mRNA_S-firma_M_contig965.20646.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig965.20646.1
Unique NamemRNA_S-firma_M_contig965.20646.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
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BLAST of mRNA_S-firma_M_contig965.20646.1 vs. uniprot
Match: A0A6H5JBA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA9_9PHAE)

HSP 1 Score: 409 bits (1051), Expect = 2.830e-122
Identity = 434/1138 (38.14%), Postives = 527/1138 (46.31%), Query Frame = 1 
Query:    1 SHAFLMKVAVVDNA---DESNIFTTTSLSQKSPRGRQXXXXXXPEHQQRYPSWQRGPLLLNEAGAGDRRRDHQQQHRHSPPLFVNLAPIMPGLLTCREDNMSKLAIYSSDDDSDLDDADKDELNGATGRHEDQPSTGRTEAVSEFSNLAGMSATAAASSVFPLKRGAMAGDAVGGRT-LELVPSYSTTVYAGWSKFCLATSDGEQXXXXXXXXXXXXXXXXDGGDNESPDSCTYSITS--EDD--LKSDETDPPPLGARDDFGS--------------TAEIEFTPQETQAILRVVDRLNCGATALAKIAAFSLEDWLGDVCGPIIRDLNGSESYRSTGLNAQHRFGRHESIPPLKRFINARLSPASPALLRDALPARVRRRAFLNTAATMRGTLEDPFSKVLAN------DGKGGXXXXXXSAPSLGDHNRNNFSSVVARRLIEHGQAHYNVIAGSGH-----------------------PSCAPPAYNAPRERPLND---------DSXXXXXXXXXXXVS--PATSAY--------------------RRKRSQPR--CPLRVDLDAVRPARADRKSFGGERGGXXXXXXXDGVCGGANGDGSSVGIKFSRRNMSCFDCDGAGYRSDEDDEDYYAGDSAAGSPRSEPPATAMSALPLFR-SAGVLDVVGLEPPPADRKSERPSYAERPSTKVAVALATDNSNARR-SKGALGSEGERSGSGGTV-----GRADGRRRGDGHKNSMVEAPASAMAAVXXXXXXXXXXXXXXXXXXXXXXTAKTGTVSLGASP--PVPRPVAVMERRTG-LAVLSPP------------SSPEASRVSLAXXXXXXXXXXXAALPKAKVAXXXXXXXAVVVPRTTQPEIGRKNDTGAAKERKYAGDV---GSRRSGAVMMAADRKQKHPGDAYGRGHGSSMMDMLARARESKPEYTPESDETTM-SVGDGRRGVQKYGNHYTDTDDADAAADRRGKSYK-----TDHPDVPTKPSEQGEIQGGARGARKGSNEGQQLGSKRAFFGDAARGALPGNGGDEGRTANVRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQAAERGRLLYEHVTRLGGVARPKMSPVRPMHQRRPRVVYESLW 3069
            S AFLM VA  D+    DE+++    S  Q+SP   +       E + R+PS Q GPLLLN   A      H+ +H    PL  +L  +MPGLLTCR+DNMSKLA +S DD  D   A         G   +QPSTGRT AVSEFSNLAG  A  AA+ VFP ++ A  GD   GR+ L LVPSYS+  YAGWSKFCLA+SD E                    D    DS TYSITS  EDD  + SDETDPP  G +D F                 ++I FT QETQAILRV++RL CGAT LA+ A+F+LEDW+ +VC PII+DL GS+SYR++GL+A+HRFGR ES+PPLKR+I+A L PAS ALLRDALPARVRRRAF+NTAA MRG  EDPF  VL N      +G GG          +GD  RNNF+SVVARRL EHG+AH N   G+                         P+ A     A  +  +           DS           V+  P  SA                     R +RS+PR    LRVDLDAVR AR   K                   GG  G+  S   +                          AGDS + SPRS  P +     PL R + G  DV G        +       +RPST VA+AL TD    R  +K    + G  S  GG+V       A  RR   G     VEA A+ +AA                       TA  G V + A+   P PRP A + R+ G +A LSPP            +  E S     XXXXXXXXXXX         XXXXXX  V +PR   P                 GDV   G++ +     AA  ++++     G   G +   +   A ESKPEYTPESDE T  S G+G R            D      DRR   YK          V   P  +G      RG  + S E Q   SKR FF  +          D+G  +    GXXXXXXX                              AERGRLLYE V R+GG A+PKMSP+RP+ +RRPRVVYESLW
