prot_S-firma_M_contig9482.20464.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9482.20464.1
Unique Nameprot_S-firma_M_contig9482.20464.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length87
Homology
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BLAST of mRNA_S-firma_M_contig9482.20464.1 vs. uniprot
Match: D7G0P2_ECTSI (Origin recognition complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P2_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 4.680e-40
Identity = 69/83 (83.13%), Postives = 74/83 (89.16%), Query Frame = 0 
Query:    1 YGSYLRTYSTCHLRFSRAVIFKAFRQLAEQGLLRSAESGTGGGREAHPMLHCRFRSRFDLDQVRRALEKSVIAAPTNVTRWCK 83
            YGSYLR + TCHLRFSRAVIFKAF QL EQG LRSAE GTGGGREAHP+LHCRFRS FD++QV RALEK+VIAAPTNV RWCK
Sbjct:  420 YGSYLREFRTCHLRFSRAVIFKAFSQLVEQGALRSAEPGTGGGREAHPVLHCRFRSHFDIEQVERALEKNVIAAPTNVARWCK 502
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BLAST of mRNA_S-firma_M_contig9482.20464.1 vs. uniprot
Match: A0A6H5JJU9_9PHAE (Origin recognition complex subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU9_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 1.510e-38
Identity = 67/83 (80.72%), Postives = 73/83 (87.95%), Query Frame = 0 
Query:    1 YGSYLRTYSTCHLRFSRAVIFKAFRQLAEQGLLRSAESGTGGGREAHPMLHCRFRSRFDLDQVRRALEKSVIAAPTNVTRWCK 83
            YGSYLR + TCHLRFSRA+IFKAF QL EQG LRSAE GTGGGREAHP+LHCRFRS FD++QV RALEK+VI APTNV RWCK
Sbjct:  461 YGSYLREFRTCHLRFSRAMIFKAFSQLVEQGALRSAEPGTGGGREAHPVLHCRFRSHFDIEQVERALEKNVINAPTNVARWCK 543
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BLAST of mRNA_S-firma_M_contig9482.20464.1 vs. uniprot
Match: A0A6H5K6K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K5_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.420e-18
Identity = 38/49 (77.55%), Postives = 42/49 (85.71%), Query Frame = 0 
Query:   35 SAESGTGGGREAHPMLHCRFRSRFDLDQVRRALEKSVIAAPTNVTRWCK 83
            S E+  GGGREAHP+LHCRFRS FD+ QV RALEK+VIAAPTNV RWCK
Sbjct:  139 SLETLNGGGREAHPVLHCRFRSHFDIGQVERALEKNVIAAPTNVARWCK 187
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9482.20464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0P2_ECTSI4.680e-4083.13Origin recognition complex subunit 4 n=1 Tax=Ectoc... [more]
A0A6H5JJU9_9PHAE1.510e-3880.72Origin recognition complex subunit 4 n=1 Tax=Ectoc... [more]
A0A6H5K6K5_9PHAE1.420e-1877.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9482contigS-firma_M_contig9482:2831..3760 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9482.20464.1mRNA_S-firma_M_contig9482.20464.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9482 2219..3760 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9482.20464.1 ID=prot_S-firma_M_contig9482.20464.1|Name=mRNA_S-firma_M_contig9482.20464.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=87bp
YGSYLRTYSTCHLRFSRAVIFKAFRQLAEQGLLRSAESGTGGGREAHPML
HCRFRSRFDLDQVRRALEKSVIAAPTNVTRWCKHLE*
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