFLDFHMPNMSGVECTKRIRQAEAENGWPRVFISGCTADLTESSRGSFLGAGGDSVLIKPWGPGQVERICHQMLAHALDEEK 235
            MSG L IAST         +     G GTLFA +LPL  AA  P A   A  VG+              SKAA   P +  G+    +RKL FLV DD K+N+KLLQRKI+  F   + DVQVLTA DG++A++    VR    G+E         LAGMF+D  MPN+ GVECTKR+R+ E EN WPRV I GCTAD +E++  +F  AGGD ++ KPW  GQVER C  ML  A   EK
Sbjct:  483 MSGRLWIASTL--------SEEGKHGSGTLFAAMLPLSEAATNPGAHSNAVEVGA--------------SKAAPGWPIAIIGHMSLGARKLAFLVADDLKVNVKLLQRKIEKIFSGVEGDVQVLTASDGLLALEAQTAVRTNTGGDE-------WILAGMFVDLRMPNVDGVECTKRVRELEVENHWPRVLIYGCTADTSENAHKTFADAGGDGIIGKPWQSGQVERACKAMLTAAFQSEK 694

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BLAST of mRNA_S-firma_M_contig967.20660.1 vs. uniprot
Match: A0A6H5KE71_9PHAE (Response regulatory domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE71_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 7.420e-45
Identity = 100/234 (42.74%), Postives = 131/234 (55.98%), Query Frame = 0

Query:    1 MSGSLGIASTFAGAAAGDETPVAPGGGGTLFAVVLPLRPAAPLPPAAERAGAVGSVEKRAAVTTAGAAESKAAAPSSFWGNPPSRKLTFLVVDDHKLNIKLLQRKIQLTFEDSDVQVLTAMDGVMAMDTLAFVRECRSGEEDDGDSPPLFLAGMFLDFHMPNMSGVECTKRIRQAEAENGWPRVFISGCTADLTESSRGSFLGAGGDSVLIKPWGPGQVERICHQMLAHALDEE 234
            MSG LGIAST A      +T       GT+FA  +PL  +                     V  AGA + +  A        P   +TFLVVDD+ +N+KLL+ +I  TF+DS +QV+TA DG  A+     V+    G   D D      AG+F+DFHMPNM+G+ECT+ +R+ EA+NGW R  ISGCTADLTE +   F  AGGD VL KPW  G V+ +CH+M+A AL+ E
Sbjct:    1 MSGGLGIASTSA------QTGDRKDSSGTIFACAIPLLVSP--------------------VKIAGAVQDETVADPGKTTTVP-HAVTFLVVDDNAVNVKLLKHRITKTFDDSKLQVITATDGKTAIQQWEAVK----GLGKDNDH---VFAGVFIDFHMPNMNGMECTECLRRLEAKNGWSRTPISGCTADLTEKATKQFTDAGGDEVLCKPWRAGDVKSMCHRMIAKALEAE 200

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BLAST of mRNA_S-firma_M_contig967.20660.1 vs. uniprot
Match: D7G163_ECTSI (Phytochrome-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G163_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 3.700e-44
Identity = 98/210 (46.67%), Postives = 122/210 (58.10%), Query Frame = 0

Query:   27 GGTLFAVVLPLRPAAPLPPAAERAGAVGSVEKRAAVTTAGAAESKAAAPSSFWGNPPSRKLTFLVVDDHKLNIKLLQRKIQLTFEDS--DVQVLTAMDGVMAMDTLAFVRECRSGEEDDGDSPPLFLAGMFLDFHMPNMSGVECTKRIRQAEAENGWPRVFISGCTADLTESSRGSFLGAGGDSVLIKPWGPGQVERICHQMLAHALDEE 234
            GGTLFAV+LPL                 SVE+  AV  AG+                         DDH +N+KL++ KI+  F  S  DVQVL+A DG+MA+D     R  R G      S  L LAG+F+DFH+PN+ G+ECT+RIR  EA NGWPRV I GCTAD+TE  R SF  AGGD V++KPW PGQVER C+ M+A ALD++
Sbjct:  783 GGTLFAVILPLC----------------SVEEAGAVVDAGSN-----------------------ADDHTVNVKLIEHKIRRHFRGSGADVQVLSATDGLMALDVQTAARHVRVG-----GSGGLVLAGIFMDFHLPNLDGIECTRRIRVLEAANGWPRVTICGCTADVTEGVRSSFQDAGGDEVILKPWRPGQVERACNVMVAKALDDD 948

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BLAST of mRNA_S-firma_M_contig967.20660.1 vs. uniprot
Match: A0A6H5LI29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI29_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 2.120e-42
Identity = 102/238 (42.86%), Postives = 133/238 (55.88%), Query Frame = 0

