prot_S-firma_M_contig9655.20651.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9655.20651.1
Unique Nameprot_S-firma_M_contig9655.20651.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length258
Homology
BLAST of mRNA_S-firma_M_contig9655.20651.1 vs. uniprot
Match: D8LGP1_ECTSI (MutS protein homolog 1B MutS-like ATPases involved in mismatch repair, family 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP1_ECTSI)

HSP 1 Score: 414 bits (1063), Expect = 6.030e-136
Identity = 223/259 (86.10%), Postives = 230/259 (88.80%), Query Frame = 0
Query:    1 MSPTGTAAPLPRPPMIK-AEVVGGARKEASVTGGDVDLFARTWESLDFGVVLERLSAECRTEMGRVRALVPDFKTTLEEVHELYERVSEVLLLAGDAVPLRSGMSVERQLAIAADGSTLEPGEIAAVASALEGLFELREFFCGAAADAKSTGGMVGRSGKTPRLAAVAAEITLDEGLLGLLRGAFDSQGELSADRFPEIGRLRSKVDSLRQGIRSTMNKLMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTYKRTVG 258
            MSP G A  L RPPM    E  G A K     GGDVDLFARTWESLDFGVVLERLS ECRTEMGR RAL+PDFKTTLEEVHELYERV+EVLLLAGDAVPLR+GM+VE QLAIAA GSTLEP EIAAVASALEGLFELREFFCGA ADAKS GGMV RSGKTPRLAAVAAEI LDEGLLGLLRGAFDSQGELSA RFPEIGRLRSK DSLRQGI+STM++LMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTYKRTVG
Sbjct:    1 MSPIGAATTLLRPPMADDREAAGAAAKGKPAVGGDVDLFARTWESLDFGVVLERLSRECRTEMGRSRALIPDFKTTLEEVHELYERVNEVLLLAGDAVPLRAGMAVEPQLAIAAAGSTLEPTEIAAVASALEGLFELREFFCGAVADAKSPGGMVDRSGKTPRLAAVAAEIKLDEGLLGLLRGAFDSQGELSAQRFPEIGRLRSKADSLRQGIKSTMSRLMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTYKRTVG 259          
BLAST of mRNA_S-firma_M_contig9655.20651.1 vs. uniprot
Match: A0A6H5JAB7_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAB7_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 5.230e-135
Identity = 220/259 (84.94%), Postives = 227/259 (87.64%), Query Frame = 0
Query:    1 MSPTGTAAPLPRPPMIK-AEVVGGARKEASVTGGDVDLFARTWESLDFGVVLERLSAECRTEMGRVRALVPDFKTTLEEVHELYERVSEVLLLAGDAVPLRSGMSVERQLAIAADGSTLEPGEIAAVASALEGLFELREFFCGAAADAKSTGGMVGRSGKTPRLAAVAAEITLDEGLLGLLRGAFDSQGELSADRFPEIGRLRSKVDSLRQGIRSTMNKLMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTYKRTVG 258
            MSP G A  L RPPM +  E  G A       GGDVDLFARTWESLDFGVVLERLS ECRTEMGR RAL+PDFKTTLEEVHELYERV+EVLLLAGDAVPLR+GM+VE QLAIAA GSTLE  EIAAVASALEGLFELREFFCGA ADAK  GGMV RSGKTPRLAAVAAEI LDEGLLGLLRGAFDSQGELSA RFPEIGRLRSK DSLRQGI+STM +LMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTYKRTVG
Sbjct:  118 MSPMGAATTLLRPPMAEDREAAGAAATGKPAVGGDVDLFARTWESLDFGVVLERLSRECRTEMGRSRALIPDFKTTLEEVHELYERVNEVLLLAGDAVPLRAGMAVEPQLAIAAAGSTLEATEIAAVASALEGLFELREFFCGAMADAKGAGGMVDRSGKTPRLAAVAAEIKLDEGLLGLLRGAFDSQGELSAQRFPEIGRLRSKADSLRQGIKSTMTRLMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTYKRTVG 376          
BLAST of mRNA_S-firma_M_contig9655.20651.1 vs. uniprot
Match: A0A835YZI9_9STRA (Muts protein-like protein 1B muts-like ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZI9_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.040e-58
Identity = 127/251 (50.60%), Postives = 151/251 (60.16%), Query Frame = 0
Query:    9 PLPRPPMIKAEVVGGARKEASVTGGDVDLFARTWESLDFGVVLERLSAECRTEMGRVRALVPDFKTTLEEVHELYERVSEVLLLAGDAVPLRSGMSVERQLAIAADGSTLEPGEIAAVASALEGLFELREFFCGAAADAKSTG----GMVGRSGKTPRLAAVAAEITLDEGLLGLLRGAFDSQGELSADRFPEIGRLRSKVDSLRQGIRSTMNKLMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTYKR 255
            PL   P  K        KE    G  VDLFARTWESLDFGVVLE LS EC T MGR  AL  DFK  +E V  LY  V EV  L  + VP+ SGM +E  +A+AA G+TLEP E+  V+  L  L  L+ FF     DA   G    G  G    TP L  +   I LD  L+ LL  AFD+ GEL   +FPE+GRLR+++D L   IR ++ KL++ G FSGMLADEGR AYVSE+ GRFV+PV PTYKR
Sbjct:    5 PLTYKPPTKQPAEAEPAKEPPADG--VDLFARTWESLDFGVVLEHLSKECWTAMGRKAALKADFKADVESVQALYRGVEEVYSLT-EPVPIASGMDIEAIIALAAKGTTLEPPELREVSDCLTSLSNLKRFFNPEEGDAPVRGVTVSGGAGARYPTPTLQGLTRPIYLDPELVELLHEAFDATGELCGKKFPELGRLRARIDKLYDSIRQSVQKLLSSGTFSGMLADEGRGAYVSEVNGRFVLPVKPTYKR 252          
BLAST of mRNA_S-firma_M_contig9655.20651.1 vs. uniprot
Match: A0A7S3Y253_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y253_HETAK)