Sbjct:   10 SLAFLMNVAGEDSEADDDENDLIAAPSPQQRSPSTPEEKQA---EKKHRHPSGQCGPLLLNHTAAAA--AGHRCRHSSLLPL-ADLDQLMPGLLTCRDDNMSKLATHSDDDSGDQ--ALGHGHGSPAGDKNEQPSTGRTVAVSEFSNLAGTGA--AATVVFPPRKPAAGGDGRAGRSSLGLVPSYSSVEYAGWSKFCLASSDTENEGGSSDSFEQAKE------DESEDDSRTYSITSGEEDDGHVNSDETDPPLRGEQDFFDGGGXXXXXPSSGKSFDSDIHFTVQETQAILRVMERLGCGATTLARFASFTLEDWMDEVCDPIIQDLRGSQSYRASGLDARHRFGREESVPPLKRYISAELYPASTALLRDALPARVRRRAFVNTAAAMRGEAEDPFCSVLGNNERLAVEGVGGGF-----GKGIGDDTRNNFASVVARRLAEHGRAHNNAATGTSRTDVAATSALVGGDRGGPGRSRRGPAAATGGRGAAADVAVRGASHAVSIYRDSSDSESDGGVMEVTAPPGASAIADTASAXXXXXXXXXXXXXGRGERSEPRRSLALRVDLDAVRAARKVPKHAI--------------WTGGGEGNTPSGFEEXXXXXXXXXXXXXXXXXXXXXXXXXXAGDSDSCSPRSSSPPSMFR--PLSRPTGGAPDVAGFA------RLREHHTRQRPSTTVALALNTDTKGQRHPAKSFKAAAGRGSAVGGSVVGYGWQGASPRRGAPGSARPAVEAAAAVVAA-----------EAKKIAEPERATTASRGRVRVTATRRIPAPRPAARLARKHGVMAGLSPPPPSQAGSMPTPAAKSETSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAMPREFSP-----------------GDVCGSGTKAAEPSAAAAAGEKRYADACCGTEAGFTTAAVAESATESKPEYTPESDEATATSSGEGSREQDLQAGTLRSGD-----LDRRHACYKHGAAVLGKDGVGPGPQRKG------RGDERRSGEQQATRSKRVFFASSXXXXXXXXXXDKGTGSLYHQGXXXXXXXEFDRHSTRPAVVPAPAPAEPMNVPAA---GAERGRLLYEQVIRMGGAAQPKMSPLRPLPKRRPRVVYESLW 1062
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BLAST of mRNA_S-firma_M_contig965.20646.1 vs. uniprot
Match: D7FQW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW5_ECTSI)

HSP 1 Score: 359 bits (921), Expect = 1.210e-109
Identity = 225/415 (54.22%), Postives = 263/415 (63.37%), Query Frame = 1 
Query:  124 EHQQRYPSWQRGPLLLNEAGAGDRRRDHQQQHRHSPPLFVNLAPIMPGLLTCREDNMSKLAIYSSDDDSDLDDADKDELNGATGRHEDQPSTGRTEAVSEFSNLAGMSATAAASSVFPLKRGAMAGDAVGGRTLELVPSYSTTVYAGWSKFCLATSDGEQXXXXXXXXXXXXXXXXDGGDNESPDSCTYSITS----EDDLKSDETDPPPLGARDDFG----------------STAEIEFTPQETQAILRVVDRLNCGATALAKIAAFSLEDWLGDVCGPIIRDLNGSESYRSTGLNAQHRFGRHESIPPLKRFINARLSPASPALLRDALPARVRRRAFLNTAATMRGTLEDPFSKVLANDGKGGXXXXXXSA-PSLGDHNRNNFSSVVARRLIEHGQAHYNVIAGSGHPSCA 1305
            E + R+PS Q GPLLLN                  PP   +L P+MPGLLTCR+DNMSKLA YS DDDSD D A  D      G   +QPSTGRT AVSEFSNLAG SA  AA+ VFP ++ A  GD   GR+L LVPSYS+  YAGWSKFCLA+SD E                    D    DS TYSITS    E  + SDETDPP  G +D F                 S ++I FT QETQAILRV++RL CGAT LA+ A+F+LEDW+ +VC PII+DL GS+SYR++GL+A+HRFGR ESIPPLKR+I+A L PAS ALLRDALPARVRRRAF+NTAA MRG  EDPF  VL N+G+             +GD  RNNF+SVVARRL EHG+AHYNV  G+     A
Sbjct:   37 EKKLRHPSGQCGPLLLNHTXXXXXXXXXXXXXXLLPP--ADLDPLMPGLLTCRDDNMSKLATYS-DDDSD-DQALGDGRGKPAGDTNEQPSTGRTVAVSEFSNLAGTSA--AATVVFPPRKPAADGDGRAGRSLGLVPSYSSVEYAGWSKFCLASSDTENEGGSSGSFEQAKE------DESEDDSRTYSITSGEEDEGHVNSDETDPPLRGEQDGFDGGXXXXXXXXXXXXXXSDSDIHFTVQETQAILRVMERLGCGATTLARFASFTLEDWMDEVCDPIIQDLRGSQSYRASGLDARHRFGREESIPPLKRYISAELYPASTALLRDALPARVRRRAFVNTAAAMRGEAEDPFCSVLGNNGRLAIEGVGGGVGKGIGDDTRNNFASVVARRLAEHGRAHYNVADGASRTGVA 439
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig965.20646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBA9_9PHAE2.830e-12238.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQW5_ECTSI1.210e-10954.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig965contigS-firma_M_contig965:2809..9102 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-02_003140.1
