prot_S-firma_M_contig965.20646.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig965.20646.1
Unique Nameprot_S-firma_M_contig965.20646.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length1019
Homology
BLAST of mRNA_S-firma_M_contig965.20646.1 vs. uniprot
Match: A0A6H5JBA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA9_9PHAE)

HSP 1 Score: 404 bits (1038), Expect = 1.840e-120
Identity = 426/1121 (38.00%), Postives = 518/1121 (46.21%), Query Frame = 0
Query:   10 DESNIFTTTSLSQKSPRGRQXXXXXXPEHQQRYPSWQRGPLLLNEAGAGDRRRDHQQQHRHSPPLFVNLAPIMPGLLTCREDNMSKLAIYSSDDDSDLDDADKDELNGATGRHEDQPSTGRTEAVSEFSNLAGMSATAAASSVFPLKRGAMAGDAVGGRT-LELVPSYSTTVYAGWSKFCLATSDGEQXXXXXXXXXXXXXXXXDGGDNESPDSCTYSITS--EDD--LKSDETDPPPLGARDDFGS--------------TAEIEFTPQETQAILRVVDRLNCGATALAKIAAFSLEDWLGDVCGPIIRDLNGSESYRSTGLNAQHRFGRHESIPPLKRFINARLSPASPALLRDALPARVRRRAFLNTAATMRGTLEDPFSKVLAN------DGKGGXXXXXXSAPSLGDHNRNNFSSVVARRLIEHGQAHYNVIAGSGH-----------------------PSCAPPAYNAPRERPLND---------DSXXXXXXXXXXXVS--PATSAY--------------------RRKRSQPR--CPLRVDLDAVRPARADRKSFGGERGGXXXXXXXDGVCGGANGDGSSVGIKFSRRNMSCFDCDGAGYRSDEDDEDYYAGDSAAGSPRSEPPATAMSALPLFR-SAGVLDVVGLEPPPADRKSERPSYAERPSTKVAVALATDNSNARR-SKGALGSEGERSGSGGTV-----GRADGRRRGDGHKNSMVEAPASAMAAVXXXXXXXXXXXXXXXXXXXXXXTAKTGTVSLGASP--PVPRPVAVMERRTG-LAVLSPP------------SSPEASRVSLAXXXXXXXXXXXAALPKAKVAXXXXXXXAVVVPRTTQPEIGRKNDTGAAKERKYAGDV---GSRRSGAVMMAADRKQKHPGDAYGRGHGSSMMDMLARARESKPEYTPESDETTM-SVGDGRRGVQKYGNHYTDTDDADAAADRRGKSYK-----TDHPDVPTKPSEQGEIQGGARGARKGSNEGQQLGSKRAFFGDAARGALPGNGGDEGRTANVRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQAAERGRLLYEHVTRLGGVARPKMSPVRPMHQRRPRVVYESLW 1018
            DE+++    S  Q+SP   +       E + R+PS Q GPLLLN   A      H+ +H    PL  +L  +MPGLLTCR+DNMSKLA +S DD  D   A         G   +QPSTGRT AVSEFSNLAG  A  AA+ VFP ++ A  GD   GR+ L LVPSYS+  YAGWSKFCLA+SD E                    D    DS TYSITS  EDD  + SDETDPP  G +D F                 ++I FT QETQAILRV++RL CGAT LA+ A+F+LEDW+ +VC PII+DL GS+SYR++GL+A+HRFGR ES+PPLKR+I+A L PAS ALLRDALPARVRRRAF+NTAA MRG  EDPF  VL N      +G GG          +GD  RNNF+SVVARRL EHG+AH N   G+                         P+ A     A  +  +           DS           V+  P  SA                     R +RS+PR    LRVDLDAVR AR   K                   GG  G+  S   +                          AGDS + SPRS  P +     PL R + G  DV G        +       +RPST VA+AL TD    R  +K    + G  S  GG+V       A  RR   G     VEA A+ +AA                       TA  G V + A+   P PRP A + R+ G +A LSPP            +  E S     XXXXXXXXXXX         XXXXXX  V +PR   P                 GDV   G++ +     AA  ++++     G   G +   +   A ESKPEYTPESDE T  S G+G R            D      DRR   YK          V   P  +G      RG  + S E Q   SKR FF  +          D+G  +    GXXXXXXX                              AERGRLLYE V R+GG A+PKMSP+RP+ +RRPRVVYESLW
