prot_S-firma_M_contig9511.20504.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9511.20504.1
Unique Nameprot_S-firma_M_contig9511.20504.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length171
Homology
BLAST of mRNA_S-firma_M_contig9511.20504.1 vs. uniprot
Match: D8LBR5_ECTSI (Vesicle coat complex COPII, subunit SEC31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR5_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 7.010e-96
Identity = 154/162 (95.06%), Postives = 158/162 (97.53%), Query Frame = 0
Query:   10 SNGQPLSKAGEAVIKRSLLVGNFEAAVQCCMATGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKTANAAVNGGTD 171
            SNGQPL+K  EAVIKRSLLVGNFEAAVQCCM+TGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELG LVE SDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELK+ANAA+NGGTD
Sbjct:  382 SNGQPLTKEAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVEGSDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKSANAAINGGTD 543          
BLAST of mRNA_S-firma_M_contig9511.20504.1 vs. uniprot
Match: A0A6H5KCD9_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD9_9PHAE)

HSP 1 Score: 308 bits (789), Expect = 9.020e-95
Identity = 155/163 (95.09%), Postives = 160/163 (98.16%), Query Frame = 0
Query:    9 MSNGQPLSKAGEAVIKRSLLVGNFEAAVQCCMATGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKTANAAVNGGTD 171
            MSNGQPLSK  EAVIKRSLLVGNFEAAVQCCM+TGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELG LV+ASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWA+ELK+ANAA+NGGTD
Sbjct:  602 MSNGQPLSKEAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVDASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWADELKSANAAINGGTD 764          
BLAST of mRNA_S-firma_M_contig9511.20504.1 vs. uniprot
Match: A0A7S3UX94_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX94_HETAK)

HSP 1 Score: 197 bits (501), Expect = 5.710e-61
Identity = 98/146 (67.12%), Postives = 116/146 (79.45%), Query Frame = 0
Query:   20 EAVIKRSLLVGNFEAAVQCCMATGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKTANAA 165
            E +IKR+LLVGNFEAAVQCC+  G MADA++LASCGGA+LWA TQA+YF     +RPFL ++  IIKSELG LV A+ LG W+ETLAILSTYAK +EFP LCEALA+RLE EA D  +A LCYMCAV VPKTV +W  +L+ AN A
Sbjct:   18 EEMIKRALLVGNFEAAVQCCLKNGQMADALILASCGGAELWASTQARYFEAAGTRRPFLDLMACIIKSELGELVGANALGAWEETLAILSTYAKSDEFPVLCEALAARLEGEARDAAAATLCYMCAVNVPKTVGVWLRDLRAANLA 163          
BLAST of mRNA_S-firma_M_contig9511.20504.1 vs. uniprot
Match: A0A7S2Y0E2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E2_9STRA)

HSP 1 Score: 195 bits (496), Expect = 4.960e-58
Identity = 103/157 (65.61%), Postives = 118/157 (75.16%), Query Frame = 0
Query:    8 SMSNGQPLSKA-GEAVIKRSLLVGNFEAAVQCCMATGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKTAN 163
            SM+   P++ A  E VIKR+LLVGNFE AVQCC+  G MADA+++ASCGGADLWAKTQAQYF  E   RPFL +V+AII+SEL  LV  S L  WQETLAILSTYAK EEFP LCE LA RLE+E+ D  SA LCYMCAV V KTV+ W +EL   N
Sbjct:   54 SMAPRDPVADAEAEEVIKRALLVGNFEQAVQCCLKNGQMADALVVASCGGADLWAKTQAQYFETEGAYRPFLNIVSAIIRSELSKLVTTSKLTSWQETLAILSTYAKSEEFPGLCENLAERLESESFDVASATLCYMCAVNVHKTVQTWLDELHQVN 210          
BLAST of mRNA_S-firma_M_contig9511.20504.1 vs. uniprot
Match: F0YCL1_AURAN (Sec16_C domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCL1_AURAN)