Exons6
Model size3072
Cds size3057
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828801.5207596-CDS-S-firma_M_contig965:2808..38121622828801.5207596-CDS-S-firma_M_contig965:2808..3812Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig965 2809..3812 -
1697105170.9425964-CDS-S-firma_M_contig965:2808..38121697105170.9425964-CDS-S-firma_M_contig965:2808..3812Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig965 2809..3812 -
1622828801.5332627-CDS-S-firma_M_contig965:3959..48691622828801.5332627-CDS-S-firma_M_contig965:3959..4869Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig965 3960..4869 -
1697105170.9574747-CDS-S-firma_M_contig965:3959..48691697105170.9574747-CDS-S-firma_M_contig965:3959..4869Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig965 3960..4869 -
1622828801.5448015-CDS-S-firma_M_contig965:5656..58101622828801.5448015-CDS-S-firma_M_contig965:5656..5810Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig965 5657..5810 -
1697105170.9690003-CDS-S-firma_M_contig965:5656..58101697105170.9690003-CDS-S-firma_M_contig965:5656..5810Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig965 5657..5810 -
1622828801.5565708-CDS-S-firma_M_contig965:6291..64491622828801.5565708-CDS-S-firma_M_contig965:6291..6449Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig965 6292..6449 -
1697105170.9776204-CDS-S-firma_M_contig965:6291..64491697105170.9776204-CDS-S-firma_M_contig965:6291..6449Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig965 6292..6449 -
1622828801.5682037-CDS-S-firma_M_contig965:7010..72051622828801.5682037-CDS-S-firma_M_contig965:7010..7205Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig965 7011..7205 -
1697105170.9889162-CDS-S-firma_M_contig965:7010..72051697105170.9889162-CDS-S-firma_M_contig965:7010..7205Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig965 7011..7205 -
1622828801.5802171-CDS-S-firma_M_contig965:8451..90871622828801.5802171-CDS-S-firma_M_contig965:8451..9087Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig965 8452..9087 -
1697105170.9973483-CDS-S-firma_M_contig965:8451..90871697105170.9973483-CDS-S-firma_M_contig965:8451..9087Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig965 8452..9087 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828801.593629-UTR-S-firma_M_contig965:9087..91021622828801.593629-UTR-S-firma_M_contig965:9087..9102Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig965 9088..9102 -
1697105171.0056372-UTR-S-firma_M_contig965:9087..91021697105171.0056372-UTR-S-firma_M_contig965:9087..9102Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig965 9088..9102 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig965.20646.1prot_S-firma_M_contig965.20646.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig965 2809..9087 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig965.20646.1