Sbjct:   27 DENDLIAAPSPQQRSPSTPEEKQA---EKKHRHPSGQCGPLLLNHTAAAA--AGHRCRHSSLLPL-ADLDQLMPGLLTCRDDNMSKLATHSDDDSGDQ--ALGHGHGSPAGDKNEQPSTGRTVAVSEFSNLAGTGA--AATVVFPPRKPAAGGDGRAGRSSLGLVPSYSSVEYAGWSKFCLASSDTENEGGSSDSFEQAKE------DESEDDSRTYSITSGEEDDGHVNSDETDPPLRGEQDFFDGGGXXXXXPSSGKSFDSDIHFTVQETQAILRVMERLGCGATTLARFASFTLEDWMDEVCDPIIQDLRGSQSYRASGLDARHRFGREESVPPLKRYISAELYPASTALLRDALPARVRRRAFVNTAAAMRGEAEDPFCSVLGNNERLAVEGVGGGF-----GKGIGDDTRNNFASVVARRLAEHGRAHNNAATGTSRTDVAATSALVGGDRGGPGRSRRGPAAATGGRGAAADVAVRGASHAVSIYRDSSDSESDGGVMEVTAPPGASAIADTASAXXXXXXXXXXXXXGRGERSEPRRSLALRVDLDAVRAARKVPKHAI--------------WTGGGEGNTPSGFEEXXXXXXXXXXXXXXXXXXXXXXXXXXAGDSDSCSPRSSSPPSMFR--PLSRPTGGAPDVAGFA------RLREHHTRQRPSTTVALALNTDTKGQRHPAKSFKAAAGRGSAVGGSVVGYGWQGASPRRGAPGSARPAVEAAAAVVAA-----------EAKKIAEPERATTASRGRVRVTATRRIPAPRPAARLARKHGVMAGLSPPPPSQAGSMPTPAAKSETSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAMPREFSP-----------------GDVCGSGTKAAEPSAAAAAGEKRYADACCGTEAGFTTAAVAESATESKPEYTPESDEATATSSGEGSREQDLQAGTLRSGD-----LDRRHACYKHGAAVLGKDGVGPGPQRKG------RGDERRSGEQQATRSKRVFFASSXXXXXXXXXXDKGTGSLYHQGXXXXXXXEFDRHSTRPAVVPAPAPAEPMNVPAA---GAERGRLLYEQVIRMGGAAQPKMSPLRPLPKRRPRVVYESLW 1062          
BLAST of mRNA_S-firma_M_contig965.20646.1 vs. uniprot
Match: D7FQW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW5_ECTSI)

HSP 1 Score: 359 bits (922), Expect = 7.870e-110
Identity = 234/454 (51.54%), Postives = 276/454 (60.79%), Query Frame = 0
Query:    1 MKVAVVDNADESN---IFTTTSLSQKSPRGRQXXXXXXPEHQQRYPSWQRGPLLLNEAGAGDRRRDHQQQHRHSPPLFVNLAPIMPGLLTCREDNMSKLAIYSSDDDSDLDDADKDELNGATGRHEDQPSTGRTEAVSEFSNLAGMSATAAASSVFPLKRGAMAGDAVGGRTLELVPSYSTTVYAGWSKFCLATSDGEQXXXXXXXXXXXXXXXXDGGDNESPDSCTYSITS----EDDLKSDETDPPPLGARDDFG----------------STAEIEFTPQETQAILRVVDRLNCGATALAKIAAFSLEDWLGDVCGPIIRDLNGSESYRSTGLNAQHRFGRHESIPPLKRFINARLSPASPALLRDALPARVRRRAFLNTAATMRGTLEDPFSKVLANDGKGGXXXXXXSA-PSLGDHNRNNFSSVVARRLIEHGQAHYNVIAGSGHPSCA 430
            MKVA  D+        +    S  Q+SP   +       E + R+PS Q GPLLLN                  PP   +L P+MPGLLTCR+DNMSKLA YS DDDSD D A  D      G   +QPSTGRT AVSEFSNLAG SA  AA+ VFP ++ A  GD   GR+L LVPSYS+  YAGWSKFCLA+SD E                    D    DS TYSITS    E  + SDETDPP  G +D F                 S ++I FT QETQAILRV++RL CGAT LA+ A+F+LEDW+ +VC PII+DL GS+SYR++GL+A+HRFGR ESIPPLKR+I+A L PAS ALLRDALPARVRRRAF+NTAA MRG  EDPF  VL N+G+             +GD  RNNF+SVVARRL EHG+AHYNV  G+     A
