prot_S-firma_M_contig9615.20612.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9615.20612.1
Unique Nameprot_S-firma_M_contig9615.20612.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length58
Homology
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BLAST of mRNA_S-firma_M_contig9615.20612.1 vs. uniprot
Match: D7G3I0_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I0_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 4.760e-10
Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 0 
Query:   22 GNPYLAVRDYITATSCFDLTLKTHPWLEQEDVYLS 56
            GN YLAVRDY TATSCFDL LKTHP  +QED+YLS
Sbjct:   11 GNAYLAVRDYGTATSCFDLALKTHPGSDQEDIYLS 45
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9615.20612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3I0_ECTSI4.760e-1080.00Calponin-homology (CH) domain-containing protein n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9615contigS-firma_M_contig9615:2642..3614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9615.20612.1mRNA_S-firma_M_contig9615.20612.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9615 2043..3614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9615.20612.1 ID=prot_S-firma_M_contig9615.20612.1|Name=mRNA_S-firma_M_contig9615.20612.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=58bp
MRLLRGWGQEDGAAWPARQSGGNPYLAVRDYITATSCFDLTLKTHPWLEQ
EDVYLSV*
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