prot_S-firma_M_contig9473.20453.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9473.20453.1
Unique Nameprot_S-firma_M_contig9473.20453.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length96
Homology
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BLAST of mRNA_S-firma_M_contig9473.20453.1 vs. uniprot
Match: D7G6Q4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q4_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 6.360e-15
Identity = 50/79 (63.29%), Postives = 56/79 (70.89%), Query Frame = 0 
Query:   19 GGSEARLGGDGSNNPAAGVEDGRKLLEQFRRQRRASSVDRGSQAARGRGGQ----RGPRALSGPSPYSAHLARGAYHPS 93
            GG  +   G  +N  AAGVEDGRKLL+QFRRQRRASSVDRG QA RGRG      R PR LSG SP+S+H A GA+H S
Sbjct:   26 GGDVSTADGSTTNPGAAGVEDGRKLLDQFRRQRRASSVDRGLQATRGRGAHVSRLRRPRELSGASPHSSHHAWGAHHAS 104
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9473.20453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6Q4_ECTSI6.360e-1563.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9473contigS-firma_M_contig9473:1711..3676 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9473.20453.1mRNA_S-firma_M_contig9473.20453.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9473 1578..3676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9473.20453.1 ID=prot_S-firma_M_contig9473.20453.1|Name=mRNA_S-firma_M_contig9473.20453.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=96bp
MSSSANPAEDGLDSSRTAGGSEARLGGDGSNNPAAGVEDGRKLLEQFRRQ
RRASSVDRGSQAARGRGGQRGPRALSGPSPYSAHLARGAYHPSEAT
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