Query:    1 MSGSLGIASTFAGAAAGDETPVAPGGGGTLFAVVLPLRPAAPLPPAAERAGAVGSVEKRAAVTTAGAAESKAAAPSSFWGNPPSRKLTFLVVDDHKLNIKLLQRKIQLTFEDSDVQVLTAMDGVMAMDTLAFVRECRSGEEDDGDSPPLFLAGMFLDFHMPNMSGVECTKRIRQAEAENGWPRVFISGCTADLTESSRGSFLGAGGDSVLIKPWGPGQVERICHQMLAHALDEEKKDT 238
            MSG LGIAST A      +T       GT+FA  +PL  +                     V  AGA + +  A        P   +TFLVVDDH +N+KLL+ +I  TF+D  +QV+TA DG  A+     V+    G   D D      AG+F+DFHMPNM+G+ECT+ +R+ EA+NGW R  ISGCTADLTE +   F  AGGD VL KPW  G V+ +CH+M+A AL+ EKK +
Sbjct:  777 MSGGLGIASTSA------QTGDRKDSSGTIFACAIPLLVSP--------------------VKIAGAVQDETVADPGTTTTVP-HAVTFLVVDDHAVNVKLLKHRITKTFDDRKLQVITATDGETAIQQWEAVK----GLGKDNDH---VFAGVFIDFHMPNMNGMECTECLRRLEAKNGWSRTPISGCTADLTEKATKQFTDAGGDEVLCKPWRAGDVKSMCHRMIAKALEAEKKSS 980

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BLAST of mRNA_S-firma_M_contig967.20660.1 vs. uniprot
Match: D7FU21_ECTSI (Phytochrome-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU21_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 1.060e-41
Identity = 108/252 (42.86%), Postives = 139/252 (55.16%), Query Frame = 0

Query:    1 MSGSLGIASTFAGAAAGDETPVAPGGGGTLFAVVLPLRPAAPLPPAAERAGA-----------VGSVEKRAAVTTAGAAESKAAAPSSFWGNP--------PSRKLTFLVVDDHKLNIKLLQRKIQLTFEDSD--VQVLTAMDGVMAMDTLAFVRECRSGEEDDGDSPPLFLAGMFLDFHMPNMSGVECTKRIRQAEAENGWPRVFISGCTADLTESSRGSFLGAGGDSVLIKPWGPGQVERICHQMLAHAL 231
            M G LGIASTF+     DE     GG  TLFAV LPL      PP  E  GA           VGS      V T  A       PSS  G          P +K+  LVVDD K+NI L+++KI + F+DS   VQVL A DG  A++  AF    R    ++G +  + LAG+F+D HMPNM G+ECT++IRQ+E E GW  V I G TAD T+++R  F  AGG  ++ KPW PGQVE +C+ M+ ++L
Sbjct:  576 MFGGLGIASTFS-----DEGNQRRGG--TLFAVTLPLL----CPPPEEEEGAEPGTVCTTTSRVGSANDEHLVETTKAMAEITNNPSSVSGGGDNGDKGTGPHKKIALLVVDDQKINITLMEKKIAMVFKDSQTAVQVLLATDGKTAIE--AFQGARRDEPNNNGSAGSVVLAGVFMDLHMPNMDGIECTRKIRQSEVERGWLPVPICGFTADTTQTTRERFQDAGGSDIIYKPWQPGQVEDVCNAMVVNSL 814

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BLAST of mRNA_S-firma_M_contig967.20660.1 vs. uniprot
Match: A0A0K1H350_PETFA (Phytochrome (Fragment) n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A0K1H350_PETFA)

HSP 1 Score: 158 bits (399), Expect = 2.880e-40
Identity = 99/248 (39.92%), Postives = 136/248 (54.84%), Query Frame = 0

