prot_S-firma_M_contig9651.20649.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9651.20649.1
Unique Nameprot_S-firma_M_contig9651.20649.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length85
Homology
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BLAST of mRNA_S-firma_M_contig9651.20649.1 vs. uniprot
Match: A0A6H5JDN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN1_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 3.360e-16
Identity = 49/72 (68.06%), Postives = 57/72 (79.17%), Query Frame = 0 
Query:   13 GSLVVVSAAAMDVLRELEHMHAASWEREQRERSLVARLENEGRALQEAEGARRDAESAARAAAAEAEQLAVK 84
            G LV VSAAAMDVLRELE MHAA+WEREQ ER+L+ARLE++   L+ A+ AR   E AARAA AEAE+L VK
Sbjct: 1093 GDLVSVSAAAMDVLRELERMHAAAWEREQAERTLLARLEDQADGLRNADEAREAHEGAARAAVAEAERLVVK 1164
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BLAST of mRNA_S-firma_M_contig9651.20649.1 vs. uniprot
Match: D7G6Q5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q5_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 8.730e-16
Identity = 53/83 (63.86%), Postives = 63/83 (75.90%), Query Frame = 0 
Query:    3 GGGEGGEDGDGSLVVVSAAAMDVLRELEHMHAASWEREQRERSLVARLENEGRALQEAEGARRDAESAARAAAAEAEQLAVKV 85
            GG E GE G   LV VSAAAMDVLRELE MHAA+WEREQ ER+L+ARLE++   L+ A+ AR   E AARAA AEA++L VK+
Sbjct: 1444 GGWEAGERGR-DLVAVSAAAMDVLRELERMHAAAWEREQAERTLLARLEDQADGLRIADEARETHEGAARAAVAEADRLMVKI 1525
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9651.20649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JDN1_9PHAE3.360e-1668.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6Q5_ECTSI8.730e-1663.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 50..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9651contigS-firma_M_contig9651:398..1682 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9651.20649.1mRNA_S-firma_M_contig9651.20649.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9651 398..1682 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9651.20649.1 ID=prot_S-firma_M_contig9651.20649.1|Name=mRNA_S-firma_M_contig9651.20649.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=85bp
GGGGGEGGEDGDGSLVVVSAAAMDVLRELEHMHAASWEREQRERSLVARL
ENEGRALQEAEGARRDAESAARAAAAEAEQLAVKV
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