prot_S-firma_M_contig9666.20658.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9666.20658.1
Unique Nameprot_S-firma_M_contig9666.20658.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length406
Homology
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BLAST of mRNA_S-firma_M_contig9666.20658.1 vs. uniprot
Match: D8LQ84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ84_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 8.070e-90
Identity = 242/424 (57.08%), Postives = 277/424 (65.33%), Query Frame = 0 
Query:    1 AQAVQRAAKLIKNSRQIDRD-----DSAALRELDRTVDETSKRVLAWAEGAAAAXXAAVPGGEKEGRQRQVFPSALLAGCCRYMEALATAFPARFSAECRSLVRPAASCA---QQLMMSHGTGAAAAVPGGAVADVEAEAAESHHQGAAAERKSLVIEERRAMELWVDMLGICLLPFCGGGGAAKASN--GQTSAAAGS---------AHADDPLDPXXXXXXXXXXXXXXXXXXXXXXXXXXVSGGGKARSVWVTGWMRRTGVSLAEPLECPLDTRPGGRDEELPRRLAVLGASHAKAAAAASRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATGELAGGRDGAADGGHAAVVEEAFSCLVSLSAAAPGGSAQAECVKVALVSLRECVLAARLECLAPRVPALLSMLEGVPSRLKLLLAR 405
            AQAVQ  AK IK+S Q+        D AA R LD T+ ETS+RVLAW E AAAA  AA P        R+VFP  LL  CCRYMEALATA+PARFSA+CRSL RP ASC     +   +H +    AVP     + + E  E+     +   +++ IEER A+ELWV+MLGICLLPFCG GG ++ ++  G   A +G           H DDP D          XXXXXXXXXXXXXX   VSG GKARS WV GWMRR G++LAEPLECP D RPGGRDE++P RLA L + HA+AAA+ASRP    XXXXXXXXXXXXXXXXXXXXXXXXXT +              HA VVEEAFSCL+ LS   P  SAQAECVK ALVSL+EC  +ARL CL  RVPA LSMLEGVPSRLKLLL R
Sbjct:   18 AQAVQSVAKQIKSSSQVHLKGAAGTDEAATRTLDETISETSRRVLAWVECAAAA--AAAP---HSSDGRRVFPPVLLTSCCRYMEALATAYPARFSADCRSLARPVASCVLVMTRTAKAHDSAIGVAVP---CRETKGEGEENDDGFPSRSGRTITIEERNALELWVEMLGICLLPFCGSGGGSRTTSRSGLGEATSGDDDNSRDPSGEHGDDPFD--------SDXXXXXXXXXXXXXXGSRVSGDGKARSRWVAGWMRRAGITLAEPLECPFDVRPGGRDEDMPVRLATLISYHAQAAASASRPASVSXXXXXXXXXXXXXXXXXXXXXXXXXTPSES------------HALVVEEAFSCLLCLSETVPESSAQAECVKAALVSLKECAQSARLRCLEHRVPAALSMLEGVPSRLKLLLTR 413
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9666.20658.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ84_ECTSI8.070e-9057.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9666contigS-firma_M_contig9666:195..3512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9666.20658.1mRNA_S-firma_M_contig9666.20658.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9666 195..3512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9666.20658.1 ID=prot_S-firma_M_contig9666.20658.1|Name=mRNA_S-firma_M_contig9666.20658.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=406bp
AQAVQRAAKLIKNSRQIDRDDSAALRELDRTVDETSKRVLAWAEGAAAAA
AAAVPGGEKEGRQRQVFPSALLAGCCRYMEALATAFPARFSAECRSLVRP
AASCAQQLMMSHGTGAAAAVPGGAVADVEAEAAESHHQGAAAERKSLVIE
ERRAMELWVDMLGICLLPFCGGGGAAKASNGQTSAAAGSAHADDPLDPDS
EDEDEEDADDDDDDNDDDDGNGGGVSGGGKARSVWVTGWMRRTGVSLAEP
LECPLDTRPGGRDEELPRRLAVLGASHAKAAAAASRPASVSSLATALAVL
VAFTASTAGAAAAAGATATGELAGGRDGAADGGHAAVVEEAFSCLVSLSA
AAPGGSAQAECVKVALVSLRECVLAARLECLAPRVPALLSMLEGVPSRLK
LLLAR*
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