Query:    1 MSGSLGIASTFAGAAAGDETPVAPGGGGTLFAVVLPLRPAAPLPPAAERAGAVGSVEKRAAVTTAGAAESKAAAPSSFWGNPPSRKLTFLVVDDHKLNIKLLQRKIQLTFEDS------DVQVLTAMDGVMAMDTLAFVRECRSGEEDDGDSPPLFLAGMFLDFHMPNMSGVECTKRIRQAEAENGWPRVFISGCTADLTESSRGSFLGAGGDSVLIKPWGPGQVERICHQMLAHALDEEKKDTEEAK 242
            MSG +G+AST +G A   ++       GTLFAV LPL                G+      +T      S   A +    +  +RKL FL VDDH +N+KL++RKI + F+ +      DV+V TA DG++A+D L  V+     E DD       L G+FLDFHMPN+ G+ECTKRIR+ E E GW R+FI GC+AD T+ +  +F  AGG  V+ KPW  GQ+E +C  ML  A +  +K +   K
Sbjct:  722 MSGGIGVASTASGEAEQGKSS------GTLFAVFLPL---------------CGTTALSLELTPGTGIASGNNADTLQKAHIAARKLVFLAVDDHPVNLKLIERKIGMFFKRTGGDMKVDVEVRTAADGLLALDALVDVQNIT--ECDDA-----VLVGVFLDFHMPNLDGIECTKRIRKLENEKGWSRIFICGCSADPTQQTSDAFQAAGGSDVIYKPWNSGQIEGMCTTMLITAFESSRKGSAAGK 941

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BLAST of mRNA_S-firma_M_contig967.20660.1 vs. uniprot
Match: D7G6T2_ECTSI (Phytochrome-like protein 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6T2_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 1.410e-33
Identity = 69/143 (48.25%), Postives = 98/143 (68.53%), Query Frame = 0

Query:   96 KLNIKLLQRKIQLTFEDS--DVQVLTAMDGVMAMDTLAFVRECRSGEEDDGDSPPLFLAGMFLDFHMPNMSGVECTKRIRQAEAENGWPRVFISGCTADLTESSRGSFLGAGGDSVLIKPWGPGQVERICHQMLAHALDEEKK 236
            ++N++LL  KI+  F+D+  DV+V++A DG +A++    + E     +  G      LAGMF+DFHMP++ G+ECTKRIR  EA+NGW R+ I GCTAD T++ R  F  AGGD V+ KPW PGQVE IC+ M+A+ L+ E+K
Sbjct:  824 EVNLRLLDHKIRRFFKDNGADVEVMSATDGFIALE----MHEAARRNQSHGS----VLAGMFIDFHMPDLDGIECTKRIRLLEADNGWSRIMICGCTADPTQAIRRVFQNAGGDEVISKPWCPGQVESICNAMVANVLNAEQK 958

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BLAST of mRNA_S-firma_M_contig967.20660.1 vs. uniprot
Match: A0A0K1H3J6_9PHAE (Phytochrome n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A0K1H3J6_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 7.610e-26
Identity = 87/228 (38.16%), Postives = 119/228 (52.19%), Query Frame = 0

Query:    1 MSGSLGIASTFAGAAAGDETPVAPGGGGTLFAVVLPLRPAAPLPPAAERAGAVGSVEKRAAVTTAGAAESKAAAPSSFWGNPPSRKLTFLVVDDHKLNIKLLQRKIQLTFEDSDVQVLTAMDGVMAMDTLAFVRECRSGEEDDGDSPPLFLAGMFLDFHMPNMSGVECTKRIRQAEAENGWPR-VFISGCTADLTESSRGSFLGAGGDSVLIKPWGPGQVERICHQML 227
            M G+ G+AST               G GTLF   +PL P+A     ++ + A    EK          E K+ AP+     P      FLVVDD KLN++L  +KI L   + D+ V+TAMDG +A   L  V++ RS +      PP+ + G+ +D HMP MSGVECT+RIR  EAE G  R V I   TADLT+ +R     AG  + L KP   G++E IC +++
Sbjct:  968 MGGAFGVASTP--------------GSGTLFRCAIPLEPSATQN--SDDSSAEHGREKER--------EDKSEAPTQKRARPT----VFLVVDDSKLNLRLCSKKITLALGE-DITVMTAMDGWLA---LQIVQQMRSSD------PPVHITGIIMDKHMPGMSGVECTRRIRAMEAERGCVRPVPIIAFTADLTDVAREELKQAGSTAFLSKPSAAGELESICRELV 1157

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BLAST of mRNA_S-firma_M_contig967.20660.1 vs. uniprot
Match: B8C3H5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3H5_THAPS)

HSP 1 Score: 75.5 bits (184), Expect = 9.130e-12
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 0

Query:   91 VVDDHKLNIKLLQRKIQLTFEDSDVQVLTAMDGVMAMDTLAFVRECRSGEED--DGDSPPLFLAGMFLDFHMPNMSGVECTKRIRQAEA-ENGWPRVFISGCTADLTESSRGSFLGAGGDSVLIKPWGPGQVERICHQML 227
            VVDD  +N KL  RKI+                         ++EC SG     + +  P  + G+F+D+HM +M G ECT+RIR+ E+     P V+I G TAD+ E S G  + +G +SV+ KP  P  +E    +M+
Sbjct:  942 VVDDSAINRKLCGRKIRRWMPS------------------VTIKECSSGSSALAEYEKSPKDVMGIFMDYHMQDMDGDECTRRIRECESMREDLPNVYIVGYTADVLEDSTGRLMESGMNSVMPKPEPPRAIEEELRKMM 1063