HSP 1 Score: 164 bits (416), Expect = 2.440e-45
Identity = 102/224 (45.54%), Postives = 133/224 (59.38%), Query Frame = 0
Query:   35 VDLFARTWESLDFGVVLERLSAECRTEMGRVRALVPDFKTTLEEVHELYERVSEVLLLAGDAVPLRSGMSVERQLAIAADGSTLEPGEIAAVASALEGLFELREFFCGAAADAKSTGGMVGRSGKTPRLAAVAAEITLDEGLLGLLRGAFDSQGELSADRFPEIGRLRSKVDSLRQGIRSTMNKLMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTYKRTVG 258
            VDL ARTW+SLDF V+L+ L+  C+T MG+ +A  P F  +  E    Y  V EV     D VPLRSGM VE QLA+AA G+ LE  E+  VA+ALEGL  LR++  G+          +      P L A+  +I   E L+ LL GAFD +GELS  +FP +G LR  +   +Q IRS M+ L+A  EF+ MLAD      V E+ GR+V+ V PTYKR+VG
Sbjct:   94 VDLEARTWQSLDFQVLLDGLAKYCQTAMGQRKARAPHFAGSAAEARARYTAVREVWDCV-DPVPLRSGMDVEAQLALAAQGTVLEVPELREVAAALEGLAALRKWLDGS----------INEKASIPTLKALGEDIRPSEQLVALLDGAFDEEGELSGKKFPRLGALREGILRKKQQIRSMMSSLLASAEFTAMLADP----QVQELEGRYVVAVKPTYKRSVG 302          
BLAST of mRNA_S-firma_M_contig9655.20651.1 vs. uniprot
Match: A0A0G4ECS6_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ECS6_VITBC)

HSP 1 Score: 79.7 bits (195), Expect = 2.880e-13
Identity = 66/236 (27.97%), Postives = 113/236 (47.88%), Query Frame = 0
Query:   35 VDLFARTWESLDFGVVLERLSAECRTEMGRVRALVPDFKTTLEEVHELYERVSEVLLLAGDAVPLRSGMSVERQLAIAADG---STLEPGEIAAVASALEGLFELREFFCGA------AADAKSTGGMVGRSGKTPRLAAVAAEITLDEGLLGLLRGAFDSQGE---LSADRFPEIGRLRSKVDSLRQGIRSTMNKLMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTYKRTVG 258
            +DLF RTW+SLD+ VV+  L+    T  GR  A    F  + +E   LYE+V +V  L+ + +P  + + +E  + ++ +G   S+    ++  + +AL+ +  L+ +   A      AA  +S  G+         L  +   + LD  L  L  GAF+   +   LS +RFPE+ RLR  +  L   +++ + ++    E    LAD     +     GRFVI V   Y++ +G
Sbjct:   57 LDLFERTWQSLDWRVVMASLAEAASTSPGRRLARSASFAGSHDECLVLYEQVGDVRRLS-EQLPFATSLDIEHLVNVSDEGRARSSFSLPDLYRIGTALDDVTHLKGWLSAAHDRLVAAAKRESDRGI-------GSLLELMEPVQLDSELTDLFNGAFEGSEDSPVLSGNRFPELRRLRESIARLEMSLQARIEQIARRPELQPKLADGSGGKWSRTDTGRFVIAVQRRYRKGLG 284          
BLAST of mRNA_S-firma_M_contig9655.20651.1 vs. uniprot
Match: A0A7S1YWC1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YWC1_TRICV)