>prot_S-firma_M_contig965.20646.1 ID=prot_S-firma_M_contig965.20646.1|Name=mRNA_S-firma_M_contig965.20646.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=1019bp
MKVAVVDNADESNIFTTTSLSQKSPRGRQQQQQQQPEHQQRYPSWQRGPL
LLNEAGAGDRRRDHQQQHRHSPPLFVNLAPIMPGLLTCREDNMSKLAIYS
SDDDSDLDDADKDELNGATGRHEDQPSTGRTEAVSEFSNLAGMSATAAAS
SVFPLKRGAMAGDAVGGRTLELVPSYSTTVYAGWSKFCLATSDGEQEEDD
DDDSDSFQRRKEDGGDNESPDSCTYSITSEDDLKSDETDPPPLGARDDFG
STAEIEFTPQETQAILRVVDRLNCGATALAKIAAFSLEDWLGDVCGPIIR
DLNGSESYRSTGLNAQHRFGRHESIPPLKRFINARLSPASPALLRDALPA
RVRRRAFLNTAATMRGTLEDPFSKVLANDGKGGGGGGSGSAPSLGDHNRN
NFSSVVARRLIEHGQAHYNVIAGSGHPSCAPPAYNAPRERPLNDDSDTDT
DTESASAVSPATSAYRRKRSQPRCPLRVDLDAVRPARADRKSFGGERGGG
GGGGGGDGVCGGANGDGSSVGIKFSRRNMSCFDCDGAGYRSDEDDEDYYA
GDSAAGSPRSEPPATAMSALPLFRSAGVLDVVGLEPPPADRKSERPSYAE
RPSTKVAVALATDNSNARRSKGALGSEGERSGSGGTVGRADGRRRGDGHK
NSMVEAPASAMAAVEAATKAVAAATTTSSKGSRAMTTAKTGTVSLGASPP
VPRPVAVMERRTGLAVLSPPSSPEASRVSLASAASAAATEASAALPKAKV
AAAAASAAAVVVPRTTQPEIGRKNDTGAAKERKYAGDVGSRRSGAVMMAA
DRKQKHPGDAYGRGHGSSMMDMLARARESKPEYTPESDETTMSVGDGRRG
VQKYGNHYTDTDDADAAADRRGKSYKTDHPDVPTKPSEQGEIQGGARGAR
KGSNEGQQLGSKRAFFGDAARGALPGNGGDEGRTANVRGGGGRRGGGRRG
GDAAPSASAAAAAAAAAAAAAAAREQAAERGRLLYEHVTRLGGVARPKMS
PVRPMHQRRPRVVYESLW*
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mRNA from alignment at S-firma_M_contig965:2809..9102-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig965.20646.1 ID=mRNA_S-firma_M_contig965.20646.1|Name=mRNA_S-firma_M_contig965.20646.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=6294bp|location=Sequence derived from alignment at S-firma_M_contig965:2809..9102- (Sphaerotrichia firma Sfir_13m male)
AGCCATGCCTTCCTCATGAAAGTGGCAGTTGTGGACAACGCCGACGAAAG
CAACATCTTCACGACAACGTCGTTGTCCCAGAAATCGCCACGCGGCAGGC
AGCAGCAGCAGCAGCAGCAGCCAGAGCACCAGCAACGGTATCCTTCCTGG
CAACGCGGTCCCCTGCTGCTCAACGAAGCCGGAGCAGGGGACCGTCGACG
CGACCACCAGCAGCAACACCGCCATTCCCCCCCGTTGTTCGTAAATCTTG
CGCCGATTATGCCGGGACTGCTCACCTGCCGCGAGGACAACATGTCTAAG
CTCGCCATCTACAGCAGCGACGACGACAGCGACCTAGACGACGCCGACAA
GGACGAGCTCAACGGCGCAACCGGCCGCCACGAGGACCAGCCGAGCACCG
GCCGGACGGAGGCCGTCTCCGAGTTCTCCAACCTGGCGGGGATGAGCGCC
ACGGCTGCTGCCAGCAGCGTGTTCCCCCTAAAAAGGGGGGCGATGGCGGG
AGATGCCGTTGGTGGTCGGACTCTGGAGCTGGTGCCCTCTTACTCGACGA
CCGTGTACGCGGGGTGGTCCAAGTTTTGCCTTGCGACAAGTGACGGCGAA
CAGGAGGAAGACGACGATGATGATTCGGATTCCTTCCAGCGGAGGAAGGA
GGTAAGCTCGAGGCAGGCGATGCGCTGCGTCTAGATATATATGCCAGCAG
GGTGGTTGGTGCGTGCTACTGCTGTACAGTACATACACACATACCCCGGT
GTCTAGATATTATTCCATCGGAAATCGTTTTTTGGCGAAGTTTTGTACAA
TAAAATCGTATAGGAAACGAGGTGAGCCGTTGGTGTGTCACACCAAAATT
TCGTGACCCACAAGAGACGTTCAGAGTTCCACCGACCAACGTACAAAAGT
ATATGCCGACGAGCATGGCGAGCGGGCGTTCTGCACCGCGCATGGGGTTT
GGCATTTATGCAGAGTTAGGTAGACCGAGTACGGCTGGTTGAGAGAGTTG
AAGGCGCGCGAGGAATATATCTAATGTGGCGACACAATGTCTTCCCTCGT
TGGCTTGTTGGATGTCGTCGGCTGTTATTGCTGGTGACTCGATTTGCAGA
TACGCACAGCACAACACACGGCACAAGGGGTACGGGACGTTGTTTGCGTC
CGAACCCTCTTTGCTTTCGTTCCGTGCGGTGTGCGGAAATTCCGGCCGGC
CAATGATGAACCAACATGCTCATTTTGCCCCCAACCTTCGCATGCGTTGT
TCGCTGACTGGTGGGAGTAGTGTTGCCGCGGGGCTACGTACCATCCTCCA
