prot_S-firma_M_contig946.20446.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig946.20446.1
Unique Nameprot_S-firma_M_contig946.20446.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length89
Homology
BLAST of mRNA_S-firma_M_contig946.20446.1 vs. uniprot
Match: A0A6H5K163_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K163_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.340e-19
Identity = 39/52 (75.00%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    4 VQFNSGTWTVEEHQGFLRGLEVYGSGNWEAIGVFVPTRSSLQIQDYARQHFA 55
            VQ N G WT EEHQGFL GLEVYG GNW AI VFVPTRS  QI+ YARQ+FA
Sbjct:   16 VQLNGGRWTDEEHQGFLSGLEVYGHGNWNAIAVFVPTRSPPQIEAYARQYFA 67          
BLAST of mRNA_S-firma_M_contig946.20446.1 vs. uniprot
Match: D7G878_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G878_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 2.690e-18
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 ISRVQFNSGTWTVEEHQGFLRGLEVYGSGNWEAIGVFVPTRSSLQIQDYARQHFA 55
            I+ V FN GTWT  EHQGFLRGLEVYG GN +AIG+FVP+RS LQI+ YA+ +FA
Sbjct:   12 IAMVPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWYFA 66          
BLAST of mRNA_S-firma_M_contig946.20446.1 vs. uniprot
Match: A0A6H5JDE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE4_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 4.070e-18
Identity = 37/52 (71.15%), Postives = 42/52 (80.77%), Query Frame = 0
Query:    4 VQFNSGTWTVEEHQGFLRGLEVYGSGNWEAIGVFVPTRSSLQIQDYARQHFA 55
            V FN GTWT  EHQGFLRGLEVYG GN +AIG+FVP+RS LQI+ YA+ H A
Sbjct:   10 VPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWHLA 61          
BLAST of mRNA_S-firma_M_contig946.20446.1 vs. uniprot
Match: D7FPI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI5_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 2.420e-17
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 0
Query:    2 SRVQFNSGTWTVEEHQGFLRGLEVYGSGNWEAIGVFVPTRSSLQIQDYARQHFAGAGSVHQEEV 65
            +R+   +  WT +EH GFL GLEVYG GNW+AI VFVP+RSS QI+ YA+Q+ A   SVH  +V
Sbjct:    4 ARIPLTTEGWTEDEHNGFLHGLEVYGYGNWDAIAVFVPSRSSPQIEAYAQQYVAQGESVHSPQV 67          
BLAST of mRNA_S-firma_M_contig946.20446.1 vs. uniprot
Match: D7G877_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G877_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 3.810e-17
Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    3 RVQFNSGTWTVEEHQGFLRGLEVYGSGNWEAIGVFVPTRSSLQIQDYARQHFAGAGSVH 61
            RV  NSGTWT EEH+GFLRGLEVYG GNW A+ VFV +RS  QI+ YA+ + A   + H
Sbjct:    2 RVPLNSGTWTDEEHKGFLRGLEVYGHGNWNAMAVFVLSRSPPQIEAYAQDYMAEKETAH 60          
BLAST of mRNA_S-firma_M_contig946.20446.1 vs. uniprot
Match: D7G876_ECTSI (MYB DNA binding protein/ transcription factor-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G876_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 8.430e-16
Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    7 NSGTWTVEEHQGFLRGLEVYGSGNWEAIGVFVPTRSSLQIQDYARQHFA 55
            + G WT EEHQGFL GLEVYG GNW+AI VFVP+RS  QI+ YA+Q+ A
Sbjct:   22 SGGRWTDEEHQGFLHGLEVYGYGNWDAIAVFVPSRSPPQIEAYAQQYVA 70          
BLAST of mRNA_S-firma_M_contig946.20446.1 vs. uniprot
Match: A0A3L6G600_MAIZE (Transcription factor DIVARICATA n=3 Tax=Zea mays TaxID=4577 RepID=A0A3L6G600_MAIZE)

HSP 1 Score: 60.1 bits (144), Expect = 1.410e-8
Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 0
Query:   11 WTVEEHQGFLRGLEVYGSGNWEAIG-VFVPTRSSLQIQDYARQHF 54
            WT +EH+ FLRGLEVYG GNW+ I   FVPTR+ +QI  +A+++F
Sbjct:  158 WTQDEHKNFLRGLEVYGRGNWKNISKYFVPTRTPIQICSHAQKYF 202          
BLAST of mRNA_S-firma_M_contig946.20446.1 vs. uniprot
Match: A0A835ACZ8_9POAL (Uncharacterized protein n=2 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835ACZ8_9POAL)