HSP 1 Score: 72.0 bits (175), Expect = 6.880e-11
Identity = 42/98 (42.86%), Postives = 57/98 (58.16%), Query Frame = 0
Query:  161 PRLAAVAAEITLDEGLLGLLRGAFDSQGELSADRFPEIGRLRSKVDSLRQGIRSTMNKLMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTYKRTVG 258
            PRLA+    I +D  LL LL  AFD  G LS D FPE+GRLRSKV +L++ + + +  L+A    S  L+ E      SE+ GR V+PV  +   +VG
Sbjct:   39 PRLASF---IEVDPDLLELLEDAFDDDGRLSGDAFPEVGRLRSKVRTLKRDVLARLETLLAAPSLSSKLSLESGGPMYSEVNGRIVVPVDSSKGNSVG 133          
BLAST of mRNA_S-firma_M_contig9655.20651.1 vs. uniprot
Match: K0RMS7_THAOC (Smr domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RMS7_THAOC)

HSP 1 Score: 72.8 bits (177), Expect = 6.970e-11
Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 0
Query:  162 RLAAVAAEITLDEGLLGLLRGAFDSQGELSADRFPEIGRLRSKVDSLRQGIRSTMNKLMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTY 253
            +L ++  +I +DE L+ LL  AFD +G+LS   FP IGRLRSK+ +L++GI S++  ++A       LA E   + +SEI GR VIPV   Y
Sbjct:  461 QLPSLVKQIHMDEELIELLATAFDEEGKLSGTTFPSIGRLRSKIRTLKRGILSSIESILALPSMRNKLAVESGGSLMSEINGRIVIPVQQQY 552          
BLAST of mRNA_S-firma_M_contig9655.20651.1 vs. uniprot
Match: A0A357EHG3_9BACT (Endonuclease MutS2 n=3 Tax=Nitrospira sp. TaxID=70125 RepID=A0A357EHG3_9BACT)

HSP 1 Score: 67.4 bits (163), Expect = 4.240e-9
Identity = 58/218 (26.61%), Postives = 100/218 (45.87%), Query Frame = 0
Query:   37 LFARTWESLDFGVVLERLSAECRTEMGRVRALVPDFKTTLEEVHELYERVSEVL--LLAGDAVPLRSGMSVERQLAIAADGSTLEPGEIAAVASALEGLFELREFFCGAAADAKSTGGMVGRSGKTPRLAAVAAEITLDEGLLGLLR---GAFDSQGELSADRFPEIGRLRSKVDSLRQGIRSTMNKLMAGGEFSGMLADEGREAYVSEIAGRFVIPV 249
            LF +  ++L++  VLE LS + ++ +GR R       + L + H   E  SE++  L   + VP      +   +  A+ G  LE GE+   A  L  + EL  +       A+S        G+T RLA V   +   + L G+LR    A    G +     PE+ RL      L+Q +R  +++++    +  +L    +E+Y ++  GR+V+PV
Sbjct:   38 LFDQATQALEWPRVLEFLSLQAQSAIGRARCQSLSLASELTDAHHRQEETSEMVAWLEGSNPVPALGFPDIREPVNRASKGGVLEAGELRDCAIVLAMIAELERY-------AES------HKGETQRLAQVLEPLRATKALQGVLRVIEAAIQPDGAMKETASPELRRLTHHAQGLKQEMRGHLDRILQSRRYEEVL----QESYFAQREGRYVVPV 238          
BLAST of mRNA_S-firma_M_contig9655.20651.1 vs. uniprot
Match: A0A7S1BBM6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BBM6_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 6.210e-8
Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = 0
Query:  161 PRLAAVAAEITLDEGLLGLLRGAFDSQ--GELSADRFPEIGRLRSKVDSLRQGIRSTMNKLMAGGEFSGMLA--DEGREAYVSEIAGRFVIPVTPTYKRTVG 258
            P L  +   + + E L  LL  AFD    G+L   RFP +  LR K+ SLR+ +   +  L+    FS ML+    G  A  SE+ GRFV+P++PT+K  VG
Sbjct:  144 PLLEDLVEPLYIPEELTELLTTAFDKDDPGQLCGKRFPTLKTLRDKISSLRRSVLQQLQSLLKTPSFSSMLSLPPGGAAAGYSEVDGRFVVPLSPTFKNRVG 245          
BLAST of mRNA_S-firma_M_contig9655.20651.1 vs. uniprot
Match: A0A3B9JE14_9CHLR (Endonuclease MutS2 (Fragment) n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A3B9JE14_9CHLR)