HSP 1 Score: 192 bits (489), Expect = 1.510e-54
Identity = 96/152 (63.16%), Postives = 117/152 (76.97%), Query Frame = 0
Query:   12 GQPLSKAGEAVIKRSLLVGNFEAAVQCCMATGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKTAN 163
            G PL  A EA +K++LLVGNF+AAV+ C ATG +ADA+LLASCGGA+LW +T+A+YF   S  +PFL VV AII +ELG LV ASDL +W+ETLAILSTY K +EFP LCEAL  RLE EA D K+A LCYMCAV VPKTV+ W ++   A+
Sbjct:  577 GAPLDAAAEADVKQALLVGNFDAAVESCFATGALADALLLASCGGAELWERTRARYFDISSKAKPFLGVVRAIITNELGALVAASDLRKWEETLAILSTYGKSDEFPALCEALGGRLEHEARDDKAAALCYMCAVNVPKTVKFWIDDFNAAS 728          
BLAST of mRNA_S-firma_M_contig9511.20504.1 vs. uniprot
Match: A0A1E7FBK0_9STRA (WD40 repeat-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBK0_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.780e-53
Identity = 95/170 (55.88%), Postives = 127/170 (74.71%), Query Frame = 0
Query:    2 SMSMSMSMSNGQPLSKAGEAVIKRSLLVGNFEAAVQCCMATGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKTANAAVNGGTD 171
            SMS+S    N   +S+  + ++K++L+VGNFEAAV CC  TGN+ADA++LASCGGADLWAKTQ +YF  +S +RPFL VV AII++EL  L+++SDL  WQETLAILSTY K +EFP LC AL  RLE E+GD  SA+LC+MCA+ + K ++ W  +L  +NA+ +G  D
Sbjct:  509 SMSLSDGSHNDTGMSQPTQDIVKQALMVGNFEAAVDCCFRTGNLADALVLASCGGADLWAKTQERYFESQSSKRPFLSVVGAIIRNELPSLIQSSDLATWQETLAILSTYGKSDEFPQLCVALGDRLE-ESGDHSSASLCFMCALSLNKAIKYWRTQLANSNASKDGDMD 677          
BLAST of mRNA_S-firma_M_contig9511.20504.1 vs. uniprot
Match: A0A7S4EAB3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAB3_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.170e-50
Identity = 93/160 (58.13%), Postives = 118/160 (73.75%), Query Frame = 0
Query:    1 MSMSMSMSMSNGQPLSKAGEAVIKRSLLVGNFEAAVQCCMATGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELK 160
            +S+S   S+    PL+ A EA +KR+LLVGNF+AAV+ C   G +ADA+LLASCGGA+LW KT+A+YF + + +RPFL VV AII +EL  LV+ +DL +W+ETLAILSTY K EEFP LCEAL  RLE E  D+ +A+LCYMCAV V KTV  W  + K
Sbjct:  525 LSISSDRSIEEKSPLTPAAEADVKRALLVGNFDAAVEGCFKNGALADALLLASCGGAELWEKTRARYFEKAARKRPFLGVVRAIITNELDQLVQTADLNKWEETLAILSTYGKSEEFPQLCEALGQRLENEKRDQTAASLCYMCAVNVAKTVSFWISDYK 684          
BLAST of mRNA_S-firma_M_contig9511.20504.1 vs. uniprot
Match: A0A6V2GAE0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2GAE0_9STRA)

HSP 1 Score: 182 bits (462), Expect = 3.200e-50
Identity = 89/149 (59.73%), Postives = 117/149 (78.52%), Query Frame = 0
Query:   15 LSKAGEAVIKRSLLVGNFEAAVQCCMATGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKTAN 163
            +S+  E ++K +LLVGNFEAAV CC   GN+ADA++LASCGGA+LWAKTQA+YFARE+ +RPFL +V+A+I ++L  LV ASD  +WQETLAILSTY K EEFP LC AL +RLE  AGD  SA+LC+MCA+ + + V+ W  +L+ A+
Sbjct:  507 MSEKAEDIVKEALLVGNFEAAVDCCFRNGNLADALVLASCGGAELWAKTQAEYFAREAQKRPFLSIVSAVIHNQLEDLVAASDPSKWQETLAILSTYGKSEEFPLLCLALGNRLEG-AGDGASASLCFMCALNLDRAVKHWKTQLEKAD 654          
BLAST of mRNA_S-firma_M_contig9511.20504.1 vs. uniprot
Match: A0A7S4VZF3_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VZF3_9STRA)