HSP 1 Score: 57.8 bits (138), Expect = 8.030e-8
Identity = 26/57 (45.61%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    3 RVQFNSGTWTVEEHQGFLRGLEVYGSGNWEAIG-VFVPTRSSLQIQDYARQHFAGAG 58
            R++  +G WT  EH+ FLRGL VYG GNW+ I   FV TR+ +Q+  +A+++F   G
Sbjct:  120 RMERRTGFWTTAEHRLFLRGLHVYGRGNWKNISKYFVTTRTPVQVSSHAQKYFRRLG 176          
BLAST of mRNA_S-firma_M_contig946.20446.1 vs. uniprot
Match: K3XYL4_SETIT (Uncharacterized protein n=2 Tax=Setaria TaxID=4554 RepID=K3XYL4_SETIT)

HSP 1 Score: 57.0 bits (136), Expect = 1.450e-7
Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    5 QFNSGTWTVEEHQGFLRGLEVYGSGNWEAIG-VFVPTRSSLQIQDYARQHFAGAG 58
            +  +G WT+ EH+ FLRGL+VYG GNW+ I   FV TR+ +Q+  +A+++F   G
Sbjct:  122 RLRTGFWTMPEHRLFLRGLQVYGRGNWKNISKYFVTTRTPVQVSSHAQKYFRRIG 176          
BLAST of mRNA_S-firma_M_contig946.20446.1 vs. uniprot
Match: C5Z8F1_SORBI (Uncharacterized protein n=1 Tax=Sorghum bicolor TaxID=4558 RepID=C5Z8F1_SORBI)

HSP 1 Score: 57.0 bits (136), Expect = 1.570e-7
Identity = 22/45 (48.89%), Postives = 35/45 (77.78%), Query Frame = 0
Query:   11 WTVEEHQGFLRGLEVYGSGNWEAIGV-FVPTRSSLQIQDYARQHF 54
            WT++EH+ FLRGL VYG GNW+ I + FV T++ +Q+  +A+++F
Sbjct:  142 WTIDEHRQFLRGLHVYGRGNWKNISINFVTTKTPVQVSSHAQKYF 186          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig946.20446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K163_9PHAE1.340e-1975.00MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7G878_ECTSI2.690e-1869.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDE4_9PHAE4.070e-1871.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPI5_ECTSI2.420e-1756.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G877_ECTSI3.810e-1761.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G876_ECTSI8.430e-1667.35MYB DNA binding protein/ transcription factor-like... [more]
A0A3L6G600_MAIZE1.410e-857.78Transcription factor DIVARICATA n=3 Tax=Zea mays T... [more]
A0A835ACZ8_9POAL8.030e-845.61Uncharacterized protein n=2 Tax=Digitaria exilis T... [more]
K3XYL4_SETIT1.450e-745.45Uncharacterized protein n=2 Tax=Setaria TaxID=4554... [more]
C5Z8F1_SORBI1.570e-748.89Uncharacterized protein n=1 Tax=Sorghum bicolor Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 7..56
e-value: 4.1E-9
score: 46.3
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 9..53
e-value: 3.3E-10
score: 40.0
NoneNo IPR availableGENE3D1.10.10.60coord: 8..57
e-value: 4.3E-12
score: 48.0
NoneNo IPR availablePANTHERPTHR44191:SF12coord: 10..55
NoneNo IPR availablePANTHERPTHR44191FAMILY NOT NAMEDcoord: 10..55
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 4..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig946contigS-firma_M_contig946:25049..26184 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig946.20446.1mRNA_S-firma_M_contig946.20446.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig946 25049..26184 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig946.20446.1 ID=prot_S-firma_M_contig946.20446.1|Name=mRNA_S-firma_M_contig946.20446.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=89bp
ISRVQFNSGTWTVEEHQGFLRGLEVYGSGNWEAIGVFVPTRSSLQIQDYA
RQHFAGAGSVHQEEVAQSEGARSVSSAASRGGGGGGGSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR001005SANT/Myb