prot_S-firma_M_contig9461.20447.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9461.20447.1
Unique Nameprot_S-firma_M_contig9461.20447.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length264
Homology
BLAST of mRNA_S-firma_M_contig9461.20447.1 vs. uniprot
Match: A0A6H5JJB7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJB7_9PHAE)

HSP 1 Score: 343 bits (881), Expect = 1.070e-115
Identity = 208/268 (77.61%), Postives = 227/268 (84.70%), Query Frame = 0
Query:    3 FQTVAAAAGLAVTAVGSVSGFVSPPPAA-GCHRSAFLRHGASNARPVSSLATPNRAPTAGAAASMSLKPPRKQR--FPLWLRPGAA--GQSLGRGLSLLRRAAAETDDDEDMYEDEDGEGEEY-DGEEDLDRSVIKQLKRSTTVFRQVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGWRNLGTLAEVDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYSQG 264
            FQ  +A A LA+T VGSV+GFV PPPAA GCHRSAFL  GASN+R +    TP R+PT GAA  MSL+P R+Q+   P W+RPGAA  G   GR  S LR  AAE D+ E+MYE +D +GEEY DGEE LDRSVIKQLKRSTTVFRQVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALA+ASLACSAASICWTWGY LKAKGWRNLGTLAEVDDAQ+RMR SL+MGLYINVAGMLLAL+GAEQIVGTLVAKVLY+QG
Sbjct:    4 FQMGSATAVLALT-VGSVAGFVPPPPAAAGCHRSAFLCRGASNSRAL----TP-RSPTTGAAL-MSLEPFRRQQRILPRWVRPGAAARGGLFGRVPSRLRGVAAEEDEGEEMYEYDDVDGEEYNDGEEILDRSVIKQLKRSTTVFRQVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALAVASLACSAASICWTWGYNLKAKGWRNLGTLAEVDDAQVRMRGSLRMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQG 264          
BLAST of mRNA_S-firma_M_contig9461.20447.1 vs. uniprot
Match: A0A836CL61_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL61_9STRA)

HSP 1 Score: 139 bits (351), Expect = 2.750e-36
Identity = 92/191 (48.17%), Postives = 121/191 (63.35%), Query Frame = 0
Query:   83 GAAGQSLGRGLSLLR---RAAAETDDDEDM--YE--DEDGEGEEYDGEEDLDRSVIKQLKRSTTVFRQVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGW--RNLGTLAEVDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYSQG 264
            G A Q   + L  L    RA    DDDE++  YE  D+  E  E    E L+ + + +LK   + F+++ W SWW+QTILSTV+ II+LFSNA+T RS RGN LGNGV LA  ++A + AS+ WTW   LKA  W  RN    +   +AQ  +  +LK+G++IN+ G L AL+GAEQIVGTLVAKVLYS G
Sbjct:   39 GCAWQQRRKALLQLTTPLRANQADDDDEEVEYYEEVDDSDEAGELQESEVLENAQLARLKLGASNFQRLGWFSWWSQTILSTVSAIIILFSNAITERSVRGNALGNGVFLAGLAVASAGASMFWTWTLILKATAWVGRNEKKRSTPTEAQRNIIRALKVGVWINLLGALFALVGAEQIVGTLVAKVLYSGG 229          
BLAST of mRNA_S-firma_M_contig9461.20447.1 vs. uniprot
Match: A0A7S2V450_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V450_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.980e-24
Identity = 60/132 (45.45%), Postives = 85/132 (64.39%), Query Frame = 0
Query:  132 KQLKRSTTVFRQVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGWRNLGTLAEVDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYSQ 263
            +++ + +  F++++W+SWW Q IL+TVA +IL F+ AVT+   R N L NG  LA   +     SI WTWG    A+ W+   T  ++D A   M N LK  + IN+ GML+AL+GAEQIVGTLVAK+L +Q
Sbjct:   79 RRIWKLSNYFQRIAWISWWTQVILTTVAGVILFFTTAVTDPG-RANFLVNGTFLAGCGVTLGLISIFWTWGIARAARRWKRRST--DLDQACASMGNRLKAAVLINLMGMLVALVGAEQIVGTLVAKILQTQ 207          
BLAST of mRNA_S-firma_M_contig9461.20447.1 vs. uniprot
Match: A0A7S3XU47_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU47_HETAK)