Sbjct:    1 MKVAGEDSEXXXXXXXLIAAPSPQQRSPSAPEEKQA---EKKLRHPSGQCGPLLLNHTXXXXXXXXXXXXXXLLPP--ADLDPLMPGLLTCRDDNMSKLATYS-DDDSD-DQALGDGRGKPAGDTNEQPSTGRTVAVSEFSNLAGTSA--AATVVFPPRKPAADGDGRAGRSLGLVPSYSSVEYAGWSKFCLASSDTENEGGSSGSFEQAKE------DESEDDSRTYSITSGEEDEGHVNSDETDPPLRGEQDGFDGGXXXXXXXXXXXXXXSDSDIHFTVQETQAILRVMERLGCGATTLARFASFTLEDWMDEVCDPIIQDLRGSQSYRASGLDARHRFGREESIPPLKRYISAELYPASTALLRDALPARVRRRAFVNTAAAMRGEAEDPFCSVLGNNGRLAIEGVGGGVGKGIGDDTRNNFASVVARRLAEHGRAHYNVADGASRTGVA 439          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig965.20646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBA9_9PHAE1.840e-12038.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQW5_ECTSI7.870e-11051.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig965contigS-firma_M_contig965:2809..9087 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig965.20646.1mRNA_S-firma_M_contig965.20646.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig965 2809..9102 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig965.20646.1 ID=prot_S-firma_M_contig965.20646.1|Name=mRNA_S-firma_M_contig965.20646.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=1019bp
MKVAVVDNADESNIFTTTSLSQKSPRGRQQQQQQQPEHQQRYPSWQRGPL
LLNEAGAGDRRRDHQQQHRHSPPLFVNLAPIMPGLLTCREDNMSKLAIYS
SDDDSDLDDADKDELNGATGRHEDQPSTGRTEAVSEFSNLAGMSATAAAS
SVFPLKRGAMAGDAVGGRTLELVPSYSTTVYAGWSKFCLATSDGEQEEDD
DDDSDSFQRRKEDGGDNESPDSCTYSITSEDDLKSDETDPPPLGARDDFG
STAEIEFTPQETQAILRVVDRLNCGATALAKIAAFSLEDWLGDVCGPIIR
DLNGSESYRSTGLNAQHRFGRHESIPPLKRFINARLSPASPALLRDALPA
RVRRRAFLNTAATMRGTLEDPFSKVLANDGKGGGGGGSGSAPSLGDHNRN
NFSSVVARRLIEHGQAHYNVIAGSGHPSCAPPAYNAPRERPLNDDSDTDT
DTESASAVSPATSAYRRKRSQPRCPLRVDLDAVRPARADRKSFGGERGGG
GGGGGGDGVCGGANGDGSSVGIKFSRRNMSCFDCDGAGYRSDEDDEDYYA
GDSAAGSPRSEPPATAMSALPLFRSAGVLDVVGLEPPPADRKSERPSYAE
RPSTKVAVALATDNSNARRSKGALGSEGERSGSGGTVGRADGRRRGDGHK
NSMVEAPASAMAAVEAATKAVAAATTTSSKGSRAMTTAKTGTVSLGASPP
VPRPVAVMERRTGLAVLSPPSSPEASRVSLASAASAAATEASAALPKAKV
AAAAASAAAVVVPRTTQPEIGRKNDTGAAKERKYAGDVGSRRSGAVMMAA
DRKQKHPGDAYGRGHGSSMMDMLARARESKPEYTPESDETTMSVGDGRRG
VQKYGNHYTDTDDADAAADRRGKSYKTDHPDVPTKPSEQGEIQGGARGAR
KGSNEGQQLGSKRAFFGDAARGALPGNGGDEGRTANVRGGGGRRGGGRRG
GDAAPSASAAAAAAAAAAAAAAAREQAAERGRLLYEHVTRLGGVARPKMS
PVRPMHQRRPRVVYESLW*
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