ATTTTGTGCCGGTCGCTGGTGGTATCCTGGTCTAGGGAAAGAGTTGTTCG
GTTGTCCTTGGCTTTTAGGCGATGTGCCGCGTTCTGCCCACAGCCCAACG
GGCATTCTTAGTAACATTCGTGAAAATATGCCACTTGCTTCCGCACAACC
GTTTTGAAAGAACGAAAGAAAAATACATGACACCGGACAGACCGCTGTTG
ATTGAGTCGACGGCCCTCTGCATTCATTCTCCCGAACGGGGCGCTGCAGA
AAGACCAATGTGAACGGTCGTGCGACTGATGCATCCAGTCCCTAAAAAAA
CACGCAGCCCTTCCGCACGCCTTGCTGGTACAGAGTAAATGCCATATGAT
TGGGAAAAAATCTCGGAAGAAAACTCTACATCCTGGAAGGAATCCTGACG
GGAAAGAAGAGGAACCCTCCGTATTTGCTGCCCATATTTGAACTCAGATC
CTCGTCCGAGCATTGGTAAAATCGGGGGGTAAACTATCCCCAAGGCAAGG
AACAAAACAAAACAAAAGCGAGACCGCGGCGGCCCGCCCGCCACACGCCC
GTCCTTGAACTCCCCAAACGCAACCTTATTGGTTCTACCCAAAACAGGAC
GGCGGCGACAACGAATCCCCGGACAGCTGCACGTACTCCATCACAAGCGA
AGACGACCTCAAGAGCGACGAGACGGACCCGCCACCGCTGGGAGCGCGAG
ACGACTTCGGCAGCACCGCCGAGATCGAGTTCACGCCGCAGGAGACCCAG
GCGATCCTTCGGGTCGTAGACCGACTAAACTGCGGCGCAACGGTAAGCTC
CGCCTCTACGGTCGTGAGCCGGGGAGGCGTCTTATTGTCTTGCTGTTTTT
GTGCTGAGACTGACGCGTTCAGTCGTCAGAGTCATCGCATCCCTCTCATG
TAGGAAAGCCGGAGTGAGGACATTTTTTTTTTTCGGGGTTTCGTCTCGAG
GCCGAGCAAGGGGGTGCTTCTCGAGTGTGTTACCATGCCGTGGCCGTTTG
ACCTTCCGTTGGCCACGCAATCACAGAAGAAGTCTCCGTCGAGACAGACC
AAGCTTGGCGGGGTGGGGCGCGTGTGTCGCTCTTTTTGAGCGCAGCTCCT
GGTGCCATCCGTACGACAGCGAGAACATATGTAGCACAGAGTCCGCTAAA
GGGACAAATGTTCAAAACCTGGTCCGTCAACACCACCACCACCACCACCA
CCACCACCACCACCACCACCACCACCACCAACAACAACAACAACAACAAC
AACAATCAGCAATCAGCAATCAGCAATCAGTCCTTGAAACATCTTCCTCT
CCTCCCCGTTGCTTCGATGACAAACACTGCCGCGAACCGGCGAACCGGAG
CAGGCCCTCGCCAAGATCGCCGCCTTCAGCCTGGAAGACTGGCTGGGCGA
TGTGTGCGGCCCGATCATCCGCGACCTCAACGGCAGCGAGAGCTACCGCT
CCACCGGGCTGAACGCGCAGCACCGGTTCGGGCGGCACGAGAGCATCCCT
CCTCTCAAGAGGTGCGAGCCGTTGACAAAACGAACAACACGGTTGCGTAC
CCGCTCCTTTCAGGGCCGGAACAAATTTACGACACGACCGCCGCCCCCCA
CTAGTAGACCGCGGCGTGCCTGTTCAGCCGACAGGGGGGGCAAGGGCAAC
GGTAAGGGCTAGGATAAAGCTACCCGTCCCCCTGAACACGCCGGGGGGAA
GAGCTCCGGCGGATAGGCGGGGCAGGTTCGGCCCACAGTTGCTCCTTGAG
GGGGAAACGCGTCGATCGAGGGATCAAACAGACATTTCCGAGGCCACGAA
CGTCCGTACCCCCCCCTACCTCGAGGCGAGAATACCCTTGACTTCCCCCC
GTTTTCCCCCCGTACCTTTGAGGCGTGGGACCGTACACGTTGCGTCTCTC
CCGCCCCTTCTCTCGAGGCGATCGGTAGCACGTTAGCTCCCGGCCCCCTC
CAACATATGTGAAACAATAACAAAACATTCCCCCCGACGCAGGTTTATCA
ATGCCAGGCTTTCCCCGGCGTCTCCAGCCTTGCTCCGCGACGCTCTCCCG
GCGAGAGTGCGCCGGAGGGCCTTCCTGAACACCGCGGCGACGATGCGGGG
AACGCTCGAGGATCCCTTCTCCAAGGTTCTCGCGAACGACGGCAAGGTTT
CCGACGGTCGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCGGCGGCGGC
GGCGGCGGCGGCGGCAGCAGCGACGGCGGCGGCGGTGGGAAGGTAAGGAG
CCTTCTTCGAGTTATTCCTCCTGTCTTGCGTGTACGTACGTACTTCGTCT
ACGTCGTTGGGGGGGGGGGGGGGTCTGTTTACGTCCTGAGCGGGAGGAGA
GCTGACGCCGCCTGGTTTCCGGTTTTTCGGTGTGTGGTTTGTGTGTATGT
GTTTCGGGGGTGTCGTCCGTCCAAGCGGACCCCCGGGGTTTCGAGAAGGT
CTATGTTTTTCAAACATTTCTGCTGGGAGCGAGTTGGCCGCACGCGGTGA
GAGGTAAACAGCAAGGATGTACACATGTTCAGCTCTTTTTTTTGTTCTTC
TTGAGCGCCATCGAAATCCTACACAACAAAATCGCTGGACATACCTGAAC
TCTTGTTTCTATCGGCATCGTCCCAAGCGCGCCGTTATGGCGTTGGTCGA
AGAACCGACGTCTCGAGGTTGGGCGGCCACGCACGCGACTTGGAGTTTTA
GTGCCCATGCTCAATCGACTGGAGGGCTTGAGAAGAAACGGCGTTACCGG
CATTATCCACGGCGCGAAAGCGAACCGTTCGTTGCGATTTGAATAAGAAA
AAAGAAAATGCGCGCGACATACAAAGCAATCGAAACAAAGGTCGAACGTG
CTCTTCCATTCGTCCGCCCGCCAAACACACTAAAAATACAGGAAACCGGA