HSP 1 Score: 106 bits (264), Expect = 2.750e-23
Identity = 61/133 (45.86%), Postives = 83/133 (62.41%), Query Frame = 0
Query:  132 KQLKRSTTVFRQVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGWRNLGTLAEVDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYSQG 264
            K+++  +  F+  +W SWWAQ ILSTVA +IL F++A+T+   R N+  NG  LA   +     S  WTWGY   AK W+  G  A+++  Q  M   L+ G ++N  GM +AL GAEQIVGTLVAKVL +QG
Sbjct:   96 KRIRNLSNGFQNAAWTSWWAQVILSTVAGVILFFASAITDP--RVNMFMNGTLLAGCGVFFGLVSTFWTWGYASAAKRWKRPG--ADLEKLQRAMLRRLEFGHFVNTLGMAVALTGAEQIVGTLVAKVLSAQG 224          
BLAST of mRNA_S-firma_M_contig9461.20447.1 vs. uniprot
Match: L1JCY2_GUITC (Translocon at the inner envelope membrane of chloroplast 21 like protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JCY2_GUITC)

HSP 1 Score: 87.0 bits (214), Expect = 3.220e-17
Identity = 55/120 (45.83%), Postives = 73/120 (60.83%), Query Frame = 0
Query:  142 RQVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGWRNLGTLAEVDDAQLRMRN---SLKMGLYINVAGMLLALIGAEQIVGTLVAK 258
            RQ SWLSWWAQ ILS ++ I L F+NAV     +GNIL NGV +A   LA S  ++ WT GY       R      E  +A +  R+   ++++G+ + + GM L L+GAEQIVGTLVAK
Sbjct:    2 RQSSWLSWWAQVILSVISAITLFFANAVRGPM-QGNILANGVFMAGLGLALSFINVIWTTGYQ------RIAAKQLETPEAAMSFRSFSRTVRVGVIVALTGMFLTLLGAEQIVGTLVAK 114          
BLAST of mRNA_S-firma_M_contig9461.20447.1 vs. uniprot
Match: A0A0M0JU81_9EUKA (Copper uptake transmembrane transporter n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JU81_9EUKA)

HSP 1 Score: 85.9 bits (211), Expect = 8.530e-17
Identity = 55/121 (45.45%), Postives = 71/121 (58.68%), Query Frame = 0
Query:  144 VSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGWRNLG--TLAEVDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYS 262
            + W+SWW+Q ILST++ ++LLF+N VT R     ILG   AL L  L  + AS  WT  Y   A   R LG  T    +DA  R  N   +G ++N+ GM+L L+GAE IVGTL AK L S
Sbjct:   20 IGWVSWWSQAILSTISAVLLLFANTVTVRPTALTILGR--ALTLGGLVAAIASTLWTVAYGRLA---RRLGRATPPTAEDAAERAANIATVGTWLNIVGMVLCLLGAEAIVGTLAAKALQS 135          
BLAST of mRNA_S-firma_M_contig9461.20447.1 vs. uniprot
Match: A0A4D9D048_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D048_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.900e-16
Identity = 54/138 (39.13%), Postives = 76/138 (55.07%), Query Frame = 0
Query:  133 QLKRSTTVFRQVSWLSWWAQTILSTVAFIILLFSNAVTNRSARG------NILGNGVALALASLACSAASICWTWGYTLKAKGWRNLGTLAEVDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYSQG 264
            +L++ +      +W SWWAQ I +TVA +IL F+N+    S  G      +I  NG   A + L   A SI WTWG+T  AK  R    + E   +   +R  ++  + IN+ G+L ALIGAEQ VG L+A+VL  QG
Sbjct:   93 ELRQYSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAASGLCLGAISIFWTWGFTGVAKRIRR--AVLEPPTSLAMVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQG 228          
BLAST of mRNA_S-firma_M_contig9461.20447.1 vs. uniprot
Match: A0A7S0GKD1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKD1_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.370e-16
Identity = 52/128 (40.62%), Postives = 70/128 (54.69%), Query Frame = 0
Query:  137 STTVFRQVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGWRNLGTLAEVDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYSQG 264
            ++   R+ SW SWW Q ILSTV+ + LLF+ +V      G   G    LA + +  S  S+ WTWG    +K      +   +  A L  RN + +GL +N+ GM L L+GAEQIVG L AKVL  QG
Sbjct:   24 TSQALRKCSWFSWWTQVILSTVSGVTLLFARSVLMSGIEGKKRGAEFILAGSGIVLSIISVFWTWGGARISKRLMRRPSTTRIKAANLLRRN-ISVGLTLNLLGMFLTLLGAEQIVGMLAAKVLTQQG 150          
BLAST of mRNA_S-firma_M_contig9461.20447.1 vs. uniprot
Match: A0A7S1XJJ2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJJ2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.280e-15
Identity = 52/126 (41.27%), Postives = 73/126 (57.94%), Query Frame = 0
Query:  143 QVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVA----LALASLACSAASICWTWGYTLKAKGWRNLGTLAEVDDAQLRMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVLYSQG 264
            +  W SWW QT+L+ +A I LLF+      +     + +G A    LA   ++ SA S+ WTWG+T  A+  R    L    +A+L +R +L+ G+ +N+ GM   L GAEQIVGTLVAKVL  QG
Sbjct:   28 RAGWTSWWIQTVLTVIASITLLFARTFAAAAGGSTAIQSGGAGGLFLAGLGVSLSALSVFWTWGFTRVARRLRKGEDLTPRLEARL-IRRALRTGIVLNLVGMFATLFGAEQIVGTLVAKVLSFQG 152          
BLAST of mRNA_S-firma_M_contig9461.20447.1 vs. uniprot
Match: A0A8J5XCA0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCA0_DIALT)