HSP 1 Score: 60.8 bits (146), Expect = 6.400e-7
Identity = 55/217 (25.35%), Postives = 98/217 (45.16%), Query Frame = 0
Query:   40 RTWESLDFGVVLERLSAECRTEMGRVRALVPDFKTTLEEVHELYERVSEV--LLLAGDAVPLRSGMSVERQLAIAADGSTLEPGEIAAVASALEGLFELREFFCGAAADAKSTGGMVGRSGKTPRLAAVAAEITLDEGLLGLLRGAFDSQGELSADRFPEIGRLRSKVDSLRQGIRSTMNKLMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTYK 254
            +T   L++  VLERL+A+C     +  AL     T+L E+ +  + VSE   LL+  DA  +     +  ++ +A  G  LEP +I  + + L    EL++     AAD              PRLA ++  +    GL+  +      +G++     P++  LR ++      + S + K ++      ML D    A +++  GR+VIP+   +K
Sbjct:    4 KTLHVLEYPKVLERLAAQCGFSASKELALGLQPSTSLLEIRQRQQEVSEARTLLVTSDAT-IGGAHDIRPKVQLALRGGVLEPIDILDIKTTLISARELKKQLEKRAAD-------------FPRLADISTALPTPSGLVDAISRTVSDRGDVLDGASPKLASLRGEIRVAHDRLMSRLQKYISDPSTVSMLQD----ALITQRDGRYVIPLRSEFK 202          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9655.20651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LGP1_ECTSI6.030e-13686.10MutS protein homolog 1B MutS-like ATPases involved... [more]
A0A6H5JAB7_9PHAE5.230e-13584.94DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A835YZI9_9STRA1.040e-5850.60Muts protein-like protein 1B muts-like ATPase n=1 ... [more]
A0A7S3Y253_HETAK2.440e-4545.54Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A0G4ECS6_VITBC2.880e-1327.97Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S1YWC1_TRICV6.880e-1142.86Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
K0RMS7_THAOC6.970e-1143.48Smr domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A357EHG3_9BACT4.240e-926.61Endonuclease MutS2 n=3 Tax=Nitrospira sp. TaxID=70... [more]
A0A7S1BBM6_9STRA6.210e-838.24Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A3B9JE14_9CHLR6.400e-725.35Endonuclease MutS2 (Fragment) n=1 Tax=Anaerolineae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9655contigS-firma_M_contig9655:1161..3855 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9655.20651.1mRNA_S-firma_M_contig9655.20651.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9655 1161..3855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9655.20651.1 ID=prot_S-firma_M_contig9655.20651.1|Name=mRNA_S-firma_M_contig9655.20651.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=258bp
MSPTGTAAPLPRPPMIKAEVVGGARKEASVTGGDVDLFARTWESLDFGVV
LERLSAECRTEMGRVRALVPDFKTTLEEVHELYERVSEVLLLAGDAVPLR
SGMSVERQLAIAADGSTLEPGEIAAVASALEGLFELREFFCGAAADAKST
GGMVGRSGKTPRLAAVAAEITLDEGLLGLLRGAFDSQGELSADRFPEIGR
LRSKVDSLRQGIRSTMNKLMAGGEFSGMLADEGREAYVSEIAGRFVIPVT
PTYKRTVG
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