GGGCCCACCAACAGCAGCAGCAGCAGCACCAAGGGCGGCGGCGGCGGCGG
CTCGGGCTCGGCCCCAAGCCTGGGCGATCACAACCGCAACAACTTCTCGT
CCGTGGTCGCGAGGCGGCTCATCGAGCACGGGCAGGCACACTATAACGTC
ATCGCCGGTTCAGGTCATCCCAGCTGCGCCCCCCCCGCTTACAACGCCCC
CCGCGAACGGCCACTAAACGACGACAGCGACACCGACACCGACACCGAGA
GCGCTTCGGCCGTGTCCCCCGCCACCAGTGCCTACCGCCGGAAGCGGTCG
CAACCACGCTGCCCGCTTAGAGTCGACCTCGACGCTGTTCGCCCGGCCCG
CGCAGACCGGAAATCGTTCGGCGGGGAGCGCGGCGGCGGCGGCGGCGGCG
GCGGCGGCGACGGCGTGTGCGGCGGTGCCAACGGCGACGGTAGTAGCGTC
GGTATCAAATTCTCTCGGCGAAACATGTCCTGCTTTGATTGCGACGGCGC
CGGCTACCGGTCCGACGAGGACGACGAAGACTACTACGCGGGGGACAGCG
CCGCCGGCAGCCCCCGGAGCGAGCCGCCGGCGACGGCGATGTCAGCGCTT
CCCCTGTTCCGGTCGGCCGGGGTGCTCGACGTGGTGGGCCTAGAGCCCCC
GCCCGCCGACCGAAAGAGCGAGCGGCCCTCCTACGCCGAGCGTCCGTCCA
CCAAGGTCGCTGTTGCCCTCGCCACCGACAACAGCAACGCTCGCCGCAGC
AAGGGCGCGCTAGGCTCGGAGGGCGAACGGAGTGGTTCCGGCGGCACAGT
GGGGCGGGCCGATGGTCGGCGGCGAGGTGACGGCCACAAAAACTCGATGG
TTGAAGCGCCGGCATCAGCAATGGCAGCCGTGGAGGCAGCGACGAAGGCG
GTCGCAGCAGCAACAACGACCTCAAGCAAGGGCAGCAGAGCGAGTCAAAG
GATAGTACTTGCGGCCTCAAAGCCCGCTGAGGCCGCCGCCGGCGGCGGGC
GCGGCGGGGGCCATCCGGGGAAGCGGTACCACACCTCCGCGGAGGAGGCG
GTGGCAGCCGCAGCCGCGGTACCGCCTCCCTGCAAAAAAGTGACGACCGC
GAAGACAGGAACGGTGTCTTTGGGGGCTTCACCCCCGGTGCCCAGGCCTG
TGGCGGTCATGGAACGCAGGACAGGCCTGGCCGTTTTGTCGCCGCCGTCG
TCCCCGGAGGCGTCACGGGTGTCGCTAGCGTCTGCGGCGTCTGCGGCAGC
AACAGAGGCATCCGCGGCACTGCCAAAAGCGAAGGTAGCAGCAGCGGCTG
CGTCGGCGGCGGCGGTGGTGGTGCCACGAACAACTCAGCCCGAAATCGGC
CGCAAGAACGATACGGGGGCCGCAAAAGAACGGAAGTACGCCGGGGACGT
CGGCAGCCGCAGAAGCGGTGCGGTGATGATGGCGGCGGACAGAAAGCAGA
AGCACCCCGGAGACGCCTACGGCAGAGGACACGGCAGCAGTATGATGGAC
ATGCTGGCGAGAGCGAGAGAATCGAAGCCCGAGTATACGCCAGAAAGCGA
CGAAACTACGATGTCGGTGGGGGACGGACGAAGAGGGGTTCAGAAGTACG
GCAACCACTACACCGACACCGACGACGCCGACGCCGCCGCCGACAGACGG
GGTAAATCCTACAAAACGGATCATCCCGACGTGCCGACCAAGCCCTCCGA
GCAAGGAGAAATACAAGGAGGAGCAAGAGGAGCAAGAAAAGGGTCGAACG
AGGGCCAGCAACTCGGAAGCAAGCGCGCGTTCTTTGGTGATGCCGCCCGT
GGGGCCCTTCCTGGCAACGGCGGCGACGAGGGCCGAACCGCGAACGTTCG
TGGTGGCGGTGGACGCCGTGGCGGTGGACGCCGTGGTGGGGACGCAGCAC
CGTCAGCATCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAAGAGAGCAAGCGGCGGAGCGGGGTCGTCTCCTGTACGAGCACGT
CACGAGGCTCGGCGGAGTCGCCCGGCCGAAGATGAGCCCCGTCCGCCCGA
TGCACCAGCGCCGCCCGCGGGTCGTGTACGAGAGCTTGTGGTAA
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Coding sequence (CDS) from alignment at S-firma_M_contig965:2809..9102-

>mRNA_S-firma_M_contig965.20646.1 ID=mRNA_S-firma_M_contig965.20646.1|Name=mRNA_S-firma_M_contig965.20646.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=6114bp|location=Sequence derived from alignment at S-firma_M_contig965:2809..9102- (Sphaerotrichia firma Sfir_13m male)
ATGAAAGTGGCAGTTGTGGACAACGCCGACGAAAGCAACATCTTCACGAC
AACGTCGTTGTCCCAGAAATCGCCACGCGGCAGGCAGCAGCAGCAGCAGC
AGCAGCCAGAGCACCAGCAACGGTATCCTTCCTGGCAACGCGGTCCCCTG
CTGCTCAACGAAGCCGGAGCAGGGGACCGTCGACGCGACCACCAGCAGCA
ACACCGCCATTCCCCCCCGTTGTTCGTAAATCTTGCGCCGATTATGCCGG
GACTGCTCACCTGCCGCGAGGACAACATGTCTAAGCTCGCCATCTACAGC
AGCGACGACGACAGCGACCTAGACGACGCCGACAAGGACGAGCTCAACGG
CGCAACCGGCCGCCACGAGGACCAGCCGAGCACCGGCCGGACGGAGGCCG