HSP 1 Score: 81.6 bits (200), Expect = 8.490e-15
Identity = 51/127 (40.16%), Postives = 69/127 (54.33%), Query Frame = 0
Query:  136 RSTTVFRQVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWTWGYTLKAKGWRNLGTLAEVDDAQL--RMRNSLKMGLYINVAGMLLALIGAEQIVGTLVAKVL 260
            R +  F   SW SWW Q ILS V+ + L F+NA    +   N L +G+ L+ A + C   S  W WGY    +G+      A+VD  QL  + R SL++G+ IN+ GM L LI AEQ +G L  K L
Sbjct:   66 RESRAFGAASWFSWWGQVILSVVSTVTLTFANAARGST---NPLLSGIVLSTAGVLCGFVSTFWMWGY----QGFAKRLLRADVDLTQLATQARRSLRLGISINLVGMALTLISAEQTIGVLAGKAL 185          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9461.20447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJB7_9PHAE1.070e-11577.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CL61_9STRA2.750e-3648.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V450_9STRA1.980e-2445.45Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XU47_HETAK2.750e-2345.86Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
L1JCY2_GUITC3.220e-1745.83Translocon at the inner envelope membrane of chlor... [more]
A0A0M0JU81_9EUKA8.530e-1745.45Copper uptake transmembrane transporter n=1 Tax=Ch... [more]
A0A4D9D048_9STRA1.900e-1639.13Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S0GKD1_9STRA2.370e-1640.63Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1XJJ2_9STRA2.280e-1541.27Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8J5XCA0_DIALT8.490e-1540.16Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022051Protein of unknown function DUF3611PFAMPF12263DUF3611coord: 133..262
e-value: 5.9E-26
score: 91.4
IPR022051Protein of unknown function DUF3611PANTHERPTHR34548FAMILY NOT NAMEDcoord: 116..262
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 167..177
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 203..233
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 262..264
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..202
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 234..261
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.518
NoneNo IPR availableTMHMMTMhelixcoord: 234..256
NoneNo IPR availableTMHMMTMhelixcoord: 146..168
NoneNo IPR availableTMHMMTMhelixcoord: 183..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9461contigS-firma_M_contig9461:1379..3742 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9461.20447.1mRNA_S-firma_M_contig9461.20447.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9461 1379..3742 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9461.20447.1 ID=prot_S-firma_M_contig9461.20447.1|Name=mRNA_S-firma_M_contig9461.20447.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=264bp
MRFQTVAAAAGLAVTAVGSVSGFVSPPPAAGCHRSAFLRHGASNARPVSS
LATPNRAPTAGAAASMSLKPPRKQRFPLWLRPGAAGQSLGRGLSLLRRAA
AETDDDEDMYEDEDGEGEEYDGEEDLDRSVIKQLKRSTTVFRQVSWLSWW
AQTILSTVAFIILLFSNAVTNRSARGNILGNGVALALASLACSAASICWT
WGYTLKAKGWRNLGTLAEVDDAQLRMRNSLKMGLYINVAGMLLALIGAEQ
IVGTLVAKVLYSQG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022051DUF3611