prot_S-firma_M_contig9443.20428.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9443.20428.1
Unique Nameprot_S-firma_M_contig9443.20428.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length253
Homology
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BLAST of mRNA_S-firma_M_contig9443.20428.1 vs. uniprot
Match: D7FU78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU78_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 9.430e-54
Identity = 185/270 (68.52%), Postives = 205/270 (75.93%), Query Frame = 0 
Query:    1 KLAERIPLKRHRPAGLRGKVAGSDDMFLDFDIDERDVPAHPPPGGNEVHLYQYYVQRLLCTVPRADRLRARTMEGRVPLRASRVKAHLDMFHNRKPYGDRCLLKETNYAYKVGHRNILESDVAVEEAIPGP----------VASGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------RTFQSFSGPCRAVVTFALFRSAAKGKGLKLQGHLPEKRLFEVEALEHNTLQQVM 253
            KLA+ IPLKR RP GL G++AGSDDM+LDFDIDE  VP  PP G ++V LYQYYVQR++  VPRA+ L+ RT EG VPLR  RVK  LD+  + KPYGD  LLKETN+  +     + E   +   A   P          VA+G A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       R FQSFSGP RAVVTFAL+RSAAKGKGL+L GHLPEKRLFEVEALEHNTLQQ+M
Sbjct:   90 KLAQCIPLKRQRPEGLVGRMAGSDDMYLDFDIDETTVPLEPPQGVSDVQLYQYYVQRIMSAVPRANSLKGRTTEGPVPLRICRVKNQLDIALS-KPYGDIHLLKETNHISEEKRHRVAEEAFSRSAAGEAPNSRDGVAAEAVANGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGALSGQRIFQSFSGPSRAVVTFALYRSAAKGKGLRLPGHLPEKRLFEVEALEHNTLQQIM 358
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BLAST of mRNA_S-firma_M_contig9443.20428.1 vs. uniprot
Match: A0A6H5KW97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW97_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.680e-22
Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0 
Query:  202 FQSFSGPCRAVVTFALFRSAAKGKGLKLQGHLPEKRLFEVEALEHNTLQQVM 253
            FQSFSGP RAVVTFAL+RSAAKGKGL+L GHLPEKRLFEVEALEHNTLQQVM
Sbjct:    2 FQSFSGPSRAVVTFALYRSAAKGKGLRLPGHLPEKRLFEVEALEHNTLQQVM 53
[Close]
BLAST of mRNA_S-firma_M_contig9443.20428.1 vs. uniprot
Match: A0A6H5KJY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJY6_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.380e-17
Identity = 40/67 (59.70%), Postives = 49/67 (73.13%), Query Frame = 0 
Query:   17 RGKVAGSDDMFLDFDIDERDVPAHPPPGGNEVHLYQYYVQRLLCTVPRADRLRARTMEGRVPLRASR 83
            R  +AGSDDM+LD+DIDE  VP  PP G ++V LYQYYVQR++  VPRA  L+ RT EG +PLR  R
Sbjct:   95 RTMMAGSDDMYLDYDIDETTVPPEPPQGVSDVQLYQYYVQRIMSAVPRAHSLKGRTTEGPIPLRICR 161
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9443.20428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FU78_ECTSI9.430e-5468.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW97_9PHAE2.680e-2292.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJY6_9PHAE2.380e-1759.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9443contigS-firma_M_contig9443:738..3897 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9443.20428.1mRNA_S-firma_M_contig9443.20428.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9443 738..3897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9443.20428.1 ID=prot_S-firma_M_contig9443.20428.1|Name=mRNA_S-firma_M_contig9443.20428.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=253bp
KLAERIPLKRHRPAGLRGKVAGSDDMFLDFDIDERDVPAHPPPGGNEVHL
YQYYVQRLLCTVPRADRLRARTMEGRVPLRASRVKAHLDMFHNRKPYGDR
CLLKETNYAYKVGHRNILESDVAVEEAIPGPVASGVAAAGGSVAAERGSA
ARGGGAATATRAAVGEAGGSSSISSSSGGGGGARSATAAAPSATAGGGGR
TFQSFSGPCRAVVTFALFRSAAKGKGLKLQGHLPEKRLFEVEALEHNTLQ
QVM
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