HSP 1 Score: 182 bits (462), Expect = 4.290e-50
Identity = 89/149 (59.73%), Postives = 117/149 (78.52%), Query Frame = 0
Query:   15 LSKAGEAVIKRSLLVGNFEAAVQCCMATGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKTAN 163
            +S+  E ++K +LLVGNFEAAV CC   GN+ADA++LASCGGA+LWAKTQA+YFARE+ +RPFL +V+A+I ++L  LV ASD  +WQETLAILSTY K EEFP LC AL +RLE  AGD  SA+LC+MCA+ + + V+ W  +L+ A+
Sbjct:  507 MSEKAEDIVKEALLVGNFEAAVDCCFRNGNLADALVLASCGGAELWAKTQAEYFAREAQKRPFLSIVSAVIHNQLEDLVAASDPSKWQETLAILSTYGKSEEFPLLCLALGNRLEG-AGDGASASLCFMCALNLDRAVKHWKTQLEKAD 654          
BLAST of mRNA_S-firma_M_contig9511.20504.1 vs. uniprot
Match: A0A7S0UP54_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UP54_9STRA)

HSP 1 Score: 179 bits (453), Expect = 5.620e-50
Identity = 89/156 (57.05%), Postives = 117/156 (75.00%), Query Frame = 0
Query:   11 NGQP-LSKAGEAVIKRSLLVGNFEAAVQCCMATGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGGLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKTANAA 165
            +G P +S+  + V+K +L+VGNFEAAV CC  TGN+ADA++LAS GG DLWAKTQ +YF  ++ +RPFL VV AII+++LG LVE S+L  WQETLAILSTY K +EFP LC AL  +L+  AGD  SA+LCYMCA+ + K V+ W  +L+  NA+
Sbjct:   69 HGNPDMSQTTQNVVKEALMVGNFEAAVDCCFRTGNLADALVLASSGGGDLWAKTQERYFESQAKKRPFLSVVGAIIQNDLGSLVENSNLSNWQETLAILSTYGKSDEFPALCVALGDKLDA-AGDHSSASLCYMCALSLNKAVKHWRTKLEEQNAS 223          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9511.20504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBR5_ECTSI7.010e-9695.06Vesicle coat complex COPII, subunit SEC31 n=1 Tax=... [more]
A0A6H5KCD9_9PHAE9.020e-9595.09WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A7S3UX94_HETAK5.710e-6167.12Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2Y0E2_9STRA4.960e-5865.61Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
F0YCL1_AURAN1.510e-5463.16Sec16_C domain-containing protein (Fragment) n=1 T... [more]
A0A1E7FBK0_9STRA1.780e-5355.88WD40 repeat-like protein n=1 Tax=Fragilariopsis cy... [more]
A0A7S4EAB3_9STRA1.170e-5058.13Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A6V2GAE0_9STRA3.200e-5059.73Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4VZF3_9STRA4.290e-5059.73Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S0UP54_9STRA5.620e-5057.05Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.1030coord: 2..171
e-value: 6.1E-55
score: 189.3
NoneNo IPR availablePANTHERPTHR13923:SF11SEC31 ORTHOLOG, ISOFORM Dcoord: 15..162
IPR024298Ancestral coatomer element 1, Sec16/Sec31PFAMPF12931Sec16_Ccoord: 23..148
e-value: 3.2E-8
score: 33.6
IPR040251Protein transport protein SEC31-likePANTHERPTHR13923SEC31-RELATED PROTEINcoord: 15..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9511contigS-firma_M_contig9511:549..2480 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9511.20504.1mRNA_S-firma_M_contig9511.20504.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9511 549..2480 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9511.20504.1 ID=prot_S-firma_M_contig9511.20504.1|Name=mRNA_S-firma_M_contig9511.20504.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=171bp
MSMSMSMSMSNGQPLSKAGEAVIKRSLLVGNFEAAVQCCMATGNMADAML
LASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGGLVEASDLGQ
WQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPK
TVEMWAEELKTANAAVNGGTD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040251SEC31-like
IPR024298ACE1_Sec16_Sec31