TCTCCGAGTTCTCCAACCTGGCGGGGATGAGCGCCACGGCTGCTGCCAGC
AGCGTGTTCCCCCTAAAAAGGGGGGCGATGGCGGGAGATGCCGTTGGTGG
TCGGACTCTGGAGCTGGTGCCCTCTTACTCGACGACCGTGTACGCGGGGT
GGTCCAAGTTTTGCCTTGCGACAAGTGACGGCGAACAGGAGGAAGACGAC
GATGATGATTCGGATTCCTTCCAGCGGAGGAAGGAGATGAAAGTGGCAGT
TGTGGACAACGCCGACGAAAGCAACATCTTCACGACAACGTCGTTGTCCC
AGAAATCGCCACGCGGCAGGCAGCAGCAGCAGCAGCAGCAGCCAGAGCAC
CAGCAACGGTATCCTTCCTGGCAACGCGGTCCCCTGCTGCTCAACGAAGC
CGGAGCAGGGGACCGTCGACGCGACCACCAGCAGCAACACCGCCATTCCC
CCCCGTTGTTCGTAAATCTTGCGCCGATTATGCCGGGACTGCTCACCTGC
CGCGAGGACAACATGTCTAAGCTCGCCATCTACAGCAGCGACGACGACAG
CGACCTAGACGACGCCGACAAGGACGAGCTCAACGGCGCAACCGGCCGCC
ACGAGGACCAGCCGAGCACCGGCCGGACGGAGGCCGTCTCCGAGTTCTCC
AACCTGGCGGGGATGAGCGCCACGGCTGCTGCCAGCAGCGTGTTCCCCCT
AAAAAGGGGGGCGATGGCGGGAGATGCCGTTGGTGGTCGGACTCTGGAGC
TGGTGCCCTCTTACTCGACGACCGTGTACGCGGGGTGGTCCAAGTTTTGC
CTTGCGACAAGTGACGGCGAACAGGAGGAAGACGACGATGATGATTCGGA
TTCCTTCCAGCGGAGGAAGGAGGACGGCGGCGACAACGAATCCCCGGACA
GCTGCACGTACTCCATCACAAGCGAAGACGACCTCAAGAGCGACGAGACG
GACCCGCCACCGCTGGGAGCGCGAGACGACTTCGGCAGCACCGCCGAGAT
CGAGTTCACGCCGCAGGAGACCCAGGCGATCCTTCGGGTCGTAGACCGAC
TAAACTGCGGCGCAACGGACGGCGGCGACAACGAATCCCCGGACAGCTGC
ACGTACTCCATCACAAGCGAAGACGACCTCAAGAGCGACGAGACGGACCC
GCCACCGCTGGGAGCGCGAGACGACTTCGGCAGCACCGCCGAGATCGAGT
TCACGCCGCAGGAGACCCAGGCGATCCTTCGGGTCGTAGACCGACTAAAC
TGCGGCGCAACGGCCCTCGCCAAGATCGCCGCCTTCAGCCTGGAAGACTG
GCTGGGCGATGTGTGCGGCCCGATCATCCGCGACCTCAACGGCAGCGAGA
GCTACCGCTCCACCGGGCTGAACGCGCAGCACCGGTTCGGGCGGCACGAG
AGCATCCCTCCTCTCAAGAGGCCCTCGCCAAGATCGCCGCCTTCAGCCTG
GAAGACTGGCTGGGCGATGTGTGCGGCCCGATCATCCGCGACCTCAACGG
CAGCGAGAGCTACCGCTCCACCGGGCTGAACGCGCAGCACCGGTTCGGGC
GGCACGAGAGCATCCCTCCTCTCAAGAGGTTTATCAATGCCAGGCTTTCC
CCGGCGTCTCCAGCCTTGCTCCGCGACGCTCTCCCGGCGAGAGTGCGCCG
GAGGGCCTTCCTGAACACCGCGGCGACGATGCGGGGAACGCTCGAGGATC
CCTTCTCCAAGGTTCTCGCGAACGACGGCAAGGTTTATCAATGCCAGGCT
TTCCCCGGCGTCTCCAGCCTTGCTCCGCGACGCTCTCCCGGCGAGAGTGC
GCCGGAGGGCCTTCCTGAACACCGCGGCGACGATGCGGGGAACGCTCGAG
GATCCCTTCTCCAAGGTTCTCGCGAACGACGGCAAGGGCGGCGGCGGCGG
CGGCTCGGGCTCGGCCCCAAGCCTGGGCGATCACAACCGCAACAACTTCT
CGTCCGTGGTCGCGAGGCGGCTCATCGAGCACGGGCAGGCACACTATAAC
GTCATCGCCGGTTCAGGTCATCCCAGCTGCGCCCCCCCCGCTTACAACGC
CCCCCGCGAACGGCCACTAAACGACGACAGCGACACCGACACCGACACCG
AGAGCGCTTCGGCCGTGTCCCCCGCCACCAGTGCCTACCGCCGGAAGCGG
TCGCAACCACGCTGCCCGCTTAGAGTCGACCTCGACGCTGTTCGCCCGGC
CCGCGCAGACCGGAAATCGTTCGGCGGGGAGCGCGGCGGCGGCGGCGGCG
GCGGCGGCGGCGACGGCGTGTGCGGCGGTGCCAACGGCGACGGTAGTAGC
GTCGGTATCAAATTCTCTCGGCGAAACATGTCCTGCTTTGATTGCGACGG
CGCCGGCTACCGGTCCGACGAGGACGACGAAGACTACTACGCGGGGGACA
GCGCCGCCGGCAGCCCCCGGAGCGAGCCGCCGGCGACGGCGATGTCAGCG
CTTCCCCTGTTCCGGTCGGCCGGGGTGCTCGACGTGGTGGGCCTAGAGCC
CCCGCCCGCCGACCGAAAGAGCGAGCGGCCCTCCTACGCCGAGCGTCCGT
CCACCAAGGTCGCTGTTGCCCTCGCCACCGACAACAGCAACGCTCGCCGC
AGCAAGGGCGCGCTAGGCTCGGAGGGCGAACGGAGTGGTTCCGGCGGCAC
AGTGGGGCGGGCCGATGGTCGGCGGCGAGGTGACGGCCACAAAAACTCGA
TGGTTGAAGCGCCGGCATCAGCAATGGCAGCCGTGGAGGCAGCGACGAAG
GCGGTCGCAGCAGCAACAACGACCTCAAGCAAGGGCAGCAGAGCGAGGCG
GCGGCGGCGGCGGCTCGGGCTCGGCCCCAAGCCTGGGCGATCACAACCGC
AACAACTTCTCGTCCGTGGTCGCGAGGCGGCTCATCGAGCACGGGCAGGC