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BLAST of mRNA_S-firma_M_contig967.20660.1 vs. uniprot
Match: UPI001BC52CFB (Response regulator n=1 Tax=Hydrogenophaga sp. TaxID=1904254 RepID=UPI001BC52CFB)

HSP 1 Score: 65.5 bits (158), Expect = 1.800e-8
Identity = 50/158 (31.65%), Postives = 71/158 (44.94%), Query Frame = 0

Query:   73 AAPSSFWGNPPSRKLTFLVVDDHKLNIKLLQRKIQLTFEDSDVQVLTAMDGVMAMDTLAFVRECRSGEEDDGDSPPLFLAGMFLDFHMPNMSGVECTKRIRQAEAENGWPRVFISGCTADLTESSRGSFLGAGGDSVLIKPWGPGQVERICHQMLAHA 230
            A P +   N P    T LV DDH +N K     +++      ++V  A DG  A+D +             G    L L    +D  MPN+ G+E T+RIR  EAE G  R+ +   TAD  + SR     AG D+ L KP  P ++     ++L  A
Sbjct:  458 ALPPARMENGPPLHGTVLVADDHPVNRKF----VEILLAKMGLEVRVAEDGQQALDMVF-----------SGSGIDLVL----MDLQMPNLDGLEATRRIRAWEAEQGRVRLPVVALTADAFDESRLRSREAGMDAFLSKPIVPQRLRETLERLLPTA 596

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig967.20660.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig967.20660.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0K1H341_SCYLO	1.250e-45	46.47	Phytochrome (Fragment) n=1 Tax=Scytosiphon lomenta...	[more]
A0A6H5KE71_9PHAE	7.420e-45	42.74	Response regulatory domain-containing protein n=1 ...	[more]
D7G163_ECTSI	3.700e-44	46.67	Phytochrome-like protein n=2 Tax=Ectocarpus TaxID=...	[more]
A0A6H5LI29_9PHAE	2.120e-42	42.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FU21_ECTSI	1.060e-41	42.86	Phytochrome-like protein 2 n=1 Tax=Ectocarpus sili...	[more]
A0A0K1H350_PETFA	2.880e-40	39.92	Phytochrome (Fragment) n=1 Tax=Petalonia fascia Ta...	[more]
D7G6T2_ECTSI	1.410e-33	48.25	Phytochrome-like protein 3 n=2 Tax=Ectocarpus TaxI...	[more]
A0A0K1H3J6_9PHAE	7.610e-26	38.16	Phytochrome n=1 Tax=Ishige okamurae TaxID=233772 R...	[more]
B8C3H5_THAPS	9.130e-12	33.57	Uncharacterized protein n=1 Tax=Thalassiosira pseu...	[more]
UPI001BC52CFB	1.800e-8	31.65	Response regulator n=1 Tax=Hydrogenophaga sp. TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 87..223 e-value: 5.2E-10 score: 49.3
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 90..219 e-value: 1.8E-10 score: 41.0
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 88..227 score: 22.704
None	No IPR available	GENE3D	3.40.50.2300		coord: 84..232 e-value: 1.7E-20 score: 75.1
None	No IPR available	PANTHER	PTHR43719	FAMILY NOT NAMED	coord: 81..213
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..17
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 18..261
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 86..229

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig967	contig	S-firma_M_contig967:4800..6236 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig967.20660.1	mRNA_S-firma_M_contig967.20660.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig967 2941..6473 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig967.20660.1 ID=prot_S-firma_M_contig967.20660.1|Name=mRNA_S-firma_M_contig967.20660.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=262bp
MSGSLGIASTFAGAAAGDETPVAPGGGGTLFAVVLPLRPAAPLPPAAERA
GAVGSVEKRAAVTTAGAAESKAAAPSSFWGNPPSRKLTFLVVDDHKLNIK
LLQRKIQLTFEDSDVQVLTAMDGVMAMDTLAFVRECRSGEEDDGDSPPLF
LAGMFLDFHMPNMSGVECTKRIRQAEAENGWPRVFISGCTADLTESSRGS
FLGAGGDSVLIKPWGPGQVERICHQMLAHALDEEKKDTEEAKGEGEGEGE
GEAQTVMVEGA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011006	CheY-like_superfamily
IPR001789	Sig_transdc_resp-reg_receiver