prot_S-firma_M_contig964.20639.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig964.20639.1
Unique Nameprot_S-firma_M_contig964.20639.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length904
Homology
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BLAST of mRNA_S-firma_M_contig964.20639.1 vs. uniprot
Match: D8LBT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT6_ECTSI)

HSP 1 Score: 347 bits (889), Expect = 2.520e-102
Identity = 328/695 (47.19%), Postives = 370/695 (53.24%), Query Frame = 0 
Query:    7 SCRRDVRDLRRQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEAERKAAAQLRRFRDTLQAAAASDKKSIARLQAELCKGAPGSRLLERARCLKRAVERLEGQSNAQALALSAKTAELEGSRQEARALAAALGARKE-ASLPGCGVKGPVTVDELLEMGRAKLMNHDLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGARAESLQIE---LHACTAXXXXXXXXXXXXXXXXRGSNDSLHRAKQQRLEELEDAEREKRRLGDLLEKEQALQTTLREEVAAAREKLRVAVAERGELLRGLQQAKVFNDELAKGKERAEEREREACARCVDVRDGKLALQRALLEQLSASRAEVREERERCQQAEATLSRLAQAAAARSRNRTLPVSPSENDVGRGDGTCSSSAASSSEIGGDRDSSAGAAPPSESF---------RQRDTLVQDYLGKEGAEQFLSDWDEERSSTSSLSSSPPPSPHPLSPVSASLVGGGSTGLLGGPKVQHLLRDDE-----------RRSGSIKRSPPLPPAPPAVSPADGERRHNNTG------APGRGREQLPAAGLTAKIG-------LGDPGLERWASSMVALGRAAARAG 664
            SCRR+VR+LR QC                                  LEAERK+   LRR RD LQ AAA+D+KSI RLQ +LCKG+P SRLL++ARCLKR VE LE +S  QA ALSAKTAELE SR+EARALAAALG R E ASL G    GPVTVDELLE+GRAKLMNHDLAL                                                                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX              L A                     S +SL+RA QQRLEELE   RE RRL  LL++E ALQ  LRE+V AA+E+LRVAVAERGEL+RGL+QAKVFNDELAKGKE+AEERER ACA+C+D ++GKLALQRALLEQLSASRAE+REE++RCQ+AEATL RLA +AA RSRNR LP  P E+D G  D   S S   S  +  +R   A   P + S          R RDTLVQDYLG+EGAEQFLSDWDEERSS SSLS S  P   PLS    S  G  S     G   +  LR                    +  P L  +   +  A     H   G      AP RG E   AA              L DP L+ W  SMVALG+ A RAG
Sbjct:    9 SCRREVRELRLQCRKLSSSNDELKLAADARRKEACASRRRADAAQKELEAERKSGVVLRRVRDALQVAAAADRKSIDRLQGQLCKGSPSSRLLDKARCLKRTVEELESKSTEQAEALSAKTAELEASRREARALAAALGVRAEKASLAGVAT-GPVTVDELLEVGRAKLMNHDLALGMARLSEASGVLASEKQELEDLLVKKTAEIERCKAQTTEVQGELERERKVADGHRAAAAEANASTREARGLAETLRSKEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDARETALSTETQKNEHVAAQLGASKESLYRA-QQRLEELEGVTRENRRLEALLQEEAALQAALREDVNAAKEELRVAVAERGELMRGLRQAKVFNDELAKGKEKAEERERAACAQCIDTKEGKLALQRALLEQLSASRAELREEQKRCQKAEATLGRLADSAAKRSRNRGLP--PLEDD-GESDEGASVSFEESDGVSANRSIGASGTPTTASAAVTSSFEPPRPRDTLVQDYLGREGAEQFLSDWDEERSSASSLSFSSLPLQSPLSTGGRSHGGSRSASFATGRPTEVSLRAQPWTPPPXXXXXXXXXXXXEELPSLAGSSGQIPWASDSPGHTTKGSAPCPGAPERGEEPSTAAATAXXXXXXXXARRLRDPDLKEWTMSMVALGKVA-RAG 697
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig964.20639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBT6_ECTSI2.520e-10247.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 327..375
NoneNo IPR availableCOILSCoilCoilcoord: 12..46
NoneNo IPR availableCOILSCoilCoilcoord: 183..238
NoneNo IPR availableCOILSCoilCoilcoord: 393..413
NoneNo IPR availableCOILSCoilCoilcoord: 242..287
NoneNo IPR availableCOILSCoilCoilcoord: 426..463

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig964contigS-firma_M_contig964:12581..20971 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig964.20639.1mRNA_S-firma_M_contig964.20639.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig964 12502..21273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig964.20639.1 ID=prot_S-firma_M_contig964.20639.1|Name=mRNA_S-firma_M_contig964.20639.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=904bp
MAEADASCRRDVRDLRRQCQNLSKTNEELKSAADAARVEASAARKRAAAA
EKGLEAERKAAAQLRRFRDTLQAAAASDKKSIARLQAELCKGAPGSRLLE
RARCLKRAVERLEGQSNAQALALSAKTAELEGSRQEARALAAALGARKEA
SLPGCGVKGPVTVDELLEMGRAKLMNHDLALEMSRLSETCETLAIDKQEL
EKRLSEESAEMKARRADVAELRGVLERERTEAGEQREETSKANISAREAR
ELAEALQSKEKELLRDLETARGRHDELEAALSTAVERGEEMGARAESLQI
ELHACTAALSTEKQRGEQVAAQLRGSNDSLHRAKQQRLEELEDAEREKRR
LGDLLEKEQALQTTLREEVAAAREKLRVAVAERGELLRGLQQAKVFNDEL
AKGKERAEEREREACARCVDVRDGKLALQRALLEQLSASRAEVREERERC
QQAEATLSRLAQAAAARSRNRTLPVSPSENDVGRGDGTCSSSAASSSEIG
GDRDSSAGAAPPSESFRQRDTLVQDYLGKEGAEQFLSDWDEERSSTSSLS
SSPPPSPHPLSPVSASLVGGGSTGLLGGPKVQHLLRDDERRSGSIKRSPP
LPPAPPAVSPADGERRHNNTGAPGRGREQLPAAGLTAKIGLGDPGLERWA
SSMVALGRAAARAGTGTETETVAGTGAGNAGRRTARSRDDPSLVGEPIVG
EPADDASARCYWSPSPSCSRSRMREDSGGSRAVPQGSHQRDQHHHQHRQQ
LQRSAQQRDATPRVPPPTCRLEQERGEAGSAEGDCAGDSPFLRPSPSQTS
EQSKGFADDGVLSAGSRGSCSGASFGDGGGDRDVGIRVVSSVGRGDGSCR
PGEIEESPADCTGENDPPDEAVEAEPKGPPPPPPPPPPRRSLFDLADQSI
DEI*
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