prot_S-firma_M_contig954.20529.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig954.20529.1
Unique Nameprot_S-firma_M_contig954.20529.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length408
Homology
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BLAST of mRNA_S-firma_M_contig954.20529.1 vs. uniprot
Match: D8LJ60_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ60_ECTSI)

HSP 1 Score: 483 bits (1242), Expect = 3.230e-166
Identity = 268/316 (84.81%), Postives = 281/316 (88.92%), Query Frame = 0 
Query:   40 IDPREMVEQQEDGLDVGIEPGAGLGY-AMDGDARIISREIYQGKTFDDWDDMEANVRRLARKAGFKVVKDSKGEKRNDGRQKRIVWKCDCAGIKTPRKGSGKDDLSPAPSRERPSKRQGCPFQINATWPEKCLQPGVTRCTLEHNHRLTGPLRAGRQDPVLPEELLAEHVSALKEWARIPVAVRTQMQILRHEFFEGRQLSLEAQRCVHTLSGQEAPRRXXXXXXXXXXXXXXXXXXXVVASLPGSRVNDPVFRDSMTIIGGALRQALESGADAPGLKRRCEGFAEGIRKTTVAAGDGSNLDPSRKRLRMEGDGSP 354
            ++ R + E +E GLDVGIEPGAGLGY  +DG+ RIISREIYQGKTFDDWDDME NVRRLARKAGFK   DSKGEKR DGRQKRIVWKCDCAG+KTPRKG  KD      SRERPSKRQGCPFQINATWPEKCLQPGVTRCTLEHNHRL GPLRAGRQDPVLPEELLAEHVSALKEWARIPVAVRTQMQILRHEFFEGRQLSLEAQRCVHTLSGQEAPRRXXXXXXXXXXXXXXX    VV SLP SR+NDPVFR+SMTIIG ALRQALESGADA GLKRRCEGFAEG+RKTTVAA D  N DPSRKR+R++G GSP
Sbjct:   61 MEQRHVAEPEEPGLDVGIEPGAGLGYPGLDGEMRIISREIYQGKTFDDWDDMEGNVRRLARKAGFK---DSKGEKRADGRQKRIVWKCDCAGMKTPRKGQ-KDLTHDQTSRERPSKRQGCPFQINATWPEKCLQPGVTRCTLEHNHRLAGPLRAGRQDPVLPEELLAEHVSALKEWARIPVAVRTQMQILRHEFFEGRQLSLEAQRCVHTLSGQEAPRRXXXXXXXXXXXXXXXSPGSVVGSLPSSRINDPVFRESMTIIGNALRQALESGADAAGLKRRCEGFAEGLRKTTVAATD--NTDPSRKRIRVDG-GSP 369
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig954.20529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJ60_ECTSI3.230e-16684.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004330FAR1 DNA binding domainPFAMPF03101FAR1coord: 97..186
e-value: 2.0E-7
score: 31.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig954contigS-firma_M_contig954:7650..10983 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig954.20529.1mRNA_S-firma_M_contig954.20529.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig954 7650..10983 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig954.20529.1 ID=prot_S-firma_M_contig954.20529.1|Name=mRNA_S-firma_M_contig954.20529.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=408bp
TRERSPKKNQRLNLASRGWASHSGVMNPVGSPFMSPGPAIDPREMVEQQE
DGLDVGIEPGAGLGYAMDGDARIISREIYQGKTFDDWDDMEANVRRLARK
AGFKVVKDSKGEKRNDGRQKRIVWKCDCAGIKTPRKGSGKDDLSPAPSRE
RPSKRQGCPFQINATWPEKCLQPGVTRCTLEHNHRLTGPLRAGRQDPVLP
EELLAEHVSALKEWARIPVAVRTQMQILRHEFFEGRQLSLEAQRCVHTLS
GQEAPRRRAAAAAAAAAAAAAAAPAAVVASLPGSRVNDPVFRDSMTIIGG
ALRQALESGADAPGLKRRCEGFAEGIRKTTVAAGDGSNLDPSRKRLRMEG
DGSPPPGSVVGAVAAAAMAGIGVAAPPAPVPAPVAGLAAPVAPPVLPAMP
PGSGMPSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004330FAR1_DNA_bnd_dom