ACACTATAACGTCATCGCCGGTTCAGGTCATCCCAGCTGCGCCCCCCCCG
CTTACAACGCCCCCCGCGAACGGCCACTAAACGACGACAGCGACACCGAC
ACCGACACCGAGAGCGCTTCGGCCGTGTCCCCCGCCACCAGTGCCTACCG
CCGGAAGCGGTCGCAACCACGCTGCCCGCTTAGAGTCGACCTCGACGCTG
TTCGCCCGGCCCGCGCAGACCGGAAATCGTTCGGCGGGGAGCGCGGCGGC
GGCGGCGGCGGCGGCGGCGGCGACGGCGTGTGCGGCGGTGCCAACGGCGA
CGGTAGTAGCGTCGGTATCAAATTCTCTCGGCGAAACATGTCCTGCTTTG
ATTGCGACGGCGCCGGCTACCGGTCCGACGAGGACGACGAAGACTACTAC
GCGGGGGACAGCGCCGCCGGCAGCCCCCGGAGCGAGCCGCCGGCGACGGC
GATGTCAGCGCTTCCCCTGTTCCGGTCGGCCGGGGTGCTCGACGTGGTGG
GCCTAGAGCCCCCGCCCGCCGACCGAAAGAGCGAGCGGCCCTCCTACGCC
GAGCGTCCGTCCACCAAGGTCGCTGTTGCCCTCGCCACCGACAACAGCAA
CGCTCGCCGCAGCAAGGGCGCGCTAGGCTCGGAGGGCGAACGGAGTGGTT
CCGGCGGCACAGTGGGGCGGGCCGATGGTCGGCGGCGAGGTGACGGCCAC
AAAAACTCGATGGTTGAAGCGCCGGCATCAGCAATGGCAGCCGTGGAGGC
AGCGACGAAGGCGGTCGCAGCAGCAACAACGACCTCAAGCAAGGGCAGCA
GAGCGATGACGACCGCGAAGACAGGAACGGTGTCTTTGGGGGCTTCACCC
CCGGTGCCCAGGCCTGTGGCGGTCATGGAACGCAGGACAGGCCTGGCCGT
TTTGTCGCCGCCGTCGTCCCCGGAGGCGTCACGGGTGTCGCTAGCGTCTG
CGGCGTCTGCGGCAGCAACAGAGGCATCCGCGGCACTGCCAAAAGCGAAG
GTAGCAGCAGCGGCTGCGTCGGCGGCGGCGGTGGTGGTGCCACGAACAAC
TCAGCCCGAAATCGGCCGCAAGAACGATACGGGGGCCGCAAAAGAACGGA
AGTACGCCGGGGACGTCGGCAGCCGCAGAAGCGGTGCGGTGATGATGGCG
GCGGACAGAAAGCAGAAGCACCCCGGAGACGCCTACGGCAGAGGACACGG
CAGCAGTATGATGGACATGCTGGCGAGAGCGAGAGAATCGAAGCCCGAGT
ATACGCCAGAAAGCGACGAAACTACGATGTCGGTGGGGGACGGACGAAGA
GGGGTTCAGAAGTACGGCAACCACTACACCGACACCGACGACGCCGACGC
CGCCGCCGACAGACGGGGTAAATCCTACAAAACGGATCATCCCGACGTGC
CGACCAAGCCCTCCGAGCAAGGAGAAATACAAGGAGGAGCAAGAGGAGCA
AGAAAAGGGTCGAACGAGGGCCAGCAACTCGGAAGCAAGCGCGCGTTCTT
TGGTGATGCCGCCCGTGGGGCCCTTCCTGGCAACGGCGGCGACGAGGGCC
GAACCGCGAACGTTCGTGGTGGCGGTGGACGCCGTGGCGGTGGACGCCGT
GGTGGGGACGCAGCACCGTCAGCATCGGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAAGAGAGCAAGCGGCGGAGCGGGGTCGTC
TCCTGTACGAGCACGTCACGAGGCTCGGCGGAGTCGCCCGGCCGAAGATG
AGCCCCGTCCGCCCGATGCACCAGCGCCGCCCGCGGGTCGTGTACGAGAG
CTTGTGGTAATGACGACCGCGAAGACAGGAACGGTGTCTTTGGGGGCTTC
ACCCCCGGTGCCCAGGCCTGTGGCGGTCATGGAACGCAGGACAGGCCTGG
CCGTTTTGTCGCCGCCGTCGTCCCCGGAGGCGTCACGGGTGTCGCTAGCG
TCTGCGGCGTCTGCGGCAGCAACAGAGGCATCCGCGGCACTGCCAAAAGC
GAAGGTAGCAGCAGCGGCTGCGTCGGCGGCGGCGGTGGTGGTGCCACGAA
CAACTCAGCCCGAAATCGGCCGCAAGAACGATACGGGGGCCGCAAAAGAA
CGGAAGTACGCCGGGGACGTCGGCAGCCGCAGAAGCGGTGCGGTGATGAT
GGCGGCGGACAGAAAGCAGAAGCACCCCGGAGACGCCTACGGCAGAGGAC
ACGGCAGCAGTATGATGGACATGCTGGCGAGAGCGAGAGAATCGAAGCCC
GAGTATACGCCAGAAAGCGACGAAACTACGATGTCGGTGGGGGACGGACG
AAGAGGGGTTCAGAAGTACGGCAACCACTACACCGACACCGACGACGCCG
ACGCCGCCGCCGACAGACGGGGTAAATCCTACAAAACGGATCATCCCGAC
GTGCCGACCAAGCCCTCCGAGCAAGGAGAAATACAAGGAGGAGCAAGAGG
AGCAAGAAAAGGGTCGAACGAGGGCCAGCAACTCGGAAGCAAGCGCGCGT
TCTTTGGTGATGCCGCCCGTGGGGCCCTTCCTGGCAACGGCGGCGACGAG
GGCCGAACCGCGAACGTTCGTGGTGGCGGTGGACGCCGTGGCGGTGGACG
CCGTGGTGGGGACGCAGCACCGTCAGCATCGGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAAGAGAGCAAGCGGCGGAGCGGGGT
CGTCTCCTGTACGAGCACGTCACGAGGCTCGGCGGAGTCGCCCGGCCGAA
GATGAGCCCCGTCCGCCCGATGCACCAGCGCCGCCCGCGGGTCGTGTACG
AGAGCTTGTGGTAA
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